Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0026733 Camellia sinensis var. sinensis HOM05D005986 ORTHO05D007467 3.6e-42 174.5 86 100.0
Lj3A1079G52 Lonicera japonica HOM05D005986 ORTHO05D007467 3.8e-20 101.3 53 92.5
vmacro15979 Vaccinium macrocarpon HOM05D005986 ORTHO05D007467 8.5e-20 100.1 53 92.5
Actinidia33985 Actinidia chinensis HOM05D005986 ORTHO05D007467 2.5e-19 98.6 53 90.6
Dinv07612 Davidia involucrata HOM05D005986 ORTHO05D007467 1.2e-18 96.3 53 84.9
Cc11_g14820 Coffea canephora HOM05D005986 ORTHO05D007467 2.7e-18 95.1 53 84.9
Haze_12546 Corylus avellana HOM05D005986 ORTHO05D007467 3.6e-18 94.7 53 86.8
Glyma.08G265400 Glycine max HOM05D005986 ORTHO05D007467 3.6e-18 94.7 60 76.7
Hma1.2p1_0562F.1_g179030 Hydrangea macrophylla HOM05D005986 ORTHO05D007467 3.6e-18 94.7 53 86.8
Hma1.2p1_1356F.1_g277880 Hydrangea macrophylla HOM05D005986 ORTHO05D007467 3.6e-18 94.7 53 86.8
Hma1.2p1_1356F.1_g277890 Hydrangea macrophylla HOM05D005986 ORTHO05D007467 3.6e-18 94.7 53 86.8
Manes.08G097800 Manihot esculenta HOM05D005986 ORTHO05D007467 3.6e-18 94.7 53 83.0
Potri.001G072400 Populus trichocarpa HOM05D005986 ORTHO05D007467 3.6e-18 94.7 53 86.8
Ca_22545_v3 Cicer arietinum L. HOM05D005986 ORTHO05D007467 4.7e-18 94.4 55 83.6
Ciclev10028467m.g Citrus clementina HOM05D005986 ORTHO05D007467 4.7e-18 94.4 53 86.8
ClCG10G013170 Citrullus lanatus HOM05D005986 ORTHO05D007467 8.0e-18 93.6 53 86.8
CsaV3_3G043440 Cucumis sativus L. HOM05D005986 ORTHO05D007467 8.0e-18 93.6 53 84.9
MD16G1131100 Malus domestica HOM05D005986 ORTHO05D007467 8.0e-18 93.6 53 84.9
Potri.003G158400 Populus trichocarpa HOM05D005986 ORTHO05D007467 8.0e-18 93.6 53 84.9
HanXRQChr17g0540591 Helianthus annuus HOM05D005986 ORTHO05D007467 1.0e-17 93.2 53 83.0
THA.LOC104807194 Tarenaya hassleriana HOM05D005986 ORTHO05D007467 1.0e-17 93.2 53 83.0
Eucgr.B03577 Eucalyptus grandis HOM05D005986 ORTHO05D007467 1.4e-17 92.8 53 84.9
CANSAT56G1851 Cannabis sativa HOM05D005986 ORTHO05D007467 1.8e-17 92.4 53 84.9
MELO3C026759.2 Cucumis melo HOM05D005986 ORTHO05D007467 1.8e-17 92.4 53 83.0
PGR102G0450 Punica granatum HOM05D005986 ORTHO05D007467 1.8e-17 92.4 53 84.9
Oeu056144.2 Olea europaea HOM05D005986 ORTHO05D007467 2.3e-17 92.0 53 83.0
Solyc01g008070.3 Solanum lycopersicum HOM05D005986 ORTHO05D007467 2.3e-17 92.0 53 83.0
Sopen01g003630 Solanum pennellii HOM05D005986 ORTHO05D007467 2.3e-17 92.0 53 83.0
PGSC0003DMG401016404 Solanum tuberosum HOM05D005986 ORTHO05D007467 2.3e-17 92.0 53 83.0
GSVIVG01001142001 Vitis vinifera HOM05D005986 ORTHO05D007467 2.3e-17 92.0 53 83.0
COL.COLO4_04222 Corchorus olitorius HOM05D005986 ORTHO05D007467 3.0e-17 91.7 53 83.0
COL.COLO4_06172 Corchorus olitorius HOM05D005986 ORTHO05D007467 3.0e-17 91.7 53 83.0
FAN07G2431 Fragaria x ananassa HOM05D005986 ORTHO05D007467 3.0e-17 91.7 53 83.0
QL03p046965 Quercus lobata HOM05D005986 ORTHO05D007467 3.0e-17 91.7 53 83.0
RcHm_v2.0_Chr4g0428161 Rosa chinensis HOM05D005986 ORTHO05D007467 3.0e-17 91.7 53 81.1
Actinidia13521 Actinidia chinensis HOM05D005986 ORTHO05D007467 4.0e-17 91.3 48 91.7
Gohir.A12G086500 Gossypium hirsutum HOM05D005986 ORTHO05D007467 4.0e-17 91.3 53 83.0
Medtr8g070480 Medicago truncatula HOM05D005986 ORTHO05D007467 4.0e-17 91.3 55 80.0
Prupe.1G209800 Prunus persica HOM05D005986 ORTHO05D007467 4.0e-17 91.3 53 83.0
Sabra01G0051000 Salix brachista HOM05D005986 ORTHO05D007467 4.0e-17 91.3 53 83.0
TAR371G0853 Trochodendron aralioides HOM05D005986 ORTHO05D007467 4.0e-17 91.3 53 83.0
Lj4g0000342 Lotus japonicus HOM05D005986 ORTHO05D007467 5.2e-17 90.9 55 80.0
Sabra03G0114800 Salix brachista HOM05D005986 ORTHO05D007467 5.2e-17 90.9 51 84.3
Thecc.01G233000 Theobroma cacao HOM05D005986 ORTHO05D007467 5.2e-17 90.9 53 81.1
VMungo0251G3786 Vigna mungo HOM05D005986 ORTHO05D007467 5.2e-17 90.9 53 83.0
Atru.chr12.1489 Acer truncatum HOM05D005986 ORTHO05D007467 6.8e-17 90.5 53 81.1
Sed0002782 Sechium edule HOM05D005986 ORTHO05D007467 6.8e-17 90.5 53 83.0
TWI36G0919 Tripterygium wilfordii HOM05D005986 ORTHO05D007467 6.8e-17 90.5 53 81.1
FvH4_4g21940 Fragaria vesca HOM05D005986 ORTHO05D007467 8.8e-17 90.1 53 81.1
Gorai.008G095500 Gossypium raimondii HOM05D005986 ORTHO05D007467 8.8e-17 90.1 53 81.1
Sed0000271 Sechium edule HOM05D005986 ORTHO05D007467 8.8e-17 90.1 53 83.0
AUR62042784 Chenopodium quinoa HOM05D005986 ORTHO05D007467 1.2e-16 89.7 50 84.0
Duzib147G0525 Durio zibethinus HOM05D005986 ORTHO05D007467 1.2e-16 89.7 51 82.4
Gohir.D12G085100 Gossypium hirsutum HOM05D005986 ORTHO05D007467 1.2e-16 89.7 53 81.1
MD13G1135500 Malus domestica HOM05D005986 ORTHO05D007467 1.2e-16 89.7 53 81.1
arahy.Tifrunner.gnm1.ann1.946FET Arachis hypogaea HOM05D005986 ORTHO05D007467 1.5e-16 89.4 55 78.2
AT5G47860 Arabidopsis thaliana HOM05D005986 ORTHO05D007467 2.0e-16 89.0 53 81.1
arahy.Tifrunner.gnm1.ann1.7WS5BD Arachis hypogaea HOM05D005986 ORTHO05D007467 2.0e-16 89.0 55 78.2
CiPaw.05G096500 Carya illinoinensis HOM05D005986 ORTHO05D007467 2.0e-16 89.0 53 81.1
FAN12G1445 Fragaria x ananassa HOM05D005986 ORTHO05D007467 2.0e-16 89.0 50 84.0
HanXRQChr06g0175331 Helianthus annuus HOM05D005986 ORTHO05D007467 2.0e-16 89.0 52 80.8
Lalb_Chr16g0391881 Lupinus albus HOM05D005986 ORTHO05D007467 2.0e-16 89.0 55 78.2
Nitab4.5_0000069g0470 Nicotiana tabacum HOM05D005986 ORTHO05D007467 2.0e-16 89.0 53 79.2
Aa31LG3G14160 Aethionema arabicum HOM05D005986 ORTHO05D007467 2.6e-16 88.6 53 81.1
AL8G19850 Arabidopsis lyrata HOM05D005986 ORTHO05D007467 2.6e-16 88.6 53 81.1
A06p39510 Brassica napus HOM05D005986 ORTHO05D007467 2.6e-16 88.6 53 81.1
C07p38760 Brassica napus HOM05D005986 ORTHO05D007467 2.6e-16 88.6 53 81.1
BolC7t44395H Brassica oleracea HOM05D005986 ORTHO05D007467 2.6e-16 88.6 53 81.1
BraA06t26866Z Brassica rapa HOM05D005986 ORTHO05D007467 2.6e-16 88.6 53 81.1
Carub.0008s0731 Capsella rubella HOM05D005986 ORTHO05D007467 2.6e-16 88.6 53 81.1
Thhalv10004270m.g Eutrema salsugineum HOM05D005986 ORTHO05D007467 2.6e-16 88.6 53 81.1
Nn4g22038 Nelumbo nucifera HOM05D005986 ORTHO05D007467 2.6e-16 88.6 53 81.1
EL10Ac4g08348 Beta vulgaris HOM05D005986 ORTHO05D007467 3.4e-16 88.2 50 84.0
CAN.G282.72 Capsicum annuum HOM05D005986 ORTHO05D007467 3.4e-16 88.2 53 79.2
CARHR184430 Cardamine hirsuta HOM05D005986 ORTHO05D007467 3.4e-16 88.2 53 81.1
AUR62019578 Chenopodium quinoa HOM05D005986 ORTHO05D007467 3.4e-16 88.2 50 84.0
Lsat_1_v5_gn_3_33381 Lactuca sativa HOM05D005986 ORTHO05D007467 3.4e-16 88.2 53 77.4
Phvul.003G273800 Phaseolus vulgaris HOM05D005986 ORTHO05D007467 3.4e-16 88.2 53 81.1
Sc11g0000020 Simmondsia chinensis HOM05D005986 ORTHO05D007467 3.4e-16 88.2 53 79.2
Nitab4.5_0002199g0020 Nicotiana tabacum HOM05D005986 ORTHO05D007467 4.4e-16 87.8 53 77.4
ATR0582G342 Amborella trichopoda HOM05D005986 ORTHO05D007467 7.5e-16 87.0 53 79.2
ECA246G5024 Erigeron canadensis HOM05D005986 ORTHO05D007467 9.8e-16 86.7 53 81.1
PSO017G0169 Papaver somniferum HOM05D005986 ORTHO05D007467 9.8e-16 86.7 53 75.5
PSO478G1012 Papaver somniferum HOM05D005986 ORTHO05D007467 9.8e-16 86.7 53 75.5
Aqoxy1G00505 Aquilegia oxysepala HOM05D005986 ORTHO05D007467 1.3e-15 86.3 53 79.2
Peaxi162Scf00097g01214 Petunia axillaris HOM05D005986 ORTHO05D007467 1.3e-15 86.3 53 77.4
unitig_747.g21105 Utricularia gibba HOM05D005986 ORTHO05D007467 1.7e-15 85.9 53 77.4
CDE02G3075 Ceratophyllum demersum HOM05D005986 ORTHO05D007467 2.2e-15 85.5 53 75.5
Gohir.A09G003100 Gossypium hirsutum HOM05D005986 ORTHO05D007467 2.2e-15 85.5 53 75.5
Gohir.D09G002900 Gossypium hirsutum HOM05D005986 ORTHO05D007467 2.2e-15 85.5 53 75.5
HPP92_001278 Vanilla planifolia HOM05D005986 ORTHO05D007467 2.2e-15 85.5 53 77.4
Gorai.006G003600 Gossypium raimondii HOM05D005986 ORTHO05D007467 2.8e-15 85.1 53 73.6
Sp2g18360 Schrenkiella parvula HOM05D005986 ORTHO05D007467 2.8e-15 85.1 53 79.2
MSTRG.8073 Avicennia marina HOM05D005986 ORTHO05D007467 3.7e-15 84.7 53 75.5
SGA_v2.0_scaffold258G45750 Striga asiatica HOM05D005986 ORTHO05D007467 6.3e-15 84.0 53 79.2
Os04g0405600 Oryza sativa ssp. japonica HOM05D005986 ORTHO05D007467 8.3e-15 83.6 53 73.6
SEGI_07632 Sequoiadendron giganteum HOM05D005986 ORTHO05D007467 1.8e-14 82.4 53 69.8
Lsat_1_v5_gn_1_109040 Lactuca sativa HOM05D005986 ORTHO05D007467 2.4e-14 82.0 58 65.5
Lsat_1_v5_gn_5_29241 Lactuca sativa HOM05D005986 ORTHO05D007467 2.4e-14 82.0 55 67.3
Zm00001eb084350 Zea mays HOM05D005986 ORTHO05D007467 2.4e-14 82.0 53 69.8
TAR627G0548 Trochodendron aralioides HOM05D005986 ORTHO05D007467 4.1e-14 81.3 53 71.7
CDE06G1414 Ceratophyllum demersum HOM05D005986 ORTHO05D007467 1.6e-13 79.3 53 73.6
AagrBONN_evm.TU.Sc2ySwM_228.1585 Anthoceros agrestis HOM05D005986 ORTHO05D007467 2.0e-13 79.0 50 70.0
Migut.K01148 Erythranthe guttata HOM05D005986 ORTHO05D007467 5.9e-13 77.4 53 69.8
Migut.H01175 Erythranthe guttata HOM05D005986 ORTHO05D007467 3.3e-11 71.6 51 66.7
SMO145G0091 Selaginella moellendorffii HOM05D005986 ORTHO05D007467 3.3e-11 71.6 53 64.2
Cpa.g.sc102.15 Carica papaya HOM05D005986 ORTHO05D007467 8.0e-10 67.0 40 77.5
TPR.G6140 Trifolium pratense HOM05D005986 ORTHO05D007467 1.4e-09 66.2 55 65.5
Pp3c24_14070 Physcomitrium patens HOM05D005986 ORTHO05D007467 8.9e-09 63.5 49 59.2
DCAR_006993 Daucus carota HOM05D005986 ORTHO05D007467 5.4e-06 54.3 34 73.5
Cre01.g000900 Chlamydomonas reinhardtii HOM05D005986 ORTHO05D007467 9.2e-06 53.5 49 53.1


User provided reference genes

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