Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0026693 Camellia sinensis var. sinensis HOM05D006958 ORTHO05D008814 3.1e-198 694.9 343 100.0
CSS0020437 Camellia sinensis var. sinensis HOM05D006958 ORTHO05D008814 3.7e-191 671.4 346 97.1
Dinv39219 Davidia involucrata HOM05D006958 ORTHO05D008814 3.6e-154 548.5 341 80.9
Actinidia10201 Actinidia chinensis HOM05D006958 ORTHO05D008814 5.8e-152 541.2 341 80.6
Rhsim06G0062400 Rhododendron simsii HOM05D006958 ORTHO05D008814 4.6e-149 531.6 347 79.0
Actinidia22696 Actinidia chinensis HOM05D006958 ORTHO05D008814 2.1e-146 522.7 339 78.8
Thecc.08G088500 Theobroma cacao HOM05D006958 ORTHO05D008814 3.6e-130 468.8 342 71.1
TAR376G0445 Trochodendron aralioides HOM05D006958 ORTHO05D008814 4.5e-128 461.8 350 67.4
Atru.chr13.835 Acer truncatum HOM05D006958 ORTHO05D008814 1.3e-127 460.3 342 68.1
COL.COLO4_28503 Corchorus olitorius HOM05D006958 ORTHO05D008814 1.1e-126 457.2 340 70.0
Gorai.009G220300 Gossypium raimondii HOM05D006958 ORTHO05D008814 2.1e-125 453.0 343 70.0
TWI12G1073 Tripterygium wilfordii HOM05D006958 ORTHO05D008814 6.0e-125 451.4 342 65.5
Gohir.D05G213600 Gossypium hirsutum HOM05D006958 ORTHO05D008814 3.9e-124 448.7 345 69.3
Duzib093G1923 Durio zibethinus HOM05D006958 ORTHO05D008814 8.7e-124 447.6 342 68.7
Lj4A758G77 Lonicera japonica HOM05D006958 ORTHO05D008814 8.7e-124 447.6 377 60.7
Manes.18G046700 Manihot esculenta HOM05D006958 ORTHO05D008814 1.5e-123 446.8 343 65.3
Migut.N02783 Erythranthe guttata HOM05D006958 ORTHO05D008814 2.8e-122 442.6 346 63.0
Prupe.1G422600 Prunus persica HOM05D006958 ORTHO05D008814 8.1e-122 441.0 350 64.9
Potri.002G118300 Populus trichocarpa HOM05D006958 ORTHO05D008814 3.1e-121 439.1 342 65.5
Ciclev10001733m.g Citrus clementina HOM05D006958 ORTHO05D008814 1.2e-120 437.2 340 65.6
CANSAT25G3409 Cannabis sativa HOM05D006958 ORTHO05D008814 4.9e-119 431.8 343 64.4
Nitab4.5_0004654g0020 Nicotiana tabacum HOM05D006958 ORTHO05D008814 1.1e-118 430.6 344 65.7
MD15G1069100 Malus domestica HOM05D006958 ORTHO05D008814 4.2e-118 428.7 343 63.6
Nitab4.5_0002484g0050 Nicotiana tabacum HOM05D006958 ORTHO05D008814 7.1e-118 427.9 344 65.4
Sc02g0007890 Simmondsia chinensis HOM05D006958 ORTHO05D008814 7.1e-118 427.9 338 65.4
MSTRG.24376 Avicennia marina HOM05D006958 ORTHO05D008814 2.7e-117 426.0 346 61.3
SGA_v2.0_scaffold28G11833 Striga asiatica HOM05D006958 ORTHO05D008814 4.6e-117 425.2 338 63.0
CARHR283790 Cardamine hirsuta HOM05D006958 ORTHO05D008814 1.0e-116 424.1 343 65.3
FvH4_2g33060 Fragaria vesca HOM05D006958 ORTHO05D008814 1.8e-116 423.3 339 63.4
THA.LOC104816754 Tarenaya hassleriana HOM05D006958 ORTHO05D008814 2.3e-116 422.9 345 63.5
RcHm_v2.0_Chr6g0309651 Rosa chinensis HOM05D006958 ORTHO05D008814 3.9e-116 422.2 346 63.6
Solyc04g077820.4 Solanum lycopersicum HOM05D006958 ORTHO05D008814 3.9e-116 422.2 344 64.5
FAN24G2490 Fragaria x ananassa HOM05D006958 ORTHO05D008814 5.1e-116 421.8 343 63.0
Hund05299 Selenicereus undatus HOM05D006958 ORTHO05D008814 5.1e-116 421.8 343 63.8
Lsat_1_v5_gn_6_110920 Lactuca sativa HOM05D006958 ORTHO05D008814 1.9e-115 419.9 356 62.4
Sopen04g031420 Solanum pennellii HOM05D006958 ORTHO05D008814 2.5e-115 419.5 346 63.9
Thhalv10023590m.g Eutrema salsugineum HOM05D006958 ORTHO05D008814 1.3e-114 417.2 341 63.9
HanXRQChr08g0229631 Helianthus annuus HOM05D006958 ORTHO05D008814 4.8e-114 415.2 344 63.7
Lalb_Chr14g0368181 Lupinus albus HOM05D006958 ORTHO05D008814 4.8e-114 415.2 345 62.6
QL12p038133 Quercus lobata HOM05D006958 ORTHO05D008814 6.2e-114 414.8 352 61.4
FAN20G1263 Fragaria x ananassa HOM05D006958 ORTHO05D008814 1.1e-113 414.1 353 60.6
FAN27G0228 Fragaria x ananassa HOM05D006958 ORTHO05D008814 1.4e-113 413.7 346 61.8
CiPaw.07G174600 Carya illinoinensis HOM05D006958 ORTHO05D008814 1.8e-113 413.3 350 63.4
FAN15G0662 Fragaria x ananassa HOM05D006958 ORTHO05D008814 6.9e-113 411.4 342 62.0
Cfa013775 Carpinus fangiana HOM05D006958 ORTHO05D008814 9.0e-113 411.0 349 61.3
CAN.G724.27 Capsicum annuum HOM05D006958 ORTHO05D008814 1.2e-112 410.6 344 63.1
Haze_22433 Corylus avellana HOM05D006958 ORTHO05D008814 1.5e-112 410.2 348 60.6
AT1G59600 Arabidopsis thaliana HOM05D006958 ORTHO05D008814 2.0e-112 409.8 342 63.5
AL2G17470 Arabidopsis lyrata HOM05D006958 ORTHO05D008814 3.4e-112 409.1 342 63.7
MBI16_g23890_MAGBIO Magnolia biondii HOM05D006958 ORTHO05D008814 7.6e-112 407.9 347 63.1
Carub.0002s0585 Capsella rubella HOM05D006958 ORTHO05D008814 2.2e-111 406.4 344 63.7
Eucgr.F02250 Eucalyptus grandis HOM05D006958 ORTHO05D008814 2.9e-111 406.0 351 60.1
arahy.Tifrunner.gnm1.ann1.JFD9T8 Arachis hypogaea HOM05D006958 ORTHO05D008814 4.2e-110 402.1 343 59.2
ClCG08G016520 Citrullus lanatus HOM05D006958 ORTHO05D008814 9.3e-110 401.0 340 60.9
Peaxi162Scf00081g02114 Petunia axillaris HOM05D006958 ORTHO05D008814 1.2e-109 400.6 343 60.9
Lj5g0000926 Lotus japonicus HOM05D006958 ORTHO05D008814 2.7e-109 399.4 339 59.9
Sp2g04980 Schrenkiella parvula HOM05D006958 ORTHO05D008814 4.6e-109 398.7 342 62.0
PGSC0003DMG400010608 Solanum tuberosum HOM05D006958 ORTHO05D008814 2.3e-108 396.4 349 61.0
PGR031G1511 Punica granatum HOM05D006958 ORTHO05D008814 6.7e-108 394.8 348 60.6
C01p36350 Brassica napus HOM05D006958 ORTHO05D008814 1.3e-106 390.6 339 60.2
Glyma.14G089018 Glycine max HOM05D006958 ORTHO05D008814 1.8e-105 386.7 339 61.9
CsaV3_2G026090 Cucumis sativus L. HOM05D006958 ORTHO05D008814 3.1e-105 386.0 342 59.6
Ca_13215_v3 Cicer arietinum L. HOM05D006958 ORTHO05D008814 4.1e-105 385.6 333 60.1
BolC1t03593H Brassica oleracea HOM05D006958 ORTHO05D008814 2.6e-104 382.9 340 59.7
Sed0002112 Sechium edule HOM05D006958 ORTHO05D008814 3.4e-104 382.5 340 59.1
MELO3C010802.2 Cucumis melo HOM05D006958 ORTHO05D008814 8.5e-103 377.9 342 58.8
TPR.G37796 Trifolium pratense HOM05D006958 ORTHO05D008814 1.1e-102 377.5 338 59.8
A01p28700 Brassica napus HOM05D006958 ORTHO05D008814 3.2e-102 375.9 339 58.4
Gohir.A05G210300 Gossypium hirsutum HOM05D006958 ORTHO05D008814 9.4e-102 374.4 276 72.1
BraA01t03033Z Brassica rapa HOM05D006958 ORTHO05D008814 1.6e-101 373.6 339 58.1
PSO675G0096 Papaver somniferum HOM05D006958 ORTHO05D008814 2.1e-101 373.2 348 57.5
Cpa.g.sc142.28 Carica papaya HOM05D006958 ORTHO05D008814 2.7e-101 372.9 274 69.0
ATR0739G011 Amborella trichopoda HOM05D006958 ORTHO05D008814 4.6e-101 372.1 347 57.1
Aa31LG2G10550 Aethionema arabicum HOM05D006958 ORTHO05D008814 6.1e-101 371.7 427 50.4
PSO541G2153 Papaver somniferum HOM05D006958 ORTHO05D008814 1.0e-100 370.9 346 57.8
ECA246G2880 Erigeron canadensis HOM05D006958 ORTHO05D008814 1.4e-100 370.5 285 66.7
Aqoxy6G02602 Aquilegia oxysepala HOM05D006958 ORTHO05D008814 5.7e-99 365.2 351 54.7
unitig_744.g24127 Utricularia gibba HOM05D006958 ORTHO05D008814 7.4e-99 364.8 328 57.0
arahy.Tifrunner.gnm1.ann1.8TQ0W2 Arachis hypogaea HOM05D006958 ORTHO05D008814 3.7e-98 362.5 343 56.0
Medtr1g018000 Medicago truncatula HOM05D006958 ORTHO05D008814 1.8e-97 360.1 342 58.5
DCAR_020049 Daucus carota HOM05D006958 ORTHO05D008814 2.4e-97 359.8 336 56.8
Phvul.001G028000 Phaseolus vulgaris HOM05D006958 ORTHO05D008814 5.3e-97 358.6 345 55.7
BcaB04g20216 Brassica carinata HOM05D006958 ORTHO05D008814 2.6e-96 356.3 346 55.5
HPP92_009523 Vanilla planifolia HOM05D006958 ORTHO05D008814 7.2e-94 348.2 345 55.7
PSO541G3524 Papaver somniferum HOM05D006958 ORTHO05D008814 2.1e-93 346.7 341 55.1
VMungo0647G0836 Vigna mungo HOM05D006958 ORTHO05D008814 3.9e-92 342.4 330 54.2
EL10Ac1g02379 Beta vulgaris HOM05D006958 ORTHO05D008814 2.4e-89 333.2 274 61.7
GSVIVG01009341001 Vitis vinifera HOM05D006958 ORTHO05D008814 1.6e-80 303.9 211 72.0
Zm00001eb325900 Zea mays HOM05D006958 ORTHO05D008814 1.7e-79 300.4 352 48.6
Cc10_g05800 Coffea canephora HOM05D006958 ORTHO05D008814 7.2e-78 295.0 212 69.3
Pp3c12_1620 Physcomitrium patens HOM05D006958 ORTHO05D008814 4.4e-67 259.2 326 42.9
CDE04G0359 Ceratophyllum demersum HOM05D006958 ORTHO05D008814 1.9e-62 243.8 233 57.5
Psat6g018160 Pisum sativum HOM05D006958 ORTHO05D008814 6.8e-60 235.3 296 48.3
Oeu049903.1 Olea europaea HOM05D006958 ORTHO05D008814 4.5e-56 222.6 174 59.8
AUR62022479 Chenopodium quinoa HOM05D006958 ORTHO05D008814 8.9e-52 208.4 178 59.0
HPP92_009559 Vanilla planifolia HOM05D006958 ORTHO05D008814 2.3e-44 183.7 187 54.0
arahy.Tifrunner.gnm1.ann1.D1UQZZ Arachis hypogaea HOM05D006958 ORTHO05D008814 2.7e-40 170.2 271 38.0
SMO334G0101 Selaginella moellendorffii HOM05D006958 ORTHO05D008814 2.8e-37 160.2 265 36.6
CBR_g51257 Chara braunii HOM05D006958 ORTHO05D008814 4.7e-37 159.5 309 33.7
Os01g0593100 Oryza sativa ssp. japonica HOM05D006958 ORTHO05D008814 7.6e-35 152.1 201 44.3
Os07g0586000 Oryza sativa ssp. japonica HOM05D006958 ORTHO05D008814 9.9e-35 151.8 170 48.2
AUR62022480 Chenopodium quinoa HOM05D006958 ORTHO05D008814 7.1e-33 145.6 128 57.8
BolC4t24190H Brassica oleracea HOM05D006958 ORTHO05D008814 4.3e-30 136.3 129 57.4
SEGI_02529 Sequoiadendron giganteum HOM05D006958 ORTHO05D008814 7.3e-30 135.6 168 40.5
MBI15_g25904_MAGBIO Magnolia biondii HOM05D006958 ORTHO05D017181 3.1e-28 130.2 126 58.7
C04p26140 Brassica napus HOM05D006958 ORTHO05D008814 5.1e-23 112.8 111 55.9
Cfa010280 Carpinus fangiana HOM05D006958 ORTHO05D008814 1.1e-20 105.1 93 59.1
BcaC02g10644 Brassica carinata HOM05D006958 ORTHO05D008814 3.1e-20 103.6 145 43.4
Psat7g107960 Pisum sativum HOM05D006958 ORTHO05D008814 8.7e-15 85.5 104 45.2
SEGI_26692 Sequoiadendron giganteum HOM05D006958 ORTHO05D008814 3.3e-14 83.6 73 50.7
Nn5g30604 Nelumbo nucifera HOM05D006958 ORTHO05D008814 9.0e-12 75.5 79 50.6
EL10Ac1g02376 Beta vulgaris HOM05D006958 ORTHO05D008814 1.2e-11 75.1 66 57.6
Glyma.07G264001 Glycine max HOM05D006958 ORTHO05D008814 2.6e-11 73.9 82 52.4
HPP92_009560 Vanilla planifolia HOM05D001084 ORTHO05D001275 7.6e-11 72.4 62 59.7
Ah.09g227430 Amaranthus hybridus HOM05D006958 ORTHO05D008814 1.4e-09 68.2 67 50.7
AUR62017930 Chenopodium quinoa HOM05D061994 ORTHO05D138367 3.0e-07 60.5 253 26.9
Psat0s3396g0160 Pisum sativum HOM05D006958 ORTHO05D008814 1.9e-06 57.8 37 64.9


User provided reference genes

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