Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0026672 Camellia sinensis var. sinensis HOM05D006283 ORTHO05D007727 2.1e-118 429.1 223 100.0
CSS0022675 Camellia sinensis var. sinensis HOM05D006283 ORTHO05D007727 1.2e-73 280.4 184 86.4
Peaxi162Scf00126g00003 Petunia axillaris HOM05D006283 ORTHO05D007727 2.8e-14 83.2 47 78.7
TAR362G0864 Trochodendron aralioides HOM05D006283 ORTHO05D007727 4.2e-10 69.3 78 50.0
Peaxi162Scf00126g00015 Petunia axillaris HOM05D006283 ORTHO05D007727 7.1e-10 68.6 76 48.7
Atru.chr3.1494 Acer truncatum HOM05D006283 ORTHO05D007727 9.3e-10 68.2 77 50.6
Lsat_1_v5_gn_4_30241 Lactuca sativa HOM05D006283 ORTHO05D007727 1.2e-09 67.8 88 44.3
Nitab4.5_0000130g0340 Nicotiana tabacum HOM05D006283 ORTHO05D007727 1.6e-09 67.4 79 45.6
COL.COLO4_07661 Corchorus olitorius HOM05D006283 ORTHO05D007727 2.7e-09 66.6 74 52.7
Lj3A196T13 Lonicera japonica HOM05D006283 ORTHO05D007727 2.7e-09 66.6 34 91.2
Dinv22729 Davidia involucrata HOM05D006283 ORTHO05D007727 3.5e-09 66.2 78 48.7
Hma1.2p1_0847F.1_g227833 Hydrangea macrophylla HOM05D006283 ORTHO05D007727 4.6e-09 65.9 77 48.1
Gohir.A10G137000 Gossypium hirsutum HOM05D006283 ORTHO05D007727 6.0e-09 65.5 79 48.1
Gohir.D10G129700 Gossypium hirsutum HOM05D006283 ORTHO05D007727 7.9e-09 65.1 74 50.0
Gorai.011G143000 Gossypium raimondii HOM05D006283 ORTHO05D007727 7.9e-09 65.1 74 50.0
QL10p048749 Quercus lobata HOM05D006283 ORTHO05D007727 7.9e-09 65.1 78 47.4
PGSC0003DMG400030791 Solanum tuberosum HOM05D006283 ORTHO05D007727 1.0e-08 64.7 73 47.9
vmacro00624 Vaccinium macrocarpon HOM05D006283 ORTHO05D007727 1.0e-08 64.7 64 56.2
Duzib151G0050 Durio zibethinus HOM05D006283 ORTHO05D007727 1.3e-08 64.3 74 50.0
Migut.N02075 Erythranthe guttata HOM05D006283 ORTHO05D007727 1.3e-08 64.3 74 50.0
Manes.11G120300 Manihot esculenta HOM05D006283 ORTHO05D007727 1.3e-08 64.3 74 50.0
Solyc06g054450.3 Solanum lycopersicum HOM05D006283 ORTHO05D007727 1.3e-08 64.3 73 46.6
Sopen06g019520 Solanum pennellii HOM05D006283 ORTHO05D007727 1.3e-08 64.3 73 46.6
Actinidia35975 Actinidia chinensis HOM05D006283 ORTHO05D007727 1.8e-08 63.9 78 48.7
Cc03_g13090 Coffea canephora HOM05D006283 ORTHO05D007727 1.8e-08 63.9 78 46.2
Prupe.1G192800 Prunus persica HOM05D006283 ORTHO05D007727 1.8e-08 63.9 74 48.6
PGR142G0689 Punica granatum HOM05D006283 ORTHO05D007727 1.8e-08 63.9 78 47.4
Rhsim09G0027900 Rhododendron simsii HOM05D006283 ORTHO05D007727 1.8e-08 63.9 108 41.7
Duzib268G1109 Durio zibethinus HOM05D006283 ORTHO05D007727 2.3e-08 63.5 74 48.6
Hma1.2p1_0639F.1_g194055 Hydrangea macrophylla HOM05D006283 ORTHO05D007727 2.3e-08 63.5 84 44.0
Hma1.2p1_0847F.1_g227840 Hydrangea macrophylla HOM05D006283 ORTHO05D007727 2.3e-08 63.5 84 44.0
Oeu034461.3 Olea europaea HOM05D006283 ORTHO05D007727 2.3e-08 63.5 74 48.6
GSVIVG01010753001 Vitis vinifera HOM05D006283 ORTHO05D007727 2.3e-08 63.5 31 93.5
CAN.G1247.5 Capsicum annuum HOM05D006283 ORTHO05D007727 3.0e-08 63.2 73 45.2
CiPaw.02G054900 Carya illinoinensis HOM05D006283 ORTHO05D007727 3.0e-08 63.2 74 47.3
Haze_01514 Corylus avellana HOM05D006283 ORTHO05D007727 3.0e-08 63.2 31 90.3
Thecc.04G180000 Theobroma cacao HOM05D006283 ORTHO05D007727 3.0e-08 63.2 74 51.4
arahy.Tifrunner.gnm1.ann1.7GR0QN Arachis hypogaea HOM05D006283 ORTHO05D007727 5.1e-08 62.4 87 40.2
ECA234G3618 Erigeron canadensis HOM05D006283 ORTHO05D007727 5.1e-08 62.4 78 43.6
HanXRQChr16g0525531 Helianthus annuus HOM05D006283 ORTHO05D007727 5.1e-08 62.4 88 40.9
Potri.019G051300 Populus trichocarpa HOM05D006283 ORTHO05D007727 5.1e-08 62.4 74 47.3
Sp5g03750 Schrenkiella parvula HOM05D006283 ORTHO05D007727 5.1e-08 62.4 86 45.3
Lj3g0020373 Lotus japonicus HOM05D006283 ORTHO05D007727 6.7e-08 62.0 79 44.3
Actinidia34602 Actinidia chinensis HOM05D006283 ORTHO05D007727 8.7e-08 61.6 42 73.8
Nn1g09881 Nelumbo nucifera HOM05D006283 ORTHO05D007727 8.7e-08 61.6 79 44.3
VMungo1127G0333 Vigna mungo HOM05D006283 ORTHO05D007727 8.7e-08 61.6 80 41.2
BcaC08g44981 Brassica carinata HOM05D006283 ORTHO05D007727 1.1e-07 61.2 75 45.3
A07p24630 Brassica napus HOM05D006283 ORTHO05D007727 1.1e-07 61.2 86 44.2
CARHR169780 Cardamine hirsuta HOM05D006283 ORTHO05D007727 1.1e-07 61.2 74 45.9
Thhalv10006168m.g Eutrema salsugineum HOM05D006283 ORTHO05D007727 1.1e-07 61.2 74 44.6
Phvul.011G054600 Phaseolus vulgaris HOM05D006283 ORTHO05D007727 1.1e-07 61.2 77 42.9
arahy.Tifrunner.gnm1.ann1.9EYB94 Arachis hypogaea HOM05D006283 ORTHO05D007727 1.5e-07 60.8 87 40.2
C06p26110 Brassica napus HOM05D006283 ORTHO05D007727 1.5e-07 60.8 86 44.2
BolC6t37776H Brassica oleracea HOM05D006283 ORTHO05D007727 1.5e-07 60.8 86 44.2
BraA07t30108Z Brassica rapa HOM05D006283 ORTHO05D007727 1.5e-07 60.8 86 44.2
Eucgr.H00372 Eucalyptus grandis HOM05D006283 ORTHO05D007727 1.5e-07 60.8 74 47.3
Sabra19G0057300 Salix brachista HOM05D006283 ORTHO05D007727 1.5e-07 60.8 74 45.9
Sc13g0006800 Simmondsia chinensis HOM05D006283 ORTHO05D007727 1.5e-07 60.8 79 41.8
TWI15G0224 Tripterygium wilfordii HOM05D006283 ORTHO05D007727 1.5e-07 60.8 74 44.6
TWI15G1054 Tripterygium wilfordii HOM05D006283 ORTHO05D007727 1.5e-07 60.8 74 44.6
FvH4_4g10770 Fragaria vesca HOM05D006283 ORTHO05D007727 1.9e-07 60.5 91 41.8
FAN12G2405 Fragaria x ananassa HOM05D006283 ORTHO05D007727 1.9e-07 60.5 91 41.8
MD04G1040100 Malus domestica HOM05D006283 ORTHO05D007727 1.9e-07 60.5 31 87.1
AL5G41290 Arabidopsis lyrata HOM05D006283 ORTHO05D007727 2.5e-07 60.1 74 44.6
AT3G59390 Arabidopsis thaliana HOM05D006283 ORTHO05D007727 2.5e-07 60.1 74 44.6
Ca_20784_v3 Cicer arietinum L. HOM05D006283 ORTHO05D007727 2.5e-07 60.1 75 46.7
Hund12011 Selenicereus undatus HOM05D006283 ORTHO05D007727 2.5e-07 60.1 31 87.1
ATR0824G015 Amborella trichopoda HOM05D006283 ORTHO05D007727 3.3e-07 59.7 80 41.2
BcaB02g07471 Brassica carinata HOM05D006283 ORTHO05D007727 3.3e-07 59.7 75 44.0
AUR62015391 Chenopodium quinoa HOM05D006283 ORTHO05D007727 3.3e-07 59.7 79 40.5
Glyma.11G127900 Glycine max HOM05D006283 ORTHO05D007727 3.3e-07 59.7 75 45.3
THA.LOC104803704 Tarenaya hassleriana HOM05D006283 ORTHO05D007727 3.3e-07 59.7 74 44.6
CDE08G0087 Ceratophyllum demersum HOM05D006283 ORTHO05D007727 4.3e-07 59.3 77 44.2
RcHm_v2.0_Chr4g0406391 Rosa chinensis HOM05D006283 ORTHO05D007727 4.3e-07 59.3 74 44.6
SGA_v2.0_scaffold12G06158 Striga asiatica HOM05D006283 ORTHO05D007727 4.3e-07 59.3 31 83.9
DCAR_029916 Daucus carota HOM05D006283 ORTHO05D007727 5.7e-07 58.9 78 42.3
FAN07G2518 Fragaria x ananassa HOM05D006283 ORTHO05D007727 5.7e-07 58.9 31 83.9
Aa31LG10G13740 Aethionema arabicum HOM05D006283 ORTHO05D007727 7.4e-07 58.5 74 44.6
MSTRG.9766 Avicennia marina HOM05D006283 ORTHO05D007727 7.4e-07 58.5 74 43.2
TPR.G34200 Trifolium pratense HOM05D006283 ORTHO05D007727 7.4e-07 58.5 75 45.3
CANSAT78G1066 Cannabis sativa HOM05D006283 ORTHO05D007727 9.6e-07 58.2 75 42.7
Ciclev10021635m.g Citrus clementina HOM05D006283 ORTHO05D007727 9.6e-07 58.2 74 44.6
RcHm_v2.0_Chr4g0406821 Rosa chinensis HOM05D006283 ORTHO05D007727 9.6e-07 58.2 32 78.1
SalBow3G2028 Salvia bowleyana HOM05D006283 ORTHO05D007727 9.6e-07 58.2 71 43.7
MELO3C017715.2 Cucumis melo HOM05D006283 ORTHO05D007727 1.3e-06 57.8 74 44.6
CsaV3_4G003450 Cucumis sativus L. HOM05D006283 ORTHO05D007727 1.3e-06 57.8 74 44.6
PSO017G4585 Papaver somniferum HOM05D006283 ORTHO05D007727 1.3e-06 57.8 79 41.8
PSO675G6362 Papaver somniferum HOM05D006283 ORTHO05D007727 1.3e-06 57.8 79 41.8
Lalb_Chr01g0003171 Lupinus albus HOM05D006283 ORTHO05D007727 1.6e-06 57.4 79 41.8
Medtr4g067140 Medicago truncatula HOM05D006283 ORTHO05D007727 2.1e-06 57.0 89 40.4
Aqoxy2G04092 Aquilegia oxysepala HOM05D006283 ORTHO05D007727 2.8e-06 56.6 77 42.9
EL10Ac3g05930 Beta vulgaris HOM05D006283 ORTHO05D007727 2.8e-06 56.6 79 39.2
CSS0025348 Camellia sinensis var. sinensis HOM05D026757 ORTHO05D009802 2.8e-06 56.6 46 67.4
CSS0004827 Camellia sinensis var. sinensis HOM05D000035 ORTHO05D000009 3.7e-06 56.2 34 82.4
CSS0024975 Camellia sinensis var. sinensis HOM05D026757 ORTHO05D007247 3.7e-06 56.2 46 67.4
ClCG07G015660 Citrullus lanatus HOM05D006283 ORTHO05D007727 3.7e-06 56.2 31 77.4
HPP92_009172 Vanilla planifolia HOM05D006283 ORTHO05D007727 3.7e-06 56.2 31 74.2
Ah.07g201980 Amaranthus hybridus HOM05D006283 ORTHO05D007727 8.2e-06 55.1 31 74.2
Carub.0005s2613 Capsella rubella HOM05D006283 ORTHO05D007727 8.2e-06 55.1 74 40.5


User provided reference genes

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