Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0026666 Camellia sinensis var. sinensis HOM05D007613 ORTHO05D009344 1.1e-46 189.5 89 100.0
Actinidia24821 Actinidia chinensis HOM05D007613 ORTHO05D009344 1.2e-37 159.5 87 85.1
vmacro15014 Vaccinium macrocarpon HOM05D007613 ORTHO05D009344 1.3e-34 149.4 87 78.2
Nn3g21498 Nelumbo nucifera HOM05D007613 ORTHO05D009344 1.1e-33 146.4 87 77.0
CiPaw.07G109200 Carya illinoinensis HOM05D007613 ORTHO05D009344 5.3e-33 144.1 87 74.7
Eucgr.H01109 Eucalyptus grandis HOM05D007613 ORTHO05D009344 3.5e-32 141.4 78 78.2
TAR636G2501 Trochodendron aralioides HOM05D007613 ORTHO05D009344 3.5e-32 141.4 87 73.6
QL12p028448 Quercus lobata HOM05D007613 ORTHO05D009344 5.9e-32 140.6 87 73.6
arahy.Tifrunner.gnm1.ann1.BW40YJ Arachis hypogaea HOM05D007613 ORTHO05D009344 1.3e-31 139.4 80 75.0
Potri.014G128900 Populus trichocarpa HOM05D007613 ORTHO05D009344 1.3e-31 139.4 80 75.0
ECA248G1192 Erigeron canadensis HOM05D007613 ORTHO05D009344 2.2e-31 138.7 79 75.9
arahy.Tifrunner.gnm1.ann1.7MAL8N Arachis hypogaea HOM05D007613 ORTHO05D009344 2.9e-31 138.3 80 75.0
Manes.01G219200 Manihot esculenta HOM05D007613 ORTHO05D009344 2.9e-31 138.3 80 77.5
Ciclev10022836m.g Citrus clementina HOM05D007613 ORTHO05D009344 3.8e-31 137.9 78 80.8
PGR119G2478 Punica granatum HOM05D007613 ORTHO05D009344 3.8e-31 137.9 78 78.2
Rhsim01G0285300 Rhododendron simsii HOM05D007613 ORTHO05D009344 5.0e-31 137.5 99 64.6
Lsat_1_v5_gn_5_191040 Lactuca sativa HOM05D007613 ORTHO05D009344 1.1e-30 136.3 79 72.2
Peaxi162Scf00140g01222 Petunia axillaris HOM05D007613 ORTHO05D009344 1.9e-30 135.6 81 72.8
Haze_04939 Corylus avellana HOM05D007613 ORTHO05D009344 3.2e-30 134.8 102 63.7
CsaV3_7G029280 Cucumis sativus L. HOM05D007613 ORTHO05D009344 4.2e-30 134.4 87 65.5
HanXRQChr13g0413041 Helianthus annuus HOM05D007613 ORTHO05D009344 4.2e-30 134.4 79 70.9
Thecc.01G300700 Theobroma cacao HOM05D007613 ORTHO05D009344 5.5e-30 134.0 87 66.7
Solyc06g084550.3 Solanum lycopersicum HOM05D007613 ORTHO05D009344 7.2e-30 133.7 79 70.9
MELO3C016000.2 Cucumis melo HOM05D007613 ORTHO05D009344 9.4e-30 133.3 87 64.4
Cc01_g20860 Coffea canephora HOM05D007613 ORTHO05D009344 1.2e-29 132.9 87 72.4
GSVIVG01028017001 Vitis vinifera HOM05D007613 ORTHO05D009344 1.2e-29 132.9 87 71.3
Sed0015913 Sechium edule HOM05D007613 ORTHO05D009344 1.6e-29 132.5 87 64.4
Sopen06g035930 Solanum pennellii HOM05D007613 ORTHO05D009344 1.6e-29 132.5 79 70.9
Nitab4.5_0002820g0060 Nicotiana tabacum HOM05D007613 ORTHO05D009344 2.1e-29 132.1 87 70.1
Cpa.g.sc9.260 Carica papaya HOM05D000286 ORTHO05D000170 3.6e-29 131.3 80 68.8
Nitab4.5_0019054g0010 Nicotiana tabacum HOM05D007613 ORTHO05D009344 3.6e-29 131.3 79 70.9
Duzib133G0913 Durio zibethinus HOM05D007613 ORTHO05D009344 8.0e-29 130.2 77 72.7
MSTRG.18147 Avicennia marina HOM05D007613 ORTHO05D009344 2.3e-28 128.6 78 69.2
Glyma.10G018300 Glycine max HOM05D007613 ORTHO05D009344 1.5e-27 125.9 80 67.5
Lj5g0017580 Lotus japonicus HOM05D007613 ORTHO05D009344 2.0e-27 125.6 78 69.2
Oeu048336.2 Olea europaea HOM05D007613 ORTHO05D009344 2.0e-27 125.6 79 68.4
Gorai.008G145100 Gossypium raimondii HOM05D007613 ORTHO05D009344 4.4e-27 124.4 77 72.7
Phvul.007G146700 Phaseolus vulgaris HOM05D007613 ORTHO05D009344 4.4e-27 124.4 80 66.2
TPR.G33996 Trifolium pratense HOM05D007613 ORTHO05D009344 4.4e-27 124.4 78 71.8
AT3G62880 Arabidopsis thaliana HOM05D007613 ORTHO05D009344 5.7e-27 124.0 78 66.7
CDE08G0198 Ceratophyllum demersum HOM05D007613 ORTHO05D009344 5.7e-27 124.0 79 68.4
VMungo0720G1265 Vigna mungo HOM05D007613 ORTHO05D009344 5.7e-27 124.0 80 67.5
Gohir.D12G134100 Gossypium hirsutum HOM05D007613 ORTHO05D009344 7.5e-27 123.6 77 71.4
Psat6g165400 Pisum sativum HOM05D007613 ORTHO05D009344 7.5e-27 123.6 78 70.5
COL.COLO4_23344 Corchorus olitorius HOM05D007613 ORTHO05D009344 9.7e-27 123.2 80 65.0
Ah.08g213430 Amaranthus hybridus HOM05D000286 ORTHO05D000170 1.3e-26 122.9 79 67.1
Medtr1g088460 Medicago truncatula HOM05D007613 ORTHO05D009344 1.3e-26 122.9 78 71.8
TWI59G0030 Tripterygium wilfordii HOM05D007613 ORTHO05D009344 1.7e-26 122.5 78 64.1
AL5G45650 Arabidopsis lyrata HOM05D007613 ORTHO05D009344 2.2e-26 122.1 78 64.1
CAN.G1209.25 Capsicum annuum HOM05D007613 ORTHO05D009344 2.2e-26 122.1 87 63.2
DCAR_018332 Daucus carota HOM05D007613 ORTHO05D009344 6.3e-26 120.6 87 60.9
MD03G1288400 Malus domestica HOM05D007613 ORTHO05D009344 6.3e-26 120.6 87 67.8
Migut.D00222 Erythranthe guttata HOM05D007613 ORTHO05D009344 1.4e-25 119.4 78 62.8
Thhalv10006304m.g Eutrema salsugineum HOM05D007613 ORTHO05D009344 2.4e-25 118.6 78 61.5
BraA04t15767Z Brassica rapa HOM05D007613 ORTHO05D009344 3.1e-25 118.2 87 58.6
Sp5g00640 Schrenkiella parvula HOM05D007613 ORTHO05D009344 3.1e-25 118.2 78 61.5
C04p30380 Brassica napus HOM05D007613 ORTHO05D009344 7.0e-25 117.1 87 58.6
BolC4t24569H Brassica oleracea HOM05D007613 ORTHO05D009344 7.0e-25 117.1 87 58.6
CARHR173140 Cardamine hirsuta HOM05D007613 ORTHO05D009344 7.0e-25 117.1 78 61.5
Actinidia21047 Actinidia chinensis HOM05D007613 ORTHO05D009344 1.2e-24 116.3 64 84.4
EL10Ac7g17473 Beta vulgaris HOM05D007613 ORTHO05D009344 1.2e-24 116.3 76 65.8
BcaB02g08092 Brassica carinata HOM05D007613 ORTHO05D009344 1.6e-24 115.9 87 57.5
Lalb_Chr02g0146351 Lupinus albus HOM05D007613 ORTHO05D009344 2.0e-24 115.5 78 60.3
Atru.chr5.1146 Acer truncatum HOM05D007613 ORTHO05D009344 2.7e-24 115.2 77 63.6
HanXRQChr13g0413071 Helianthus annuus HOM05D007613 ORTHO05D009344 2.7e-24 115.2 70 68.6
Lalb_Chr06g0166471 Lupinus albus HOM05D007613 ORTHO05D009344 2.7e-24 115.2 78 60.3
PSO170G2016 Papaver somniferum HOM05D007613 ORTHO05D009344 2.7e-24 115.2 78 61.5
THA.LOC104798831 Tarenaya hassleriana HOM05D007613 ORTHO05D009344 5.9e-24 114.0 78 60.3
Aa31LG10G16510 Aethionema arabicum HOM05D007613 ORTHO05D009344 7.7e-24 113.6 87 55.2
Prupe.8G261600 Prunus persica HOM05D007613 ORTHO05D009344 1.0e-23 113.2 87 63.2
RcHm_v2.0_Chr6g0294031 Rosa chinensis HOM05D007613 ORTHO05D009344 1.0e-23 113.2 77 64.9
Hma1.2p1_0491F.1_g164570 Hydrangea macrophylla HOM05D007613 ORTHO05D009344 3.8e-23 111.3 88 60.2
Aqoxy2G02939 Aquilegia oxysepala HOM05D007613 ORTHO05D009344 5.0e-23 110.9 79 60.8
Ca_10334_v3 Cicer arietinum L. HOM05D007613 ORTHO05D009344 1.5e-22 109.4 78 66.7
FAN20G1450 Fragaria x ananassa HOM05D007613 ORTHO05D009344 6.1e-21 104.0 94 52.1
FAN27G2766 Fragaria x ananassa HOM05D007613 ORTHO05D009344 2.3e-20 102.1 93 52.7
FvH4_2g25740 Fragaria vesca HOM05D007613 ORTHO05D009344 5.2e-20 100.9 93 51.6
Migut.B01150 Erythranthe guttata HOM05D007613 ORTHO05D009344 3.7e-18 94.7 65 56.9
A04p00480 Brassica napus HOM05D007613 ORTHO05D009344 6.3e-18 94.0 65 58.5
ClCG09G005860 Citrullus lanatus HOM05D007613 ORTHO05D009344 1.6e-16 89.4 66 62.1
ATR0706G141 Amborella trichopoda HOM05D007613 ORTHO05D009344 1.7e-15 85.9 87 42.5
SalBow3G3757 Salvia bowleyana HOM05D007613 ORTHO05D009344 3.8e-15 84.7 55 63.6
Sabra14G0095700 Salix brachista HOM05D007613 ORTHO05D009344 5.0e-15 84.3 46 82.6
SMO347G0100 Selaginella moellendorffii HOM05D007613 ORTHO05D009344 9.5e-14 80.1 77 46.8
SHI15147 Sapria himalayana HOM05D007613 ORTHO05D009344 2.8e-13 78.6 56 60.7
PGSC0003DMG400024046 Solanum tuberosum HOM05D007613 ORTHO05D009344 1.0e-12 76.6 102 40.2
Pp3c19_22480 Physcomitrium patens HOM05D007613 ORTHO05D009344 2.8e-10 68.6 77 44.2
unitig_0.g668 Utricularia gibba HOM05D007613 ORTHO05D009344 4.9e-10 67.8 48 66.7
SGA_v2.0_scaffold1G00364 Striga asiatica HOM05D001636 ORTHO05D003817 1.1e-09 66.6 45 60.0
AUR62033103 Chenopodium quinoa HOM05D007613 ORTHO05D009344 1.7e-07 59.3 34 70.6
BcaC02g10319 Brassica carinata HOM05D007613 ORTHO05D009344 2.9e-07 58.5 34 64.7
Gohir.A12G130300 Gossypium hirsutum HOM05D007613 ORTHO05D009344 1.5e-06 56.2 34 70.6


User provided reference genes

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