Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0026660 Camellia sinensis var. sinensis HOM05D007677 ORTHO05D009728 5.4e-86 320.9 150 100.0
CSS0000052 Camellia sinensis var. sinensis HOM05D007677 ORTHO05D009728 6.6e-68 260.8 150 86.0
Thecc.04G221700 Theobroma cacao HOM05D007677 ORTHO05D009728 1.5e-67 259.6 150 80.0
COL.COLO4_21648 Corchorus olitorius HOM05D007677 ORTHO05D009728 5.6e-67 257.7 152 77.6
Gohir.A02G031000 Gossypium hirsutum HOM05D007677 ORTHO05D009728 6.2e-66 254.2 150 76.7
MD13G1183200 Malus domestica HOM05D007677 ORTHO05D009728 6.2e-66 254.2 152 78.3
Duzib212G0325 Durio zibethinus HOM05D001530 ORTHO05D003676 2.3e-65 252.3 150 77.3
Nn1g02165 Nelumbo nucifera HOM05D007677 ORTHO05D009728 6.8e-65 250.8 150 76.7
Gohir.D02G037900 Gossypium hirsutum HOM05D007677 ORTHO05D009728 2.6e-64 248.8 150 75.3
Gorai.005G041800 Gossypium raimondii HOM05D007677 ORTHO05D009728 2.6e-64 248.8 150 75.3
Cc03_g03130 Coffea canephora HOM05D007677 ORTHO05D009728 1.7e-63 246.1 150 76.0
Ciclev10006064m.g Citrus clementina HOM05D007677 ORTHO05D009728 4.9e-63 244.6 147 75.5
Manes.03G184600 Manihot esculenta HOM05D007677 ORTHO05D009728 1.1e-62 243.4 150 75.3
FvH4_4g14500 Fragaria vesca HOM05D007677 ORTHO05D009728 1.4e-62 243.0 151 76.2
FAN12G4178 Fragaria x ananassa HOM05D007677 ORTHO05D009728 1.4e-62 243.0 151 76.2
CSS0045125 Camellia sinensis var. sinensis HOM05D007677 ORTHO05D009728 4.1e-62 241.5 159 74.8
CiPaw.01G160100 Carya illinoinensis HOM05D007677 ORTHO05D009728 4.1e-62 241.5 145 76.6
DCAR_030598 Daucus carota HOM05D007677 ORTHO05D009728 7.1e-62 240.7 150 75.3
Oeu037682.1 Olea europaea HOM05D007677 ORTHO05D009728 7.1e-62 240.7 151 76.2
Eucgr.H03598 Eucalyptus grandis HOM05D007677 ORTHO05D009728 9.2e-62 240.4 151 75.5
RcHm_v2.0_Chr4g0418331 Rosa chinensis HOM05D007677 ORTHO05D009728 9.2e-62 240.4 148 77.0
FAN07G0089 Fragaria x ananassa HOM05D007677 ORTHO05D009728 2.1e-61 239.2 151 74.8
MD16G1184100 Malus domestica HOM05D007677 ORTHO05D009728 2.1e-61 239.2 152 73.7
Peaxi162Scf00196g00106 Petunia axillaris HOM05D007677 ORTHO05D009728 7.8e-61 237.3 147 76.2
Prupe.1G151500 Prunus persica HOM05D007677 ORTHO05D009728 7.8e-61 237.3 152 75.7
TWI09G0567 Tripterygium wilfordii HOM05D007677 ORTHO05D009728 7.8e-61 237.3 146 74.7
Aqoxy2G03269 Aquilegia oxysepala HOM05D007677 ORTHO05D009728 1.0e-60 236.9 139 77.7
CiPaw.02G092500 Carya illinoinensis HOM05D007677 ORTHO05D009728 1.7e-60 236.1 145 77.9
QL06p004212 Quercus lobata HOM05D007677 ORTHO05D009728 1.7e-60 236.1 149 73.8
CANSAT78G2143 Cannabis sativa HOM05D007677 ORTHO05D009728 3.0e-60 235.3 152 75.0
ClCG05G005440 Citrullus lanatus HOM05D007677 ORTHO05D009728 1.1e-59 233.4 149 71.8
MELO3C006567.2 Cucumis melo HOM05D007677 ORTHO05D009728 1.1e-59 233.4 150 71.3
Lj6P565T22 Lonicera japonica HOM05D007677 ORTHO05D009728 1.1e-59 233.4 145 75.9
Phvul.003G092600 Phaseolus vulgaris HOM05D007677 ORTHO05D009728 2.5e-59 232.3 150 74.7
Sabra10G0011000 Salix brachista HOM05D001530 ORTHO05D004168 4.3e-59 231.5 145 73.8
CsaV3_3G013730 Cucumis sativus L. HOM05D007677 ORTHO05D009728 7.3e-59 230.7 150 71.3
SGA_v2.0_scaffold237G43825 Striga asiatica HOM05D007677 ORTHO05D009728 7.3e-59 230.7 156 69.2
Glyma.13G208700 Glycine max HOM05D007677 ORTHO05D009728 9.5e-59 230.3 147 74.1
Phvul.006G153800 Phaseolus vulgaris HOM05D007677 ORTHO05D009728 1.2e-58 229.9 150 73.3
Solyc01g080100.3 Solanum lycopersicum HOM05D007677 ORTHO05D009728 2.1e-58 229.2 145 75.2
Glyma.17G017000 Glycine max HOM05D007677 ORTHO05D009728 2.8e-58 228.8 150 74.0
VMungo1215G2604 Vigna mungo HOM05D007677 ORTHO05D009728 2.8e-58 228.8 150 73.3
PGSC0003DMG400033121 Solanum tuberosum HOM05D007677 ORTHO05D009728 4.7e-58 228.0 145 74.5
Sopen01g031880 Solanum pennellii HOM05D007677 ORTHO05D009728 6.2e-58 227.6 145 74.5
TAR633G1088 Trochodendron aralioides HOM05D007677 ORTHO05D009728 6.2e-58 227.6 156 69.9
vmacro08279 Vaccinium macrocarpon HOM05D007677 ORTHO05D009728 6.2e-58 227.6 157 70.7
Cfa015583 Carpinus fangiana HOM05D007677 ORTHO05D009728 8.1e-58 227.3 150 72.7
PGR004G0596 Punica granatum HOM05D007677 ORTHO05D009728 1.1e-57 226.9 151 70.9
Glyma.15G104100 Glycine max HOM05D007677 ORTHO05D009728 1.4e-57 226.5 147 73.5
Sed0011127 Sechium edule HOM05D007677 ORTHO05D009728 2.4e-57 225.7 150 70.0
Haze_00962 Corylus avellana HOM05D007677 ORTHO05D009728 4.0e-57 224.9 150 72.0
Lj6g0003442 Lotus japonicus HOM05D007677 ORTHO05D009728 5.2e-57 224.6 152 71.7
PSO407G0046 Papaver somniferum HOM05D007677 ORTHO05D009728 6.8e-57 224.2 141 75.2
PSO170G6325 Papaver somniferum HOM05D007677 ORTHO05D009728 1.5e-56 223.0 141 74.5
Ca_00644_v3 Cicer arietinum L. HOM05D007677 ORTHO05D009728 3.4e-56 221.9 150 71.3
Lj4g0019321 Lotus japonicus HOM05D007677 ORTHO05D009728 4.4e-56 221.5 153 71.2
arahy.Tifrunner.gnm1.ann1.PDVV0K Arachis hypogaea HOM05D007677 ORTHO05D009728 5.8e-56 221.1 145 73.8
arahy.Tifrunner.gnm1.ann1.UI8DPT Arachis hypogaea HOM05D007677 ORTHO05D009728 5.8e-56 221.1 145 73.8
Medtr4g117270 Medicago truncatula HOM05D007677 ORTHO05D009728 7.6e-56 220.7 150 73.3
Medtr2g022190 Medicago truncatula HOM05D007677 ORTHO05D009728 2.2e-55 219.2 150 71.3
Lalb_Chr18g0056081 Lupinus albus HOM05D007677 ORTHO05D009728 2.9e-55 218.8 144 72.2
Ca_21594_v3 Cicer arietinum L. HOM05D007677 ORTHO05D009728 1.9e-54 216.1 149 69.1
TPR.G30685 Trifolium pratense HOM05D007677 ORTHO05D009728 2.4e-54 215.7 150 69.3
VMungo0540G0472 Vigna mungo HOM05D007677 ORTHO05D009728 4.1e-54 214.9 150 68.7
TPR.G20115 Trifolium pratense HOM05D007677 ORTHO05D009728 5.4e-54 214.5 150 71.3
Migut.G00291 Erythranthe guttata HOM05D007677 ORTHO05D009728 4.6e-53 211.5 145 71.0
Psat4g031560 Pisum sativum HOM05D007677 ORTHO05D009728 7.8e-53 210.7 149 69.1
Glyma.07G257100 Glycine max HOM05D007677 ORTHO05D009728 6.6e-52 207.6 150 68.7
Nitab4.5_0001247g0090 Nicotiana tabacum HOM05D007677 ORTHO05D009728 4.3e-51 204.9 147 68.7
AUR62030087 Chenopodium quinoa HOM05D007677 ORTHO05D007693 1.2e-50 203.4 141 70.9
Psat1g183560 Pisum sativum HOM05D007677 ORTHO05D009728 2.8e-50 202.2 150 66.0
Dinv38394 Davidia involucrata HOM05D007677 ORTHO05D009728 6.2e-50 201.1 135 72.6
Sc13g0003990 Simmondsia chinensis HOM05D007677 ORTHO05D009728 2.4e-49 199.1 149 64.4
THA.LOC104820106 Tarenaya hassleriana HOM05D001407 ORTHO05D001314 2.4e-46 189.1 148 61.5
BcaC05g30051 Brassica carinata HOM05D007677 ORTHO05D009728 6.9e-41 171.0 145 54.5
Sp3g05100 Schrenkiella parvula HOM05D007677 ORTHO05D009728 6.9e-41 171.0 145 55.2
A05p41840 Brassica napus HOM05D007677 ORTHO05D009728 9.0e-41 170.6 145 54.5
BraA05t22903Z Brassica rapa HOM05D007677 ORTHO05D009728 9.0e-41 170.6 145 54.5
BcaNung06667 Brassica carinata HOM05D007677 ORTHO05D009728 1.2e-40 170.2 150 54.7
C05p61090 Brassica napus HOM05D007677 ORTHO05D009728 1.2e-40 170.2 145 55.2
BolC5t34766H Brassica oleracea HOM05D007677 ORTHO05D009728 1.2e-40 170.2 145 55.2
AL3G17000 Arabidopsis lyrata HOM05D007677 ORTHO05D009728 7.6e-40 167.5 145 55.2
Thhalv10021653m.g Eutrema salsugineum HOM05D007677 ORTHO05D009728 4.9e-39 164.9 145 54.5
AT3G06145 Arabidopsis thaliana HOM05D007677 ORTHO05D009728 6.4e-39 164.5 142 54.2
Carub.0003s0558 Capsella rubella HOM05D007677 ORTHO05D009728 8.4e-39 164.1 145 53.8
Aa31LG5G16660 Aethionema arabicum HOM05D007677 ORTHO05D009728 1.9e-38 162.9 151 54.3
CARHR080660 Cardamine hirsuta HOM05D007677 ORTHO05D009728 4.2e-38 161.8 145 54.5
TAR362G0152 Trochodendron aralioides HOM05D007677 ORTHO05D009728 4.2e-38 161.8 109 67.9
ATR0626G325 Amborella trichopoda HOM05D007677 ORTHO05D009728 3.9e-36 155.2 139 55.4
SEGI_19260 Sequoiadendron giganteum HOM05D007677 ORTHO05D009728 1.9e-30 136.3 128 52.3
SHI00378 Sapria himalayana HOM05D007677 ORTHO05D009728 9.3e-30 134.0 145 47.6
Lsat_1_v5_gn_7_41320 Lactuca sativa HOM05D007677 ORTHO05D009728 2.3e-28 129.4 75 78.7
EL10Ac3g06358 Beta vulgaris HOM05D007677 ORTHO05D009728 7.1e-22 107.8 70 71.4
Atru.chr4.2568 Acer truncatum HOM05D007677 ORTHO05D009728 9.3e-22 107.5 78 67.9
MBI17_g34455_MAGBIO Magnolia biondii HOM05D002055 ORTHO05D002120 8.7e-20 100.9 61 70.5
Potri.010G030701 Populus trichocarpa HOM05D007677 ORTHO05D009728 3.3e-19 99.0 79 60.8
SEGI_22306 Sequoiadendron giganteum HOM05D007677 ORTHO05D009728 6.9e-17 91.3 114 38.6
SEGI_22697 Sequoiadendron giganteum HOM05D007677 ORTHO05D009728 3.4e-16 89.0 114 39.5


User provided reference genes

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