Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0026651 Camellia sinensis var. sinensis HOM05D005904 ORTHO05D007074 3.4e-32 141.0 67 100.0
CSS0014810 Camellia sinensis var. sinensis HOM05D005904 ORTHO05D007074 2.1e-21 105.1 54 92.6
Actinidia21754 Actinidia chinensis HOM05D005904 ORTHO05D007074 3.9e-20 100.9 52 90.4
Dinv30384 Davidia involucrata HOM05D005904 ORTHO05D007074 1.3e-18 95.9 54 83.3
Manes.04G139100 Manihot esculenta HOM05D005904 ORTHO05D007074 1.3e-18 95.9 54 81.5
ECA234G0674 Erigeron canadensis HOM05D005904 ORTHO05D007074 2.8e-18 94.7 54 83.3
HanXRQChr10g0310911 Helianthus annuus HOM05D005904 ORTHO05D007074 6.2e-18 93.6 54 81.5
Oeu039966.1 Olea europaea HOM05D005904 ORTHO05D007074 6.2e-18 93.6 54 81.5
CAN.G1389.13 Capsicum annuum HOM05D005904 ORTHO05D007074 1.1e-17 92.8 48 89.6
CiPaw.02G140600 Carya illinoinensis HOM05D005904 ORTHO05D007074 1.1e-17 92.8 54 81.5
SalBow6G4349 Salvia bowleyana HOM05D005904 ORTHO05D007074 1.1e-17 92.8 54 81.5
DCAR_022713 Daucus carota HOM05D005904 ORTHO05D007074 1.4e-17 92.4 52 82.7
CANSAT56G1468 Cannabis sativa HOM05D005904 ORTHO05D007074 1.8e-17 92.0 54 79.6
Haze_15945 Corylus avellana HOM05D005904 ORTHO05D007074 1.8e-17 92.0 50 86.0
Cpa.g.sc25.58 Carica papaya HOM05D005904 ORTHO05D007074 2.4e-17 91.7 54 79.6
Solyc03g121530.3 Solanum lycopersicum HOM05D005904 ORTHO05D007074 2.4e-17 91.7 48 87.5
CsaV3_3G043900 Cucumis sativus L. HOM05D005904 ORTHO05D007074 3.1e-17 91.3 54 79.6
Nitab4.5_0007429g0020 Nicotiana tabacum HOM05D005904 ORTHO05D007074 3.1e-17 91.3 48 85.4
Lj9A518G85 Lonicera japonica HOM05D005904 ORTHO05D007074 4.0e-17 90.9 50 82.0
Sed0023540 Sechium edule HOM05D005904 ORTHO05D007074 4.0e-17 90.9 54 79.6
FvH4_4g12940 Fragaria vesca HOM05D005904 ORTHO05D007074 5.3e-17 90.5 54 77.8
FAN07G2466 Fragaria x ananassa HOM05D005904 ORTHO05D007074 5.3e-17 90.5 54 77.8
SGA_v2.0_scaffold45G16976 Striga asiatica HOM05D005904 ORTHO05D007074 5.3e-17 90.5 54 79.6
arahy.Tifrunner.gnm1.ann1.21ET8L Arachis hypogaea HOM05D005904 ORTHO05D007074 6.9e-17 90.1 54 77.8
arahy.Tifrunner.gnm1.ann1.LV1MMJ Arachis hypogaea HOM05D005904 ORTHO05D007074 6.9e-17 90.1 54 77.8
QL05p012810 Quercus lobata HOM05D005904 ORTHO05D007074 6.9e-17 90.1 54 77.8
unitig_0.g2872 Utricularia gibba HOM05D005904 ORTHO05D007074 6.9e-17 90.1 54 77.8
MELO3C013052.2 Cucumis melo HOM05D005904 ORTHO05D007074 9.0e-17 89.7 54 79.6
ClCG07G013710 Citrullus lanatus HOM05D005904 ORTHO05D007074 1.2e-16 89.4 54 77.8
Peaxi162Scf00038g01518 Petunia axillaris HOM05D005904 ORTHO05D007074 1.2e-16 89.4 48 85.4
GSVIVG01016848001 Vitis vinifera HOM05D005904 ORTHO05D007074 1.2e-16 89.4 52 80.8
MSTRG.22589 Avicennia marina HOM05D005904 ORTHO05D007074 1.5e-16 89.0 54 75.9
Glyma.15G023700 Glycine max HOM05D005904 ORTHO05D007074 1.5e-16 89.0 54 77.8
Lj5A45T77 Lonicera japonica HOM05D005904 ORTHO05D007074 1.5e-16 89.0 54 79.6
Lj3g0018823 Lotus japonicus HOM05D005904 ORTHO05D007074 1.5e-16 89.0 54 77.8
Potri.001G200300 Populus trichocarpa HOM05D005904 ORTHO05D007074 1.5e-16 89.0 48 85.4
Rhsim08G0232900 Rhododendron simsii HOM05D005904 ORTHO05D007074 1.5e-16 89.0 54 79.6
Sabra01G0156900 Salix brachista HOM05D005904 ORTHO05D007074 1.5e-16 89.0 48 85.4
MD09G1194100 Malus domestica HOM05D005904 ORTHO05D007074 2.0e-16 88.6 54 75.9
RcHm_v2.0_Chr6g0267021 Rosa chinensis HOM05D005904 ORTHO05D007074 2.0e-16 88.6 54 75.9
Cc07_g04610 Coffea canephora HOM05D005904 ORTHO05D007074 2.6e-16 88.2 54 75.9
FAN12G1666 Fragaria x ananassa HOM05D005904 ORTHO05D007074 2.6e-16 88.2 51 80.4
Lsat_1_v5_gn_5_134821 Lactuca sativa HOM05D005904 ORTHO05D007074 2.6e-16 88.2 54 75.9
Prupe.3G050600 Prunus persica HOM05D005904 ORTHO05D007074 2.6e-16 88.2 55 74.5
Nitab4.5_0001295g0010 Nicotiana tabacum HOM05D005904 ORTHO05D007074 3.4e-16 87.8 48 85.4
Psat5g293640 Pisum sativum HOM05D005904 ORTHO05D007074 5.8e-16 87.0 54 75.9
TAR383G0617 Trochodendron aralioides HOM05D005904 ORTHO05D007074 5.8e-16 87.0 54 72.2
Ciclev10026243m.g Citrus clementina HOM05D005904 ORTHO05D007074 7.6e-16 86.7 52 76.9
Hund18723 Selenicereus undatus HOM05D005904 ORTHO05D007074 7.6e-16 86.7 54 77.8
Sc12g0010220 Simmondsia chinensis HOM05D005904 ORTHO05D007074 7.6e-16 86.7 54 77.8
THA.LOC104810344 Tarenaya hassleriana HOM05D005904 ORTHO05D007074 7.6e-16 86.7 54 75.9
Medtr2g100220 Medicago truncatula HOM05D005904 ORTHO05D007074 9.9e-16 86.3 54 75.9
Nn6g35465 Nelumbo nucifera HOM05D005904 ORTHO05D007074 9.9e-16 86.3 54 74.1
TAR626G1971 Trochodendron aralioides HOM05D005904 ORTHO05D007074 9.9e-16 86.3 50 78.0
PSO210G1067 Papaver somniferum HOM05D005904 ORTHO05D007074 1.3e-15 85.9 54 74.1
PSO210G2600 Papaver somniferum HOM05D005904 ORTHO05D007074 1.3e-15 85.9 54 74.1
TWI31G1228 Tripterygium wilfordii HOM05D005904 ORTHO05D007074 1.3e-15 85.9 54 74.1
CDE06G0040 Ceratophyllum demersum HOM05D005904 ORTHO05D007074 1.7e-15 85.5 54 72.2
Phvul.005G160100 Phaseolus vulgaris HOM05D005904 ORTHO05D007074 1.7e-15 85.5 54 75.9
Aqoxy7G04049 Aquilegia oxysepala HOM05D005904 ORTHO05D007074 2.9e-15 84.7 54 74.1
EL10Ac7g15769 Beta vulgaris HOM05D005904 ORTHO05D007074 2.9e-15 84.7 54 77.8
Aa31LG8G920 Aethionema arabicum HOM05D005904 ORTHO05D007074 3.8e-15 84.3 54 75.9
Duzib235G0974 Durio zibethinus HOM05D005904 ORTHO05D007074 3.8e-15 84.3 54 72.2
VMungo1080G0888 Vigna mungo HOM05D005904 ORTHO05D007074 3.8e-15 84.3 54 74.1
PGR044G1952 Punica granatum HOM05D005904 ORTHO05D007074 4.9e-15 84.0 55 70.9
Actinidia32143 Actinidia chinensis HOM05D005904 ORTHO05D007074 6.4e-15 83.6 52 76.9
Migut.O00807 Erythranthe guttata HOM05D005904 ORTHO05D007074 8.4e-15 83.2 54 74.1
Gohir.D10G061500 Gossypium hirsutum HOM05D005904 ORTHO05D007074 8.4e-15 83.2 54 72.2
Gorai.011G065700 Gossypium raimondii HOM05D005904 ORTHO05D007074 1.1e-14 82.8 54 70.4
AL1G63140 Arabidopsis lyrata HOM05D005904 ORTHO05D007074 1.4e-14 82.4 54 70.4
Carub.0001s4364 Capsella rubella HOM05D005904 ORTHO05D007074 1.4e-14 82.4 54 70.4
Sp1g40800 Schrenkiella parvula HOM05D005904 ORTHO05D007074 1.4e-14 82.4 54 72.2
AT1G55140 Arabidopsis thaliana HOM05D005904 ORTHO05D007074 1.9e-14 82.0 54 70.4
A05p35680 Brassica napus HOM05D005904 ORTHO05D007074 1.9e-14 82.0 54 70.4
BraA05t22375Z Brassica rapa HOM05D005904 ORTHO05D007074 1.9e-14 82.0 54 70.4
BcaB04g16991 Brassica carinata HOM05D005904 ORTHO05D007074 2.4e-14 81.6 54 70.4
BcaB06g25441 Brassica carinata HOM05D005904 ORTHO05D007074 2.4e-14 81.6 54 70.4
BcaNung06385 Brassica carinata HOM05D005904 ORTHO05D007074 2.4e-14 81.6 54 70.4
C05p54090 Brassica napus HOM05D005904 ORTHO05D007074 2.4e-14 81.6 54 70.4
BolC5t34074H Brassica oleracea HOM05D005904 ORTHO05D007074 2.4e-14 81.6 54 70.4
Thhalv10021279m.g Eutrema salsugineum HOM05D005904 ORTHO05D007074 2.4e-14 81.6 54 70.4
Sp3g11940 Schrenkiella parvula HOM05D005904 ORTHO05D007074 2.4e-14 81.6 54 70.4
Eucgr.F03129 Eucalyptus grandis HOM05D005904 ORTHO05D007074 3.2e-14 81.3 54 70.4
Thhalv10011744m.g Eutrema salsugineum HOM05D005904 ORTHO05D007074 3.2e-14 81.3 54 70.4
Gohir.A10G060500 Gossypium hirsutum HOM05D005904 ORTHO05D007074 3.2e-14 81.3 54 68.5
Thecc.06G110900 Theobroma cacao HOM05D005904 ORTHO05D007074 3.2e-14 81.3 54 68.5
AL3G25790 Arabidopsis lyrata HOM05D005904 ORTHO05D007074 4.2e-14 80.9 52 73.1
AT3G13740 Arabidopsis thaliana HOM05D005904 ORTHO05D007074 4.2e-14 80.9 54 70.4
Lalb_Chr24g0396341 Lupinus albus HOM05D005904 ORTHO05D007074 4.2e-14 80.9 54 72.2
COL.COLO4_30653 Corchorus olitorius HOM05D005904 ORTHO05D007074 5.5e-14 80.5 54 66.7
HPP92_003969 Vanilla planifolia HOM05D005904 ORTHO05D007074 5.5e-14 80.5 54 70.4
A08p00940 Brassica napus HOM05D005904 ORTHO05D007074 7.1e-14 80.1 50 74.0
C03p92270 Brassica napus HOM05D005904 ORTHO05D007074 7.1e-14 80.1 50 74.0
BraA08t32149Z Brassica rapa HOM05D005904 ORTHO05D007074 7.1e-14 80.1 50 74.0
Aa31LG10G930 Aethionema arabicum HOM05D005904 ORTHO05D007074 9.3e-14 79.7 54 68.5
CARHR044740 Cardamine hirsuta HOM05D005904 ORTHO05D007074 9.3e-14 79.7 54 68.5
AL180U10010 Arabidopsis lyrata HOM05D005904 ORTHO05D007074 1.2e-13 79.3 53 67.9
AUR62009818 Chenopodium quinoa HOM05D005904 ORTHO05D007074 1.6e-13 79.0 54 70.4
AUR62038130 Chenopodium quinoa HOM05D005904 ORTHO05D007074 1.6e-13 79.0 54 70.4
Carub.0003s1326 Capsella rubella HOM05D005904 ORTHO05D007074 2.1e-13 78.6 54 68.5
BcaC01g01466 Brassica carinata HOM05D005904 ORTHO05D007074 2.7e-13 78.2 50 72.0
BolC3t21541H Brassica oleracea HOM05D005904 ORTHO05D007074 2.7e-13 78.2 50 72.0
Os05g0318300 Oryza sativa ssp. japonica HOM05D005904 ORTHO05D007074 4.6e-13 77.4 54 66.7
Os11g0237700 Oryza sativa ssp. japonica HOM05D005904 ORTHO05D007074 4.6e-13 77.4 54 66.7
Zm00001eb120860 Zea mays HOM05D005904 ORTHO05D007074 4.6e-13 77.4 54 66.7
Ah.08g216180 Amaranthus hybridus HOM05D005904 ORTHO05D007074 7.9e-13 76.6 54 68.5
DCAR_016164 Daucus carota HOM05D001529 ORTHO05D003309 1.8e-12 75.5 82 51.2
vmacro18789 Vaccinium macrocarpon HOM05D005904 ORTHO05D007074 8.7e-12 73.2 79 54.4
ATR0661G556 Amborella trichopoda HOM05D005904 ORTHO05D007074 3.3e-11 71.2 52 63.5
SEGI_12033 Sequoiadendron giganteum HOM05D005904 ORTHO05D007074 9.6e-11 69.7 50 64.0
CBR_g18726 Chara braunii HOM05D005904 ORTHO05D007074 2.1e-10 68.6 55 56.4
Nn8g38876 Nelumbo nucifera HOM05D005904 ORTHO05D007074 3.7e-10 67.8 50 60.0
Pp3c14_13400 Physcomitrium patens HOM05D005904 ORTHO05D007074 1.4e-09 65.9 52 59.6
Ca_01193_v3 Cicer arietinum L. HOM05D005904 ORTHO05D007074 1.8e-09 65.5 37 81.1
AagrBONN_evm.TU.Sc2ySwM_344.3620 Anthoceros agrestis HOM05D005904 ORTHO05D007074 2.4e-09 65.1 54 55.6
MBI01_g01270_MAGBIO Magnolia biondii HOM05D005904 ORTHO05D007074 2.4e-09 65.1 54 59.3
Mapoly0003s0025 Marchantia polymorpha HOM05D005904 ORTHO05D007074 3.1e-09 64.7 54 57.4
SMO134G0002 Selaginella moellendorffii HOM05D005904 ORTHO05D007074 3.1e-09 64.7 52 59.6
CARHR088470 Cardamine hirsuta HOM05D005904 ORTHO05D007074 5.3e-09 63.9 33 84.8
Atru.chr1.3688 Acer truncatum HOM05D005904 ORTHO05D007074 6.5e-07 57.0 33 75.8
Aa31sc158G40 Aethionema arabicum HOM05D005904 ORTHO05D007074 4.2e-06 54.3 34 73.5


User provided reference genes

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