Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0026641 Camellia sinensis var. sinensis HOM05D006696 ORTHO05D008683 0.0e+00 1247.3 646 100.0
CSS0014714 Camellia sinensis var. sinensis HOM05D006696 ORTHO05D008683 0.0e+00 1216.1 646 97.1
Rhsim01G0149400 Rhododendron simsii HOM05D006696 ORTHO05D008683 2.1e-296 1021.9 647 77.3
Hma1.2p1_0301F.1_g118560 Hydrangea macrophylla HOM05D006696 ORTHO05D008683 3.7e-293 1011.1 579 82.6
vmacro21023 Vaccinium macrocarpon HOM05D006696 ORTHO05D008683 8.6e-290 1000.0 731 68.9
Cc02_g24120 Coffea canephora HOM05D006696 ORTHO05D008683 4.5e-283 977.6 578 79.6
TWI14G1225 Tripterygium wilfordii HOM05D006696 ORTHO05D008683 4.5e-283 977.6 579 78.6
Prupe.2G142200 Prunus persica HOM05D006696 ORTHO05D008683 1.3e-282 976.1 583 78.9
COL.COLO4_24599 Corchorus olitorius HOM05D006696 ORTHO05D008683 5.6e-281 970.7 587 77.5
Gohir.D13G120600 Gossypium hirsutum HOM05D006696 ORTHO05D008683 3.6e-280 968.0 587 78.4
MD07G1119000 Malus domestica HOM05D006696 ORTHO05D008683 6.1e-280 967.2 587 78.2
Gorai.013G134800 Gossypium raimondii HOM05D006696 ORTHO05D008683 8.0e-280 966.8 587 78.2
Gohir.A13G117300 Gossypium hirsutum HOM05D006696 ORTHO05D008683 1.5e-278 962.6 587 77.7
Lj7C531T6 Lonicera japonica HOM05D006696 ORTHO05D008683 1.5e-278 962.6 585 77.9
CiPaw.01G264000 Carya illinoinensis HOM05D006696 ORTHO05D008683 2.6e-278 961.8 590 76.4
Nn6g34076 Nelumbo nucifera HOM05D006696 ORTHO05D008683 3.4e-278 961.4 588 76.9
Thecc.08G173400 Theobroma cacao HOM05D006696 ORTHO05D008683 4.4e-278 961.1 587 77.0
Manes.01G267400 Manihot esculenta HOM05D006696 ORTHO05D008683 1.3e-277 959.5 585 77.1
CAN.G388.34 Capsicum annuum HOM05D006696 ORTHO05D008683 8.3e-277 956.8 583 77.0
Potri.002G146100 Populus trichocarpa HOM05D006696 ORTHO05D008683 1.4e-276 956.1 577 77.6
PGSC0003DMG400025962 Solanum tuberosum HOM05D006696 ORTHO05D008683 1.9e-276 955.7 583 77.5
ClCG05G002380 Citrullus lanatus HOM05D006696 ORTHO05D008683 9.2e-276 953.4 580 76.4
QL08p052869 Quercus lobata HOM05D006696 ORTHO05D008683 2.7e-275 951.8 590 76.1
Nitab4.5_0010616g0010 Nicotiana tabacum HOM05D006696 ORTHO05D008683 7.8e-275 950.3 625 73.1
Sopen01g036880 Solanum pennellii HOM05D006696 ORTHO05D008683 1.0e-274 949.9 583 76.7
TAR629G0060 Trochodendron aralioides HOM05D006696 ORTHO05D008683 1.0e-274 949.9 586 76.3
Peaxi162Scf00013g03019 Petunia axillaris HOM05D006696 ORTHO05D008683 1.3e-274 949.5 581 76.8
Ciclev10019231m.g Citrus clementina HOM05D006696 ORTHO05D008683 1.1e-273 946.4 586 75.6
Solyc01g091130.4 Solanum lycopersicum HOM05D006696 ORTHO05D008683 1.9e-273 945.7 583 76.7
Sabra02G0113800 Salix brachista HOM05D006696 ORTHO05D008683 2.5e-273 945.3 577 76.8
Haze_16792 Corylus avellana HOM05D006696 ORTHO05D008683 4.7e-272 941.0 581 75.7
CsaV3_3G009820 Cucumis sativus L. HOM05D006696 ORTHO05D008683 4.7e-272 941.0 585 74.4
Eucgr.D02468 Eucalyptus grandis HOM05D006696 ORTHO05D008683 2.3e-271 938.7 592 74.7
Atru.chr5.281 Acer truncatum HOM05D006696 ORTHO05D008683 3.1e-271 938.3 588 74.5
Nitab4.5_0000457g0140 Nicotiana tabacum HOM05D006696 ORTHO05D008683 6.8e-271 937.2 611 73.3
Sed0011228 Sechium edule HOM05D006696 ORTHO05D008683 8.9e-271 936.8 580 74.3
MELO3C006203.2 Cucumis melo HOM05D006696 ORTHO05D008683 1.3e-269 932.9 581 74.2
RcHm_v2.0_Chr1g0349711 Rosa chinensis HOM05D006696 ORTHO05D008683 3.5e-267 924.9 586 75.3
Lsat_1_v5_gn_3_132380 Lactuca sativa HOM05D006696 ORTHO05D008683 4.6e-267 924.5 579 75.0
Glyma.03G028100 Glycine max HOM05D006696 ORTHO05D008683 6.0e-267 924.1 580 75.0
EL10Ac1g00866 Beta vulgaris HOM05D006696 ORTHO05D008683 8.6e-266 920.2 586 75.4
THA.LOC104814083 Tarenaya hassleriana HOM05D006696 ORTHO05D008683 1.5e-265 919.5 587 74.4
Lalb_Chr07g0189961 Lupinus albus HOM05D006696 ORTHO05D008683 5.6e-265 917.5 579 74.1
VMungo0331G0021 Vigna mungo HOM05D006696 ORTHO05D008683 1.6e-264 916.0 579 74.1
HanXRQChr03g0093971 Helianthus annuus HOM05D006696 ORTHO05D008683 1.4e-263 912.9 583 73.2
Medtr4g025130 Medicago truncatula HOM05D006696 ORTHO05D008683 1.8e-263 912.5 584 73.3
Aqoxy7G00691 Aquilegia oxysepala HOM05D006696 ORTHO05D008683 3.1e-263 911.8 591 73.9
AUR62004189 Chenopodium quinoa HOM05D006696 ORTHO05D008683 3.1e-263 911.8 578 74.6
Ca_19926_v3 Cicer arietinum L. HOM05D006696 ORTHO05D008683 8.9e-263 910.2 591 73.3
Phvul.010G081400 Phaseolus vulgaris HOM05D006696 ORTHO05D008683 1.5e-262 909.4 579 73.6
Hund27369 Selenicereus undatus HOM05D006696 ORTHO05D008683 2.0e-262 909.1 587 73.3
Aa31LG1G11340 Aethionema arabicum HOM05D006696 ORTHO05D008683 7.6e-262 907.1 577 73.8
arahy.Tifrunner.gnm1.ann1.30BUB6 Arachis hypogaea HOM05D006696 ORTHO05D008683 2.9e-261 905.2 581 73.3
arahy.Tifrunner.gnm1.ann1.PBYD8I Arachis hypogaea HOM05D006696 ORTHO05D008683 3.7e-261 904.8 581 73.1
Ah.05g174590 Amaranthus hybridus HOM05D006696 ORTHO05D008683 6.4e-261 904.0 586 73.4
Psat7g231000 Pisum sativum HOM05D006696 ORTHO05D008683 1.1e-260 903.3 578 74.2
TPR.G7586 Trifolium pratense HOM05D006696 ORTHO05D008683 4.1e-260 901.4 591 72.9
Migut.B01614 Erythranthe guttata HOM05D006696 ORTHO05D008683 7.1e-260 900.6 587 72.6
MSTRG.20736 Avicennia marina HOM05D006696 ORTHO05D008683 6.6e-258 894.0 580 72.6
ECA232G1408 Erigeron canadensis HOM05D006696 ORTHO05D008683 1.1e-257 893.3 584 72.3
SGA_v2.0_scaffold95G28911 Striga asiatica HOM05D006696 ORTHO05D008683 1.1e-257 893.3 587 72.1
Duzib177G0277 Durio zibethinus HOM05D006696 ORTHO05D008683 6.8e-255 884.0 578 73.7
Cpa.g.sc611.2 Carica papaya HOM05D006696 ORTHO05D008683 4.4e-254 881.3 536 76.3
FAN01G1519 Fragaria x ananassa HOM05D006696 ORTHO05D008683 9.9e-254 880.2 583 72.6
FvH4_7g11430 Fragaria vesca HOM05D006696 ORTHO05D008683 2.9e-253 878.6 583 72.7
FAN06G3694 Fragaria x ananassa HOM05D006696 ORTHO05D008683 1.4e-252 876.3 583 72.4
FAN06G1977 Fragaria x ananassa HOM05D006696 ORTHO05D008683 1.9e-252 875.9 583 72.6
FAN03G1153 Fragaria x ananassa HOM05D006696 ORTHO05D008683 2.7e-251 872.1 583 71.7
unitig_22.g5383 Utricularia gibba HOM05D006696 ORTHO05D008683 2.3e-250 869.0 580 70.5
MBI12_g20403_MAGBIO Magnolia biondii HOM05D006696 ORTHO05D008683 5.1e-250 867.8 587 70.5
Sp1g37340 Schrenkiella parvula HOM05D006696 ORTHO05D008683 1.5e-249 866.3 594 71.2
PSO782G1103 Papaver somniferum HOM05D006696 ORTHO05D008683 2.5e-249 865.5 581 72.1
PSO478G1798 Papaver somniferum HOM05D006696 ORTHO05D008683 4.3e-249 864.8 581 72.3
Lj3g0014279 Lotus japonicus HOM05D006696 ORTHO05D008683 7.1e-244 847.4 537 74.1
GSVIVG01027661001 Vitis vinifera HOM05D006696 ORTHO05D008683 1.6e-243 846.3 584 70.4
AL1G10260 Arabidopsis lyrata HOM05D006696 ORTHO05D008683 3.9e-242 841.6 581 69.9
Sc26g0001290 Simmondsia chinensis HOM05D006696 ORTHO05D008683 8.1e-240 833.9 551 72.1
BcaB07g33486 Brassica carinata HOM05D006696 ORTHO05D008683 5.3e-239 831.2 593 69.0
C06p05680 Brassica napus HOM05D006696 ORTHO05D008683 6.9e-239 830.9 596 69.0
AT1G02020 Arabidopsis thaliana HOM05D006696 ORTHO05D008683 3.8e-237 825.1 584 68.2
Carub.0001s0021 Capsella rubella HOM05D006696 ORTHO05D008683 1.9e-236 822.8 580 67.6
BcaC08g43220 Brassica carinata HOM05D006696 ORTHO05D008683 9.3e-236 820.5 597 68.3
BolC6t35679H Brassica oleracea HOM05D006696 ORTHO05D008683 9.3e-236 820.5 597 68.3
A06p03080 Brassica napus HOM05D006696 ORTHO05D008683 7.9e-235 817.4 595 67.9
CDE04G1815 Ceratophyllum demersum HOM05D006696 ORTHO05D008683 5.1e-234 814.7 585 66.3
Thhalv10007140m.g Eutrema salsugineum HOM05D006696 ORTHO05D008683 2.8e-232 808.9 596 66.9
SalBow5G3816 Salvia bowleyana HOM05D006696 ORTHO05D008683 3.7e-232 808.5 545 70.1
Actinidia33475 Actinidia chinensis HOM05D006696 ORTHO05D008683 4.5e-230 801.6 624 66.3
BraA06t23521Z Brassica rapa HOM05D006696 ORTHO05D008683 1.0e-229 800.4 592 67.1
HPP92_022287 Vanilla planifolia HOM05D006696 ORTHO05D008683 2.9e-221 772.3 585 63.4
AUR62013656 Chenopodium quinoa HOM05D006696 ORTHO05D008683 2.3e-218 762.7 577 65.2
ATR0041G020 Amborella trichopoda HOM05D006696 ORTHO05D008683 3.8e-205 718.8 584 61.0
Os10g0190800 Oryza sativa ssp. japonica HOM05D006696 ORTHO05D008683 4.8e-192 675.2 584 59.6
SEGI_31859 Sequoiadendron giganteum HOM05D006696 ORTHO05D008683 1.5e-188 663.7 552 58.9
SMO011G0006 Selaginella moellendorffii HOM05D006696 ORTHO05D008683 2.7e-182 642.9 585 55.9
Zm00001eb145800 Zea mays HOM05D006696 ORTHO05D008683 1.7e-181 640.2 581 57.0
CARHR000330 Cardamine hirsuta HOM05D006696 ORTHO05D008683 2.5e-180 636.3 475 65.5
AagrBONN_evm.TU.Sc2ySwM_228.1723 Anthoceros agrestis HOM05D006696 ORTHO05D008683 1.4e-175 620.5 591 53.6
DCAR_015916 Daucus carota HOM05D006696 ORTHO05D008683 1.2e-171 607.4 373 74.8
Mapoly0117s0009 Marchantia polymorpha HOM05D006696 ORTHO05D008683 4.9e-168 595.5 595 52.4
Pp3c18_8320 Physcomitrium patens HOM05D006696 ORTHO05D008683 1.0e-162 577.8 581 50.1
Solyc01g091140.4 Solanum lycopersicum HOM05D006696 ORTHO05D008683 4.6e-142 509.2 516 53.9
Dinv32364 Davidia involucrata HOM05D006696 ORTHO05D008683 2.1e-126 457.2 256 82.4
CANSAT21G0759 Cannabis sativa HOM05D006696 ORTHO05D008683 1.2e-94 351.7 210 75.7
Oeu037929.1 Olea europaea HOM05D006696 ORTHO05D008683 1.5e-76 291.6 193 71.5
SGA_v2.0_scaffold581G53050 Striga asiatica HOM05D006696 ORTHO05D008683 1.2e-68 265.4 196 64.3
Sopen01g036900 Solanum pennellii HOM05D006696 ORTHO05D008683 2.0e-60 238.0 227 55.5
CARHR000320 Cardamine hirsuta HOM05D006696 ORTHO05D008683 2.0e-49 201.4 107 82.2
Atru.chr4.660 Acer truncatum HOM05D006696 ORTHO05D030753 1.9e-42 178.3 132 62.1
Sopen01g036890 Solanum pennellii HOM05D006696 ORTHO05D008683 3.8e-27 127.5 80 76.2
Zm00001eb027220 Zea mays HOM05D006696 ORTHO05D008683 1.6e-25 122.1 101 54.5
VMungo0720G2385 Vigna mungo HOM05D006696 ORTHO05D008683 4.6e-25 120.6 65 78.5
VMungo1309G0520 Vigna mungo HOM05D006696 ORTHO05D008683 1.1e-23 115.9 78 66.7
Phvul.010G066778 Phaseolus vulgaris HOM05D006696 ORTHO05D008683 6.4e-19 100.1 76 63.2
SalBow5G1567 Salvia bowleyana HOM05D006696 ORTHO05D008683 1.8e-13 82.0 43 86.0
Cpa.g.sc14.75 Carica papaya HOM05D006696 ORTHO05D008683 2.4e-13 81.6 37 94.6
Lsat_1_v5_gn_8_142581 Lactuca sativa HOM05D006696 ORTHO05D030753 4.0e-13 80.9 133 40.6
Atru.chr4.903 Acer truncatum HOM05D006696 ORTHO05D030753 2.2e-11 75.1 39 82.1


User provided reference genes

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