Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0026637 Camellia sinensis var. sinensis HOM05D009540 ORTHO05D000034 5.9e-33 143.7 75 100.0
CSS0025827 Camellia sinensis var. sinensis HOM05D009540 ORTHO05D000034 3.6e-30 134.4 74 93.2
CSS0014554 Camellia sinensis var. sinensis HOM05D009540 ORTHO05D000034 4.7e-30 134.0 74 91.9
CSS0030164 Camellia sinensis var. sinensis HOM05D009540 ORTHO05D000034 6.7e-29 130.2 74 89.2
CSS0027245 Camellia sinensis var. sinensis HOM05D009540 ORTHO05D000034 2.0e-28 128.6 74 89.2
CSS0023479 Camellia sinensis var. sinensis HOM05D009540 ORTHO05D000224 3.3e-28 127.9 74 89.2
CSS0025010 Camellia sinensis var. sinensis HOM05D009540 ORTHO05D000224 3.3e-28 127.9 74 89.2
CSS0033375 Camellia sinensis var. sinensis HOM05D009540 ORTHO05D000034 5.7e-28 127.1 75 89.3
CSS0000410 Camellia sinensis var. sinensis HOM05D009540 ORTHO05D000034 2.2e-27 125.2 70 92.9
CSS0001225 Camellia sinensis var. sinensis HOM05D009540 ORTHO05D000034 6.3e-27 123.6 67 94.0
CSS0007342 Camellia sinensis var. sinensis HOM05D009540 ORTHO05D000034 1.1e-26 122.9 75 85.3
CSS0025076 Camellia sinensis var. sinensis HOM05D009540 ORTHO05D000034 4.1e-26 120.9 69 89.9
CSS0042777 Camellia sinensis var. sinensis HOM05D009540 ORTHO05D000034 1.5e-25 119.0 72 84.7
CSS0014469 Camellia sinensis var. sinensis HOM05D009540 ORTHO05D000034 3.5e-25 117.9 75 82.7
CSS0017223 Camellia sinensis var. sinensis HOM05D009540 ORTHO05D000034 1.1e-23 112.8 67 89.6
CSS0037680 Camellia sinensis var. sinensis HOM05D009540 ORTHO05D000034 1.8e-18 95.5 54 87.0
CSS0012123 Camellia sinensis var. sinensis HOM05D009540 ORTHO05D000034 2.9e-16 88.2 47 95.7
CSS0021854 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 1.6e-14 82.4 74 52.7
CSS0021996 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000224 1.6e-14 82.4 74 52.7
CSS0029449 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 1.6e-14 82.4 74 52.7
CSS0003101 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 2.1e-14 82.0 74 52.7
CSS0019890 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 2.1e-14 82.0 74 52.7
CSS0047776 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 2.1e-14 82.0 74 52.7
CSS0032716 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 2.7e-14 81.6 74 52.7
CSS0002884 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 3.6e-14 81.3 74 51.4
CSS0017003 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 4.7e-14 80.9 74 51.4
CSS0033949 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 4.7e-14 80.9 72 54.2
CSS0044817 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 4.7e-14 80.9 72 54.2
CSS0036987 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 6.1e-14 80.5 74 50.0
CSS0038181 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 6.1e-14 80.5 74 51.4
Rhsim06G0042800 Rhododendron simsii HOM05D000004 ORTHO05D000034 6.1e-14 80.5 66 59.1
RhsimUnG0175100 Rhododendron simsii HOM05D000004 ORTHO05D000224 6.1e-14 80.5 66 59.1
CSS0006373 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 1.4e-13 79.3 71 53.5
CSS0008327 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 1.4e-13 79.3 74 51.4
CSS0022421 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 1.4e-13 79.3 74 50.0
CSS0025145 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000034 1.4e-13 79.3 72 54.2
CSS0000008 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 1.8e-13 79.0 73 52.1
CSS0012883 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 3.0e-13 78.2 70 52.9
CSS0033606 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 3.0e-13 78.2 74 50.0
CSS0043796 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000224 3.0e-13 78.2 69 56.5
CSS0045951 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 3.0e-13 78.2 74 50.0
CSS0011436 Camellia sinensis var. sinensis HOM05D009540 ORTHO05D000224 5.2e-13 77.4 72 51.4
CSS0006141 Camellia sinensis var. sinensis HOM05D009540 ORTHO05D000034 8.8e-13 76.6 42 90.5
CSS0000254 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 1.2e-12 76.3 74 55.4
CSS0034226 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 1.2e-12 76.3 74 55.4
CSS0039855 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 1.2e-12 76.3 72 52.8
CSS0047664 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 1.2e-12 76.3 74 55.4
CSS0015860 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 1.5e-12 75.9 65 60.0
CSS0048163 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 4.4e-12 74.3 72 51.4
CSS0033175 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 9.7e-12 73.2 74 52.7
CSS0039137 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000034 1.7e-11 72.4 72 50.0
QL04p087838 Quercus lobata HOM05D000004 ORTHO05D000002 3.7e-11 71.2 62 58.1
Actinidia34655 Actinidia chinensis HOM05D000004 ORTHO05D000034 4.8e-11 70.9 65 50.8
CSS0030801 Camellia sinensis var. sinensis HOM05D009540 ORTHO05D000034 4.8e-11 70.9 41 85.4
CSS0035454 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D015543 4.8e-11 70.9 64 54.7
Rhsim06G0131400 Rhododendron simsii HOM05D011308 ORTHO05D000224 4.8e-11 70.9 74 45.9
Rhsim06G0119500 Rhododendron simsii HOM05D011308 ORTHO05D000224 1.1e-10 69.7 74 47.3
Atru.chr6.581 Acer truncatum HOM05D000004 ORTHO05D000002 2.4e-10 68.6 71 46.5
Atru.chr9.42 Acer truncatum HOM05D000004 ORTHO05D000002 2.4e-10 68.6 71 46.5
CSS0008415 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000224 2.4e-10 68.6 64 50.0
CSS0031723 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000224 2.4e-10 68.6 64 50.0
Rhsim05G0110500 Rhododendron simsii HOM05D000004 ORTHO05D000002 3.1e-10 68.2 69 47.8
Rhsim08G0114800 Rhododendron simsii HOM05D000004 ORTHO05D000224 3.1e-10 68.2 69 47.8
FvH4_3g35241 Fragaria vesca HOM05D000004 ORTHO05D000002 4.1e-10 67.8 65 47.7
PSO339G4168 Papaver somniferum HOM05D000004 ORTHO05D000224 4.1e-10 67.8 74 47.3
PSO384G2907 Papaver somniferum HOM05D000004 ORTHO05D000224 7.0e-10 67.0 73 45.2
Rhsim02G0151000 Rhododendron simsii HOM05D011308 ORTHO05D000224 7.0e-10 67.0 74 47.3
PSO832G2906 Papaver somniferum HOM05D000004 ORTHO05D000224 1.2e-09 66.2 66 47.0
Rhsim07G0097500 Rhododendron simsii HOM05D000375 ORTHO05D000224 1.2e-09 66.2 62 50.0
PSO210G6535 Papaver somniferum HOM05D000004 ORTHO05D000224 1.6e-09 65.9 66 47.0
PSO782G2227 Papaver somniferum HOM05D000004 ORTHO05D000034 1.6e-09 65.9 66 47.0
CSS0030156 Camellia sinensis var. sinensis HOM05D002151 ORTHO05D002142 2.0e-09 65.5 67 46.3
Hma1.2p1_0038F.1_g024310 Hydrangea macrophylla HOM05D000004 ORTHO05D000224 2.0e-09 65.5 63 47.6
PSO017G2690 Papaver somniferum HOM05D000004 ORTHO05D000224 2.0e-09 65.5 66 47.0
PSO063G4683 Papaver somniferum HOM05D000004 ORTHO05D000002 2.0e-09 65.5 66 47.0
PSO210G5577 Papaver somniferum HOM05D000004 ORTHO05D000002 2.0e-09 65.5 66 47.0
PSO210G6640 Papaver somniferum HOM05D000004 ORTHO05D000224 2.0e-09 65.5 66 47.0
PSO384G1551 Papaver somniferum HOM05D000004 ORTHO05D000224 2.0e-09 65.5 66 47.0
PSO210G2852 Papaver somniferum HOM05D000004 ORTHO05D000224 2.7e-09 65.1 66 45.5
PSO782G4596 Papaver somniferum HOM05D000004 ORTHO05D000224 2.7e-09 65.1 66 48.5
PSO063G2494 Papaver somniferum HOM05D000004 ORTHO05D000224 3.5e-09 64.7 66 47.0
Rhsim08G0139100 Rhododendron simsii HOM05D000004 ORTHO05D000224 3.5e-09 64.7 62 50.0
CSS0004810 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 4.5e-09 64.3 69 46.4
PSO384G2626 Papaver somniferum HOM05D000004 ORTHO05D000034 4.5e-09 64.3 63 49.2
PSO384G3678 Papaver somniferum HOM05D000004 ORTHO05D000002 4.5e-09 64.3 66 45.5
Rhsim05G0059200 Rhododendron simsii HOM05D011494 ORTHO05D000034 4.5e-09 64.3 68 45.6
PSO013G0187 Papaver somniferum HOM05D000004 ORTHO05D000224 5.9e-09 63.9 66 45.5
PSO210G4059 Papaver somniferum HOM05D000004 ORTHO05D000224 5.9e-09 63.9 66 45.5
RhsimUnG0193500 Rhododendron simsii HOM05D000004 ORTHO05D000224 5.9e-09 63.9 62 48.4
CSS0000878 Camellia sinensis var. sinensis HOM05D011494 ORTHO05D016144 7.7e-09 63.5 69 47.8
Rhsim03G0014100 Rhododendron simsii HOM05D011494 ORTHO05D000034 7.7e-09 63.5 67 47.8
CSS0007018 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000224 1.0e-08 63.2 64 48.4
Rhsim06G0100400 Rhododendron simsii HOM05D011308 ORTHO05D000224 1.0e-08 63.2 74 43.2
Rhsim07G0098600 Rhododendron simsii HOM05D000375 ORTHO05D000224 1.0e-08 63.2 62 48.4
CSS0012449 Camellia sinensis var. sinensis HOM05D011494 ORTHO05D016144 1.3e-08 62.8 69 46.4
MBI01_g37335_MAGBIO Magnolia biondii HOM05D009540 ORTHO05D000034 1.3e-08 62.8 65 47.7
Rhsim05G0131300 Rhododendron simsii HOM05D000995 ORTHO05D000638 1.3e-08 62.8 67 46.3
CSS0002976 Camellia sinensis var. sinensis HOM05D009540 ORTHO05D000034 2.2e-08 62.0 39 79.5
FvH4_4g06575 Fragaria vesca HOM05D000004 ORTHO05D000002 2.2e-08 62.0 70 44.3
Oeu036689.1 Olea europaea HOM05D009054 ORTHO05D000034 2.2e-08 62.0 58 51.7
Oeu060138.1 Olea europaea HOM05D000004 ORTHO05D000224 2.2e-08 62.0 58 51.7
vmacro23521 Vaccinium macrocarpon HOM05D000157 ORTHO05D016144 2.2e-08 62.0 69 46.4
Oeu017575.1 Olea europaea HOM05D000004 ORTHO05D000034 2.9e-08 61.6 58 51.7
PSO013G0379 Papaver somniferum HOM05D000004 ORTHO05D000224 2.9e-08 61.6 66 43.9
CSS0013170 Camellia sinensis var. sinensis HOM05D011494 ORTHO05D016144 3.8e-08 61.2 69 44.9
CSS0033607 Camellia sinensis var. sinensis HOM05D011494 ORTHO05D016144 3.8e-08 61.2 69 44.9
CSS0037169 Camellia sinensis var. sinensis HOM05D011494 ORTHO05D016144 3.8e-08 61.2 69 44.9
PSO170G5394 Papaver somniferum HOM05D000004 ORTHO05D000002 3.8e-08 61.2 69 43.5
SHI48849 Sapria himalayana HOM05D000004 ORTHO05D000002 3.8e-08 61.2 68 44.1
CSS0002509 Camellia sinensis var. sinensis HOM05D002151 ORTHO05D002142 5.0e-08 60.8 67 43.3
PSO591G0107 Papaver somniferum HOM05D000004 ORTHO05D000034 5.0e-08 60.8 66 43.9
RhsimUnG0157800 Rhododendron simsii HOM05D000004 ORTHO05D000224 5.0e-08 60.8 69 43.5
Haze_01589 Corylus avellana HOM05D014948 ORTHO05D000034 6.5e-08 60.5 66 47.0
Oeu022659.1 Olea europaea HOM05D000004 ORTHO05D000224 6.5e-08 60.5 58 51.7
Oeu046677.1 Olea europaea HOM05D000004 ORTHO05D000224 6.5e-08 60.5 58 53.4
Oeu061981.1 Olea europaea HOM05D009054 ORTHO05D000034 6.5e-08 60.5 58 50.0
Oeu061602.1 Olea europaea HOM05D009054 ORTHO05D000034 8.5e-08 60.1 58 50.0
Rhsim03G0184300 Rhododendron simsii HOM05D000004 ORTHO05D000224 8.5e-08 60.1 70 40.0
Rhsim07G0155000 Rhododendron simsii HOM05D011494 ORTHO05D016144 8.5e-08 60.1 61 49.2
Rhsim10G0110100 Rhododendron simsii HOM05D011308 ORTHO05D000034 8.5e-08 60.1 74 43.2
Rhsim10G0111000 Rhododendron simsii HOM05D000004 ORTHO05D000034 8.5e-08 60.1 70 40.0
Rhsim11G0020300 Rhododendron simsii HOM05D000004 ORTHO05D000224 8.5e-08 60.1 69 43.5
Oeu036411.1 Olea europaea HOM05D009054 ORTHO05D000034 1.1e-07 59.7 57 50.9
SHI46790 Sapria himalayana HOM05D000004 ORTHO05D000224 1.1e-07 59.7 68 42.6
Haze_04663 Corylus avellana HOM05D014948 ORTHO05D000034 1.5e-07 59.3 66 43.9
Rhsim06G0088500 Rhododendron simsii HOM05D020422 ORTHO05D000224 1.9e-07 58.9 64 42.2
CSS0023953 Camellia sinensis var. sinensis HOM05D011494 ORTHO05D016144 2.5e-07 58.5 69 44.9
RcHm_v2.0_Chr5g0019091 Rosa chinensis HOM05D000004 ORTHO05D000034 2.5e-07 58.5 68 41.2
CSS0022166 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 3.2e-07 58.2 69 42.0
FvH4_3g28463 Fragaria vesca HOM05D011494 ORTHO05D000034 3.2e-07 58.2 69 40.6
Oeu053343.1 Olea europaea HOM05D009054 ORTHO05D000034 3.2e-07 58.2 58 50.0
Rhsim13G0163600 Rhododendron simsii HOM05D000004 ORTHO05D000224 3.2e-07 58.2 69 43.5
FvH4_6g27413 Fragaria vesca HOM05D000004 ORTHO05D000224 4.2e-07 57.8 70 41.4
PGR096G0003 Punica granatum HOM05D000004 ORTHO05D000002 5.5e-07 57.4 64 40.6
Haze_20305 Corylus avellana HOM05D014948 ORTHO05D000034 7.2e-07 57.0 66 42.4
Oeu003531.1 Olea europaea HOM05D009054 ORTHO05D000034 7.2e-07 57.0 54 51.9
Rhsim02G0006400 Rhododendron simsii HOM05D020422 ORTHO05D000224 7.2e-07 57.0 64 40.6
FvH4_5g25163 Fragaria vesca HOM05D000004 ORTHO05D000224 9.4e-07 56.6 70 41.4
Rhsim11G0030500 Rhododendron simsii HOM05D000004 ORTHO05D000224 9.4e-07 56.6 69 40.6
Rhsim11G0091100 Rhododendron simsii HOM05D000004 ORTHO05D000224 9.4e-07 56.6 62 43.5
CSS0026441 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 1.2e-06 56.2 69 42.0
CSS0040223 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 1.2e-06 56.2 69 40.6
FvH4_4g16282 Fragaria vesca HOM05D011494 ORTHO05D000034 1.2e-06 56.2 68 42.6
PSO478G0812 Papaver somniferum HOM05D000004 ORTHO05D000224 1.2e-06 56.2 61 42.6
QL08p035596 Quercus lobata HOM05D000004 ORTHO05D000002 1.2e-06 56.2 66 42.4
MBI02_g02723_MAGBIO Magnolia biondii HOM05D024168 ORTHO05D013556 1.6e-06 55.8 62 45.2
THA.LOC109117280 Tarenaya hassleriana HOM05D000004 ORTHO05D000002 1.6e-06 55.8 72 36.1
PGR068G0002 Punica granatum HOM05D000004 ORTHO05D000034 2.1e-06 55.5 66 37.9
Rhsim10G0127900 Rhododendron simsii HOM05D011308 ORTHO05D000034 2.1e-06 55.5 74 39.2
Hund03425 Selenicereus undatus HOM05D008371 ORTHO05D000224 2.1e-06 55.5 70 40.0
Hund30849 Selenicereus undatus HOM05D000004 ORTHO05D000224 2.1e-06 55.5 70 40.0
THA.LOC104807088 Tarenaya hassleriana HOM05D000004 ORTHO05D000034 2.1e-06 55.5 72 36.1
MBI05_g38605_MAGBIO Magnolia biondii HOM05D000004 ORTHO05D013556 2.7e-06 55.1 62 41.9
CSS0046839 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 3.6e-06 54.7 64 43.8
Dinv24672 Davidia involucrata HOM05D009540 ORTHO05D000034 3.6e-06 54.7 51 49.0
QL05p075262 Quercus lobata HOM05D000004 ORTHO05D000002 3.6e-06 54.7 74 39.2
THA.LOC104815204 Tarenaya hassleriana HOM05D000004 ORTHO05D000034 4.7e-06 54.3 72 33.3
THA.LOC109116329 Tarenaya hassleriana HOM05D000004 ORTHO05D000002 4.7e-06 54.3 72 33.3
Haze_10582 Corylus avellana HOM05D014948 ORTHO05D000034 6.1e-06 53.9 66 40.9
FvH4_4g16178 Fragaria vesca HOM05D000004 ORTHO05D000224 6.1e-06 53.9 63 44.4
Manes.12G054904 Manihot esculenta HOM05D000004 ORTHO05D000034 6.1e-06 53.9 63 42.9
Oeu006584.1 Olea europaea HOM05D009054 ORTHO05D000034 6.1e-06 53.9 59 40.7
TWI63G1549 Tripterygium wilfordii HOM05D000004 ORTHO05D000034 6.1e-06 53.9 63 42.9
Ca_24325_v3 Cicer arietinum L. HOM05D000004 ORTHO05D000002 8.0e-06 53.5 68 41.2
Hma1.2p1_0073F.1_g038590 Hydrangea macrophylla HOM05D000004 ORTHO05D000224 8.0e-06 53.5 64 40.6
Hma1.2p1_1680F.1_g297180 Hydrangea macrophylla HOM05D000004 ORTHO05D000224 8.0e-06 53.5 64 40.6
Hma1.2p1_2793F.1_g328630 Hydrangea macrophylla HOM05D000101 ORTHO05D000089 8.0e-06 53.5 64 40.6
Rhsim05G0170300 Rhododendron simsii HOM05D000111 ORTHO05D000134 8.0e-06 53.5 64 37.5
THA.LOC104800026 Tarenaya hassleriana HOM05D000004 ORTHO05D000034 8.0e-06 53.5 69 36.2


User provided reference genes

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