Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0026631 Camellia sinensis var. sinensis HOM05D006965 ORTHO05D008652 2.1e-202 708.8 347 100.0
Actinidia32338 Actinidia chinensis HOM05D006965 ORTHO05D008652 2.0e-160 569.3 346 80.9
vmacro13617 Vaccinium macrocarpon HOM05D006965 ORTHO05D008652 3.7e-154 548.5 346 76.6
Rhsim07G0050600 Rhododendron simsii HOM05D006965 ORTHO05D008652 6.7e-148 527.7 327 77.4
Manes.10G151000 Manihot esculenta HOM05D006965 ORTHO05D008652 4.4e-131 471.9 345 66.7
Nitab4.5_0000892g0120 Nicotiana tabacum HOM05D006965 ORTHO05D008652 4.4e-131 471.9 347 67.4
CiPaw.13G000900 Carya illinoinensis HOM05D006965 ORTHO05D008652 6.3e-130 468.0 345 67.5
Cfa004805 Carpinus fangiana HOM05D006965 ORTHO05D008652 2.4e-129 466.1 343 67.6
PGSC0003DMG400006312 Solanum tuberosum HOM05D006965 ORTHO05D008652 1.2e-128 463.8 346 65.6
CAN.G261.10 Capsicum annuum HOM05D006965 ORTHO05D008652 1.3e-127 460.3 347 64.3
TAR633G1267 Trochodendron aralioides HOM05D006965 ORTHO05D008652 2.2e-127 459.5 347 67.1
Nitab4.5_0004592g0020 Nicotiana tabacum HOM05D006965 ORTHO05D008652 3.8e-127 458.8 348 65.2
Ciclev10031978m.g Citrus clementina HOM05D006965 ORTHO05D008652 6.5e-127 458.0 349 64.8
Cc02_g27080 Coffea canephora HOM05D006965 ORTHO05D008652 6.5e-127 458.0 345 65.2
QL04p003153 Quercus lobata HOM05D006965 ORTHO05D008652 2.5e-126 456.1 345 65.8
Haze_10398 Corylus avellana HOM05D006965 ORTHO05D008652 9.4e-126 454.1 352 64.8
GSVIVG01001368001 Vitis vinifera HOM05D006965 ORTHO05D008652 1.2e-125 453.8 321 68.5
RcHm_v2.0_Chr1g0313421 Rosa chinensis HOM05D006965 ORTHO05D008652 1.6e-125 453.4 345 65.2
Solyc01g073930.3 Solanum lycopersicum HOM05D006965 ORTHO05D008652 3.6e-125 452.2 346 63.6
Atru.chr11.2694 Acer truncatum HOM05D006965 ORTHO05D008652 4.7e-125 451.8 349 64.8
QL04p000072 Quercus lobata HOM05D006965 ORTHO05D008652 8.0e-125 451.1 345 65.2
Sabra09G0014600 Salix brachista HOM05D006965 ORTHO05D008652 2.3e-124 449.5 345 63.8
MD07G1002700 Malus domestica HOM05D006965 ORTHO05D008652 3.0e-124 449.1 357 61.9
Sopen01g033500 Solanum pennellii HOM05D006965 ORTHO05D008652 3.0e-124 449.1 346 63.9
FAN01G2144 Fragaria x ananassa HOM05D006965 ORTHO05D008652 6.7e-124 448.0 348 63.2
Haze_10419 Corylus avellana HOM05D006965 ORTHO05D008652 8.8e-124 447.6 338 66.3
Haze_10424 Corylus avellana HOM05D006965 ORTHO05D008652 8.8e-124 447.6 338 66.3
QL04p003146 Quercus lobata HOM05D006965 ORTHO05D008652 2.0e-123 446.4 345 65.2
MSTRG.17063 Avicennia marina HOM05D006965 ORTHO05D008652 2.6e-123 446.0 351 64.4
THA.LOC104827577 Tarenaya hassleriana HOM05D006965 ORTHO05D008652 2.6e-123 446.0 350 61.7
Thecc.01G416200 Theobroma cacao HOM05D006965 ORTHO05D008652 3.3e-123 445.7 353 63.5
Gohir.A08G026760 Gossypium hirsutum HOM05D006965 ORTHO05D008652 4.8e-122 441.8 352 63.4
FvH4_7g00170 Fragaria vesca HOM05D006965 ORTHO05D008652 6.3e-122 441.4 366 60.7
MD02G1318500 Malus domestica HOM05D006965 ORTHO05D008652 1.4e-121 440.3 343 62.4
Gohir.D08G037500 Gossypium hirsutum HOM05D006965 ORTHO05D008652 1.8e-121 439.9 352 63.1
Gorai.004G035500 Gossypium raimondii HOM05D006965 ORTHO05D008652 4.1e-121 438.7 352 63.4
Nn2g15664 Nelumbo nucifera HOM05D006965 ORTHO05D008652 5.3e-121 438.3 345 63.8
Potri.009G023200 Populus trichocarpa HOM05D006965 ORTHO05D008652 7.0e-121 438.0 345 62.9
ECA248G1794 Erigeron canadensis HOM05D006965 ORTHO05D008652 3.5e-120 435.6 346 62.1
CANSAT78G1981 Cannabis sativa HOM05D006965 ORTHO05D008652 4.5e-120 435.3 348 62.4
Dinv43490 Davidia involucrata HOM05D006965 ORTHO05D008652 3.8e-119 432.2 272 79.0
Sc12g0002350 Simmondsia chinensis HOM05D006965 ORTHO05D008652 3.8e-119 432.2 343 60.3
Migut.B01364 Erythranthe guttata HOM05D006965 ORTHO05D008652 2.5e-118 429.5 344 62.2
CsaV3_3G032450 Cucumis sativus L. HOM05D006965 ORTHO05D008652 3.2e-118 429.1 345 60.3
PSO339G5860 Papaver somniferum HOM05D006965 ORTHO05D008652 1.2e-117 427.2 345 59.1
TAR362G1148 Trochodendron aralioides HOM05D006965 ORTHO05D008652 2.1e-117 426.4 320 69.4
Lj3g0017203 Lotus japonicus HOM05D006965 ORTHO05D008652 3.6e-117 425.6 349 61.9
AL4G43420 Arabidopsis lyrata HOM05D006965 ORTHO05D008652 6.1e-117 424.9 350 60.9
BcaB02g08813 Brassica carinata HOM05D006965 ORTHO05D008652 6.1e-117 424.9 348 58.9
ClCG10G012640 Citrullus lanatus HOM05D006965 ORTHO05D008652 1.0e-116 424.1 354 59.9
PSO384G4145 Papaver somniferum HOM05D006965 ORTHO05D008652 4.0e-116 422.2 345 58.6
TPR.G11733 Trifolium pratense HOM05D006965 ORTHO05D008652 5.2e-116 421.8 347 61.1
Lalb_Chr25g0283521 Lupinus albus HOM05D006965 ORTHO05D008652 1.5e-115 420.2 345 60.6
Thhalv10001527m.g Eutrema salsugineum HOM05D006965 ORTHO05D008652 3.4e-115 419.1 348 58.3
SalBow5G3371 Salvia bowleyana HOM05D006965 ORTHO05D008652 2.8e-114 416.0 322 62.1
Phvul.005G039600 Phaseolus vulgaris HOM05D006965 ORTHO05D008652 3.7e-114 415.6 349 60.5
MBI04_g33895_MAGBIO Magnolia biondii HOM05D006965 ORTHO05D008652 4.8e-114 415.2 345 59.4
Psat1g128200 Pisum sativum HOM05D006965 ORTHO05D008652 4.8e-114 415.2 345 60.0
BcaC02g12316 Brassica carinata HOM05D006965 ORTHO05D008652 2.4e-113 412.9 348 58.0
A05p04570 Brassica napus HOM05D006965 ORTHO05D008652 2.4e-113 412.9 350 58.6
C04p05300 Brassica napus HOM05D006965 ORTHO05D008652 2.4e-113 412.9 348 58.0
BraA05t19431Z Brassica rapa HOM05D006965 ORTHO05D008652 2.4e-113 412.9 350 58.6
Eucgr.G02572 Eucalyptus grandis HOM05D006965 ORTHO05D008652 3.1e-113 412.5 347 59.9
Sed0016917 Sechium edule HOM05D006965 ORTHO05D008652 9.1e-113 411.0 346 59.2
FAN06G0111 Fragaria x ananassa HOM05D006965 ORTHO05D008652 3.5e-112 409.1 347 59.7
FAN10G4273 Fragaria x ananassa HOM05D006965 ORTHO05D008652 3.5e-112 409.1 366 57.7
Sp4g26490 Schrenkiella parvula HOM05D006965 ORTHO05D008652 5.9e-112 408.3 348 57.8
Glyma.08G149400 Glycine max HOM05D006965 ORTHO05D008652 1.3e-111 407.1 346 60.4
MELO3C023943.2 Cucumis melo HOM05D006965 ORTHO05D008652 1.7e-111 406.8 345 58.3
Carub.0004s2700 Capsella rubella HOM05D006965 ORTHO05D008652 5.0e-111 405.2 350 56.3
Medtr2g060820 Medicago truncatula HOM05D006965 ORTHO05D008652 5.0e-111 405.2 323 60.7
SGA_v2.0_scaffold5G03114 Striga asiatica HOM05D006965 ORTHO05D008652 6.5e-111 404.8 344 58.4
AT2G44420 Arabidopsis thaliana HOM05D006965 ORTHO05D008652 2.5e-110 402.9 379 55.9
AUR62012162 Chenopodium quinoa HOM05D006965 ORTHO05D008652 4.2e-110 402.1 345 59.4
BolC4t22170H Brassica oleracea HOM05D006965 ORTHO05D008652 2.1e-109 399.8 372 54.3
Aa31LG1G25970 Aethionema arabicum HOM05D006965 ORTHO05D008652 8.0e-109 397.9 365 53.7
TWI73G0408 Tripterygium wilfordii HOM05D006965 ORTHO05D008652 2.3e-108 396.4 346 59.0
Aqoxy1G00028 Aquilegia oxysepala HOM05D006965 ORTHO05D008652 1.2e-107 394.0 345 56.5
Hma1.2p1_2998F.1_g331493 Hydrangea macrophylla HOM05D006965 ORTHO05D008652 3.4e-107 392.5 255 75.3
VMungo1080G1640 Vigna mungo HOM05D006965 ORTHO05D008652 3.4e-107 392.5 329 60.2
Hma1.2p1_2998F.1_g331496 Hydrangea macrophylla HOM05D006965 ORTHO05D008652 7.5e-107 391.3 252 75.8
PGR004G0492 Punica granatum HOM05D006965 ORTHO05D008652 7.5e-107 391.3 320 62.2
Ca_02931_v3 Cicer arietinum L. HOM05D006965 ORTHO05D008652 1.7e-106 390.2 325 59.7
FAN01G0465 Fragaria x ananassa HOM05D006965 ORTHO05D008652 1.7e-106 390.2 338 58.3
AUR62022798 Chenopodium quinoa HOM05D006965 ORTHO05D008652 2.0e-104 383.3 344 57.3
Hund16040 Selenicereus undatus HOM05D006965 ORTHO05D008652 2.9e-103 379.4 338 57.1
Prupe.2G004200 Prunus persica HOM05D006965 ORTHO05D008652 1.9e-102 376.7 276 64.5
HanXRQChr01g0018681 Helianthus annuus HOM05D006965 ORTHO05D008652 2.4e-97 359.8 344 54.1
ATR0605G047 Amborella trichopoda HOM05D006965 ORTHO05D008652 2.0e-96 356.7 343 54.8
Lsat_1_v5_gn_1_110081 Lactuca sativa HOM05D006965 ORTHO05D008652 7.3e-94 348.2 306 59.5
EL10Ac2g04673 Beta vulgaris HOM05D006965 ORTHO05D008652 1.8e-92 343.6 312 58.3
Ah.16g102760 Amaranthus hybridus HOM05D006965 ORTHO05D008652 5.2e-92 342.0 344 53.5
unitig_26.g9594 Utricularia gibba HOM05D001227 ORTHO05D001082 9.2e-89 331.3 350 51.4
FAN03G0167 Fragaria x ananassa HOM05D006965 ORTHO05D008652 2.7e-88 329.7 250 64.4
Zm00001eb275720 Zea mays HOM05D006965 ORTHO05D008652 3.5e-88 329.3 333 53.2
Peaxi162Scf00878g00321 Petunia axillaris HOM05D006965 ORTHO05D008652 7.3e-86 321.6 268 61.2
Os06g0618150 Oryza sativa ssp. japonica HOM05D006965 ORTHO05D008652 3.6e-85 319.3 328 51.8
Duzib114G0529 Durio zibethinus HOM05D006965 ORTHO05D008652 7.5e-83 311.6 351 48.7
COL.COLO4_23913 Corchorus olitorius HOM05D006280 ORTHO05D008652 2.9e-82 309.7 215 68.4
CDE05G0249 Ceratophyllum demersum HOM05D006965 ORTHO05D008652 8.1e-77 291.6 253 55.7
DCAR_029603 Daucus carota HOM05D006965 ORTHO05D008652 3.1e-68 263.1 312 48.7
Cfa022003 Carpinus fangiana HOM05D006965 ORTHO05D008652 5.2e-68 262.3 247 57.9
CARHR139580 Cardamine hirsuta HOM05D006965 ORTHO05D008652 1.1e-65 254.6 184 62.0
Mapoly0087s0073 Marchantia polymorpha HOM05D006965 ORTHO05D008652 1.1e-65 254.6 353 41.1
HPP92_002651 Vanilla planifolia HOM05D006965 ORTHO05D008652 2.4e-65 253.4 238 52.5
arahy.Tifrunner.gnm1.ann1.Z1UMC7 Arachis hypogaea HOM05D006965 ORTHO05D008652 3.5e-64 249.6 215 60.9
arahy.Tifrunner.gnm1.ann1.ZJD8NP Arachis hypogaea HOM05D006965 ORTHO05D008652 5.8e-59 232.3 243 53.5
Eucgr.L03457 Eucalyptus grandis HOM05D006965 ORTHO05D008652 8.1e-45 185.3 130 63.8
SEGI_12556 Sequoiadendron giganteum HOM05D006965 ORTHO05D008652 1.9e-41 174.1 126 61.1
Oeu009369.1 Olea europaea HOM05D006965 ORTHO05D008652 1.0e-34 151.8 146 50.7
SMO132G0001 Selaginella moellendorffii HOM05D006965 ORTHO05D008652 1.0e-34 151.8 317 34.7
Haze_10414 Corylus avellana HOM05D006965 ORTHO05D008652 1.4e-33 147.9 100 69.0
SMO147G0191 Selaginella moellendorffii HOM05D020017 ORTHO05D022314 5.9e-27 125.9 220 35.0
TPR.G14363 Trifolium pratense HOM05D006965 ORTHO05D008652 7.9e-16 89.0 70 60.0
Cpa.g.sc189.20 Carica papaya HOM05D006965 ORTHO05D008652 3.0e-15 87.0 74 55.4
Cpa.g.sc189.19 Carica papaya HOM05D006965 ORTHO05D008652 9.1e-12 75.5 84 56.0


User provided reference genes

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