Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0026606 Camellia sinensis var. sinensis HOM05D007275 ORTHO05D009279 5.5e-36 153.7 73 100.0
CSS0010422 Camellia sinensis var. sinensis HOM05D007275 ORTHO05D009279 2.8e-32 141.4 68 100.0
Actinidia22145 Actinidia chinensis HOM05D007275 ORTHO05D009279 2.1e-27 125.2 68 86.8
Dinv38844 Davidia involucrata HOM05D007275 ORTHO05D009279 4.7e-27 124.0 68 83.8
Ciclev10024283m.g Citrus clementina HOM05D007275 ORTHO05D009279 4.4e-25 117.5 68 79.4
Prupe.5G117300 Prunus persica HOM05D007275 ORTHO05D009279 5.7e-25 117.1 68 80.9
CSS0024458 Camellia sinensis var. sinensis HOM05D007275 ORTHO05D009279 7.5e-25 116.7 68 80.9
GSVIVG01019513001 Vitis vinifera HOM05D007275 ORTHO05D009279 1.3e-24 115.9 68 77.9
QL02p030913 Quercus lobata HOM05D007275 ORTHO05D009279 2.8e-24 114.8 68 77.9
Thecc.03G296000 Theobroma cacao HOM05D007275 ORTHO05D009279 2.8e-24 114.8 68 77.9
MD14G1123400 Malus domestica HOM05D007275 ORTHO05D009279 3.7e-24 114.4 68 77.9
Phvul.002G297500 Phaseolus vulgaris HOM05D007275 ORTHO05D009279 4.9e-24 114.0 68 77.9
Cc08_g15930 Coffea canephora HOM05D007275 ORTHO05D009279 6.3e-24 113.6 68 77.9
Hma1.2p1_0359F.1_g135280 Hydrangea macrophylla HOM05D007275 ORTHO05D009279 6.3e-24 113.6 68 77.9
Eucgr.D01727 Eucalyptus grandis HOM05D007275 ORTHO05D009279 1.4e-23 112.5 67 76.1
Gohir.D11G024100 Gossypium hirsutum HOM05D007275 ORTHO05D009279 1.4e-23 112.5 68 75.0
Gohir.D12G236900 Gossypium hirsutum HOM05D007275 ORTHO05D009279 1.4e-23 112.5 68 75.0
Gorai.007G025800 Gossypium raimondii HOM05D007275 ORTHO05D009279 1.4e-23 112.5 68 75.0
Gorai.008G253500 Gossypium raimondii HOM05D007275 ORTHO05D009279 1.4e-23 112.5 68 75.0
MD06G1104700 Malus domestica HOM05D007275 ORTHO05D009279 1.4e-23 112.5 68 76.5
Nn1g01839 Nelumbo nucifera HOM05D007275 ORTHO05D009279 1.4e-23 112.5 68 76.5
Atru.chr9.2015 Acer truncatum HOM05D007275 ORTHO05D009279 1.8e-23 112.1 69 76.8
COL.COLO4_10681 Corchorus olitorius HOM05D007275 ORTHO05D009279 1.8e-23 112.1 68 76.5
Gohir.A11G024400 Gossypium hirsutum HOM05D007275 ORTHO05D009279 1.8e-23 112.1 68 75.0
Lj4g0015273 Lotus japonicus HOM05D007275 ORTHO05D009279 1.8e-23 112.1 68 76.5
Potri.001G092700 Populus trichocarpa HOM05D007275 ORTHO05D009279 1.8e-23 112.1 68 76.5
Sc01g0010220 Simmondsia chinensis HOM05D007275 ORTHO05D009279 1.8e-23 112.1 68 75.0
Gohir.A12G235700 Gossypium hirsutum HOM05D007275 ORTHO05D009279 3.1e-23 111.3 68 73.5
Cfa012796 Carpinus fangiana HOM05D007275 ORTHO05D009279 7.0e-23 110.2 69 78.3
Glyma.08G022200 Glycine max HOM05D007275 ORTHO05D009279 7.0e-23 110.2 68 75.0
Sabra01G0069000 Salix brachista HOM05D007275 ORTHO05D009279 7.0e-23 110.2 68 75.0
Glyma.05G216300 Glycine max HOM05D007275 ORTHO05D009279 9.1e-23 109.8 68 76.5
Nn3g19047 Nelumbo nucifera HOM05D007275 ORTHO05D009279 9.1e-23 109.8 68 73.5
RcHm_v2.0_Chr7g0195121 Rosa chinensis HOM05D007275 ORTHO05D009279 9.1e-23 109.8 68 77.9
Medtr8g099385 Medicago truncatula HOM05D007275 ORTHO05D009279 1.2e-22 109.4 67 76.1
TPR.G3422 Trifolium pratense HOM05D007275 ORTHO05D009279 1.2e-22 109.4 67 77.6
Nitab4.5_0000726g0090 Nicotiana tabacum HOM05D007275 ORTHO05D009279 1.6e-22 109.0 65 75.4
Nitab4.5_0007661g0010 Nicotiana tabacum HOM05D007275 ORTHO05D009279 1.6e-22 109.0 65 75.4
Peaxi162Scf00074g01033 Petunia axillaris HOM05D007275 ORTHO05D009279 1.6e-22 109.0 63 79.4
arahy.Tifrunner.gnm1.ann1.IALD8X Arachis hypogaea HOM05D007275 ORTHO05D009279 2.0e-22 108.6 68 70.6
AUR62010827 Chenopodium quinoa HOM05D007275 ORTHO05D009279 2.7e-22 108.2 68 72.1
Nitab4.5_0010144g0020 Nicotiana tabacum HOM05D007275 ORTHO05D009279 2.7e-22 108.2 68 73.5
PGR031G2423 Punica granatum HOM05D007275 ORTHO05D009279 2.7e-22 108.2 68 72.1
CAN.G532.107 Capsicum annuum HOM05D007275 ORTHO05D009279 3.5e-22 107.8 68 73.5
MBI06_g46619_MAGBIO Magnolia biondii HOM05D007275 ORTHO05D009279 3.5e-22 107.8 68 73.5
MBI06_g46730_MAGBIO Magnolia biondii HOM05D007275 ORTHO05D000022 3.5e-22 107.8 68 73.5
TAR375G1117 Trochodendron aralioides HOM05D007275 ORTHO05D009279 3.5e-22 107.8 68 75.0
DCAR_005035 Daucus carota HOM05D007275 ORTHO05D009279 4.5e-22 107.5 69 75.4
Oeu038573.1 Olea europaea HOM05D007275 ORTHO05D009279 4.5e-22 107.5 68 73.5
Sabra03G0100000 Salix brachista HOM05D007275 ORTHO05D009279 4.5e-22 107.5 68 72.1
arahy.Tifrunner.gnm1.ann1.GQP3LI Arachis hypogaea HOM05D007275 ORTHO05D009279 5.9e-22 107.1 68 69.1
AUR62019826 Chenopodium quinoa HOM05D007275 ORTHO05D009279 5.9e-22 107.1 68 72.1
Peaxi162Scf00117g01123 Petunia axillaris HOM05D007275 ORTHO05D009279 5.9e-22 107.1 68 72.1
Manes.02G011100 Manihot esculenta HOM05D007275 ORTHO05D009279 7.7e-22 106.7 69 75.4
Ah.12g052450 Amaranthus hybridus HOM05D006525 ORTHO05D007845 1.0e-21 106.3 68 70.6
Hma1.2p1_0229F.1_g097175 Hydrangea macrophylla HOM05D007275 ORTHO05D009279 1.3e-21 105.9 69 72.5
Hma1.2p1_0229F.1_g097200 Hydrangea macrophylla HOM05D007275 ORTHO05D009279 1.3e-21 105.9 69 72.5
EL10Ac5g12903 Beta vulgaris HOM05D007275 ORTHO05D009279 1.7e-21 105.5 68 69.1
Oeu063532.1 Olea europaea HOM05D007275 ORTHO05D009279 1.7e-21 105.5 73 71.2
Haze_08628 Corylus avellana HOM05D007275 ORTHO05D009279 2.3e-21 105.1 69 73.9
FvH4_5g04420 Fragaria vesca HOM05D007275 ORTHO05D009279 2.3e-21 105.1 69 73.9
FAN18G1142 Fragaria x ananassa HOM05D007275 ORTHO05D009279 2.3e-21 105.1 69 73.9
FAN18G2266 Fragaria x ananassa HOM05D007275 ORTHO05D009279 2.3e-21 105.1 69 73.9
Nitab4.5_0000223g0330 Nicotiana tabacum HOM05D007275 ORTHO05D009279 2.3e-21 105.1 68 72.1
SalBow1G0766 Salvia bowleyana HOM05D007275 ORTHO05D009279 2.3e-21 105.1 68 70.6
SalBow1G5261 Salvia bowleyana HOM05D007275 ORTHO05D009279 2.3e-21 105.1 68 70.6
FAN08G0060 Fragaria x ananassa HOM05D007275 ORTHO05D009279 2.9e-21 104.8 68 73.5
Potri.003G138800 Populus trichocarpa HOM05D007275 ORTHO05D009279 2.9e-21 104.8 68 69.1
Solyc08g082160.3 Solanum lycopersicum HOM05D007275 ORTHO05D009279 3.8e-21 104.4 68 72.1
Sopen08g030440 Solanum pennellii HOM05D007275 ORTHO05D009279 3.8e-21 104.4 68 72.1
PGSC0003DMG400012158 Solanum tuberosum HOM05D007275 ORTHO05D009279 3.8e-21 104.4 68 70.6
CiPaw.12G084200 Carya illinoinensis HOM05D007275 ORTHO05D009279 5.0e-21 104.0 68 70.6
CANSAT21G2355 Cannabis sativa HOM05D007275 ORTHO05D009279 1.1e-20 102.8 66 74.2
Lalb_Chr16g0390621 Lupinus albus HOM05D007275 ORTHO05D009279 3.3e-20 101.3 68 66.2
TAR629G0721 Trochodendron aralioides HOM05D007275 ORTHO05D010861 4.2e-20 100.9 69 71.0
Migut.A00668 Erythranthe guttata HOM05D007275 ORTHO05D009279 9.5e-20 99.8 64 71.9
Dinv37542 Davidia involucrata HOM05D007275 ORTHO05D009279 3.6e-19 97.8 56 80.4
FvH4_3g01740 Fragaria vesca HOM05D007275 ORTHO05D009279 6.1e-19 97.1 69 68.1
TWI60G1254 Tripterygium wilfordii HOM05D007275 ORTHO05D009279 8.0e-19 96.7 68 64.7
ECA246G4125 Erigeron canadensis HOM05D007275 ORTHO05D009279 2.3e-18 95.1 67 62.7
Aqoxy7G00131 Aquilegia oxysepala HOM05D007275 ORTHO05D009279 3.0e-18 94.7 68 64.7
Lsat_1_v5_gn_3_10301 Lactuca sativa HOM05D007275 ORTHO05D009279 8.9e-18 93.2 68 61.8
CDE10G0242 Ceratophyllum demersum HOM05D000974 ORTHO05D002201 1.2e-17 92.8 68 63.2
HanXRQChr06g0166541 Helianthus annuus HOM05D007275 ORTHO05D009279 1.2e-17 92.8 64 64.1
HanXRQChr17g0535191 Helianthus annuus HOM05D007275 ORTHO05D009279 1.2e-17 92.8 68 60.3
Rhsim02G0242000 Rhododendron simsii HOM05D007275 ORTHO05D009279 1.5e-17 92.4 60 80.0
ClCG07G014960 Citrullus lanatus HOM05D007275 ORTHO05D009279 2.6e-17 91.7 62 64.5
unitig_748.g8124 Utricularia gibba HOM05D007275 ORTHO05D009279 2.6e-17 91.7 64 67.2
FAN13G1788 Fragaria x ananassa HOM05D007275 ORTHO05D009279 3.4e-17 91.3 97 52.6
BcaC09g50944 Brassica carinata HOM05D007275 ORTHO05D009279 2.8e-16 88.2 67 56.7
A01p15130 Brassica napus HOM05D007275 ORTHO05D009279 2.8e-16 88.2 67 56.7
C01p19030 Brassica napus HOM05D007275 ORTHO05D009279 2.8e-16 88.2 67 56.7
BolC1t01829H Brassica oleracea HOM05D007275 ORTHO05D009279 2.8e-16 88.2 67 56.7
ATR0320G041 Amborella trichopoda HOM05D007275 ORTHO05D009279 3.7e-16 87.8 63 63.5
CsaV3_4G006490 Cucumis sativus L. HOM05D007275 ORTHO05D009279 6.3e-16 87.0 68 58.8
BcaNung01088 Brassica carinata HOM05D007275 ORTHO05D009279 8.3e-16 86.7 67 56.7
BcaNung01089 Brassica carinata HOM05D007275 ORTHO05D009279 8.3e-16 86.7 67 56.7
MELO3C032816.2 Cucumis melo HOM05D007275 ORTHO05D009279 2.4e-15 85.1 67 58.2
Zm00001eb338790 Zea mays HOM05D007275 ORTHO05D009279 4.1e-15 84.3 69 59.4
Sed0004885 Sechium edule HOM05D007275 ORTHO05D009279 9.2e-15 83.2 68 60.3
Psat7g026480 Pisum sativum HOM05D007275 ORTHO05D009279 1.2e-14 82.8 67 61.2
CDE10G0124 Ceratophyllum demersum HOM05D007275 ORTHO05D009279 5.9e-14 80.5 56 64.3
FAN04G0348 Fragaria x ananassa HOM05D007275 ORTHO05D009279 1.0e-13 79.7 54 72.2
SEGI_25349 Sequoiadendron giganteum HOM05D007275 ORTHO05D009279 1.7e-13 79.0 67 52.2
Duzib068G1121 Durio zibethinus HOM05D007275 ORTHO05D009279 9.5e-12 73.2 44 77.3
Hma1.2p1_2596F.1_g325120 Hydrangea macrophylla HOM05D007275 ORTHO05D009279 2.8e-11 71.6 42 78.6
Lalb_Chr16g0390631 Lupinus albus HOM05D007275 ORTHO05D009279 2.0e-09 65.5 42 71.4
Thhalv10027148m.g Eutrema salsugineum HOM05D007275 ORTHO05D009279 4.1e-07 57.8 42 61.9


User provided reference genes

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