Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0026602 Camellia sinensis var. sinensis HOM05D000046 ORTHO05D112622 2.2e-31 138.3 67 100.0
Rhsim08G0068100 Rhododendron simsii HOM05D000046 ORTHO05D001818 9.3e-14 79.7 63 60.3
vmacro18201 Vaccinium macrocarpon HOM05D000046 ORTHO05D001818 1.8e-12 75.5 57 63.2
Dinv33740 Davidia involucrata HOM05D000046 ORTHO05D001818 1.9e-11 72.0 63 58.7
CSS0008020 Camellia sinensis var. sinensis HOM05D000046 ORTHO05D001818 4.3e-11 70.9 61 60.7
Haze_14559 Corylus avellana HOM05D000046 ORTHO05D001818 4.8e-10 67.4 63 55.6
QL02p081332 Quercus lobata HOM05D000046 ORTHO05D001818 6.2e-10 67.0 63 54.0
Dinv06527 Davidia involucrata HOM05D000046 ORTHO05D001818 1.8e-09 65.5 61 55.7
CSS0046190 Camellia sinensis var. sinensis HOM05D000046 ORTHO05D001818 2.4e-09 65.1 32 87.5
TAR622G1070 Trochodendron aralioides HOM05D000046 ORTHO05D001818 4.0e-09 64.3 62 54.8
TWI60G0088 Tripterygium wilfordii HOM05D000046 ORTHO05D001818 2.6e-08 61.6 69 49.3
TAR374G1122 Trochodendron aralioides HOM05D000046 ORTHO05D001818 4.5e-08 60.8 62 53.2
Eucgr.J02135 Eucalyptus grandis HOM05D000046 ORTHO05D001818 7.6e-08 60.1 68 51.5
Potri.004G129000 Populus trichocarpa HOM05D000046 ORTHO05D001818 7.6e-08 60.1 55 49.1
CANSAT64G2184 Cannabis sativa HOM05D000046 ORTHO05D001818 1.3e-07 59.3 58 50.0
Prupe.3G270000 Prunus persica HOM05D000046 ORTHO05D001818 1.3e-07 59.3 64 48.4
Hund05912 Selenicereus undatus HOM05D000046 ORTHO05D001818 1.7e-07 58.9 64 48.4
TWI32G0336 Tripterygium wilfordii HOM05D000046 ORTHO05D001818 1.7e-07 58.9 71 50.7
TWI32G1026 Tripterygium wilfordii HOM05D000046 ORTHO05D001818 1.7e-07 58.9 71 50.7
Lsat_1_v5_gn_4_177241 Lactuca sativa HOM05D000046 ORTHO05D001818 2.2e-07 58.5 63 49.2
Atru.chr8.1912 Acer truncatum HOM05D000046 ORTHO05D001818 2.9e-07 58.2 80 43.8
CiPaw.04G018500 Carya illinoinensis HOM05D000046 ORTHO05D001818 2.9e-07 58.2 63 47.6
Ciclev10011575m.g Citrus clementina HOM05D000046 ORTHO05D001818 2.9e-07 58.2 76 44.7
Duzib147G1017 Durio zibethinus HOM05D000046 ORTHO05D001818 2.9e-07 58.2 63 47.6
HanXRQChr09g0265451 Helianthus annuus HOM05D000046 ORTHO05D001818 2.9e-07 58.2 61 49.2
Sabra08G0147900 Salix brachista HOM05D000046 ORTHO05D001818 6.5e-07 57.0 44 56.8
TAR305G0004 Trochodendron aralioides HOM05D000046 ORTHO05D001818 6.5e-07 57.0 54 48.1
Gorai.012G055500 Gossypium raimondii HOM05D000046 ORTHO05D001818 8.4e-07 56.6 62 45.2
Gohir.D04G050100 Gossypium hirsutum HOM05D000046 ORTHO05D001818 1.1e-06 56.2 62 45.2
Manes.17G021150 Manihot esculenta HOM05D000046 ORTHO05D001818 1.1e-06 56.2 68 45.6
RcHm_v2.0_Chr2g0168861 Rosa chinensis HOM05D000046 ORTHO05D001818 1.1e-06 56.2 63 47.6
Aqoxy3G00767 Aquilegia oxysepala HOM05D000046 ORTHO05D001818 1.4e-06 55.8 71 43.7
AUR62026252 Chenopodium quinoa HOM05D000046 ORTHO05D001818 1.4e-06 55.8 58 46.6
AUR62026444 Chenopodium quinoa HOM05D000046 ORTHO05D001818 1.4e-06 55.8 58 46.6
Potri.008G194700 Populus trichocarpa HOM05D000046 ORTHO05D001818 1.9e-06 55.5 60 46.7
Oeu011691.2 Olea europaea HOM05D000046 ORTHO05D001818 2.5e-06 55.1 65 43.1
Peaxi162Scf00026g02312 Petunia axillaris HOM05D000046 ORTHO05D001818 2.5e-06 55.1 63 47.6
Potri.017G077300 Populus trichocarpa HOM05D000046 ORTHO05D001818 2.5e-06 55.1 60 45.0
Thecc.04G078100 Theobroma cacao HOM05D000046 ORTHO05D001818 2.5e-06 55.1 66 48.5
Hund25270 Selenicereus undatus HOM05D000046 ORTHO05D001818 3.2e-06 54.7 67 47.8
EL10Ac6g13148 Beta vulgaris HOM05D000046 ORTHO05D001818 4.2e-06 54.3 60 46.7
Nn4g23047 Nelumbo nucifera HOM05D000046 ORTHO05D001818 5.5e-06 53.9 58 44.8
Potri.010G033800 Populus trichocarpa HOM05D000046 ORTHO05D001818 5.5e-06 53.9 62 46.8
Sabra04G0089100 Salix brachista HOM05D000046 ORTHO05D001818 5.5e-06 53.9 55 43.6
Sopen01g006430 Solanum pennellii HOM05D000046 ORTHO05D001818 5.5e-06 53.9 63 44.4
PGSC0003DMG400000856 Solanum tuberosum HOM05D000046 ORTHO05D001818 5.5e-06 53.9 63 44.4
SalBow1G4640 Salvia bowleyana HOM05D000046 ORTHO05D001818 7.1e-06 53.5 64 45.3
SalBow8G0759 Salvia bowleyana HOM05D000046 ORTHO05D001818 7.1e-06 53.5 67 41.8
HanXRQChr15g0487931 Helianthus annuus HOM05D000046 ORTHO05D001818 9.3e-06 53.1 62 43.5
MBI12_g09047_MAGBIO Magnolia biondii HOM05D000046 ORTHO05D001818 9.3e-06 53.1 63 49.2
TAR481G0002 Trochodendron aralioides HOM05D000046 ORTHO05D001818 9.3e-06 53.1 62 48.4
TAR629G3275 Trochodendron aralioides HOM05D000046 ORTHO05D001818 9.3e-06 53.1 62 48.4


User provided reference genes

Program Settings