Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0026588 Camellia sinensis var. sinensis HOM05D003432 ORTHO05D009553 3.6e-86 321.6 171 100.0
CSS0000636 Camellia sinensis var. sinensis HOM05D003432 ORTHO05D009553 5.0e-64 248.1 143 90.9
Rhsim07G0019000 Rhododendron simsii HOM05D003432 ORTHO05D009553 8.3e-51 204.1 135 80.0
vmacro13320 Vaccinium macrocarpon HOM05D003432 ORTHO05D009553 1.1e-47 193.7 156 68.6
CiPaw.02G027500 Carya illinoinensis HOM05D003432 ORTHO05D009553 4.0e-45 185.3 143 66.4
Actinidia38307 Actinidia chinensis HOM05D003432 ORTHO05D009553 1.2e-44 183.7 143 68.5
Hma1.2p1_0001F.1_g001730 Hydrangea macrophylla HOM05D003432 ORTHO05D009553 4.4e-44 181.8 135 71.1
QL08p049983 Quercus lobata HOM05D003432 ORTHO05D009553 9.9e-44 180.6 135 69.6
Manes.01G260500 Manihot esculenta HOM05D003432 ORTHO05D009553 6.4e-43 177.9 143 62.9
GSVIVG01026819001 Vitis vinifera HOM05D003432 ORTHO05D009553 8.4e-43 177.6 144 65.3
Potri.014G079500 Populus trichocarpa HOM05D003432 ORTHO05D009553 2.4e-42 176.0 139 63.3
Prupe.2G159500 Prunus persica HOM05D003432 ORTHO05D009553 1.2e-41 173.7 135 64.4
TAR629G1659 Trochodendron aralioides HOM05D003432 ORTHO05D009553 2.1e-41 172.9 144 61.8
TWI59G0087 Tripterygium wilfordii HOM05D003432 ORTHO05D009553 3.5e-41 172.2 143 60.8
Cfa004211 Carpinus fangiana HOM05D003432 ORTHO05D009553 7.8e-41 171.0 135 64.4
Nitab4.5_0006669g0010 Nicotiana tabacum HOM05D003432 ORTHO05D009553 1.0e-40 170.6 132 67.4
MSTRG.4870 Avicennia marina HOM05D003432 ORTHO05D009553 1.3e-40 170.2 137 65.7
Migut.B01709 Erythranthe guttata HOM05D003432 ORTHO05D009553 1.3e-40 170.2 135 63.0
Cc02_g37450 Coffea canephora HOM05D003432 ORTHO05D009553 1.7e-40 169.9 143 60.8
Nitab4.5_0001251g0050 Nicotiana tabacum HOM05D003432 ORTHO05D009553 5.1e-40 168.3 132 66.7
MD01G1048500 Malus domestica HOM05D003432 ORTHO05D009553 1.1e-39 167.2 135 64.4
Atru.chr5.440 Acer truncatum HOM05D003432 ORTHO05D009553 2.1e-38 162.9 135 62.2
FvH4_7g13540 Fragaria vesca HOM05D003432 ORTHO05D009553 6.2e-38 161.4 143 60.8
CANSAT56G1745 Cannabis sativa HOM05D003432 ORTHO05D009553 8.1e-38 161.0 135 60.7
FAN01G0987 Fragaria x ananassa HOM05D003432 ORTHO05D009553 1.4e-37 160.2 143 60.8
Duzib268G1484 Durio zibethinus HOM05D003432 ORTHO05D009553 1.8e-37 159.8 135 58.5
FAN10G2212 Fragaria x ananassa HOM05D003432 ORTHO05D009553 1.8e-37 159.8 143 60.8
Gohir.D11G090900 Gossypium hirsutum HOM05D003432 ORTHO05D009553 1.8e-37 159.8 144 59.7
Gorai.007G096900 Gossypium raimondii HOM05D003432 ORTHO05D009553 1.8e-37 159.8 144 59.7
FAN10G1796 Fragaria x ananassa HOM05D003432 ORTHO05D009553 2.4e-37 159.5 143 60.1
CAN.G78.16 Capsicum annuum HOM05D003432 ORTHO05D009553 6.9e-37 157.9 135 61.5
Sc02g0002140 Simmondsia chinensis HOM05D003432 ORTHO05D009553 6.9e-37 157.9 148 56.8
Gohir.A11G086700 Gossypium hirsutum HOM05D003432 ORTHO05D009553 1.2e-36 157.1 144 59.0
FAN03G0726 Fragaria x ananassa HOM05D003432 ORTHO05D009553 1.5e-36 156.8 143 60.1
Potri.002G155700 Populus trichocarpa HOM05D003432 ORTHO05D009553 2.6e-36 156.0 154 56.5
PGR042G2329 Punica granatum HOM05D003432 ORTHO05D009553 2.6e-36 156.0 145 60.0
PGSC0003DMG401000019 Solanum tuberosum HOM05D003432 ORTHO05D009553 2.6e-36 156.0 135 61.5
Dinv43778 Davidia involucrata HOM05D003432 ORTHO05D009553 5.8e-36 154.8 143 59.4
Eucgr.E00188 Eucalyptus grandis HOM05D003432 ORTHO05D009553 5.8e-36 154.8 145 58.6
Sabra02G0123800 Salix brachista HOM05D003432 ORTHO05D009553 7.6e-36 154.5 165 52.1
FAN06G3453 Fragaria x ananassa HOM05D003432 ORTHO05D009553 9.9e-36 154.1 130 62.3
COL.COLO4_12600 Corchorus olitorius HOM05D003432 ORTHO05D009553 1.3e-35 153.7 134 58.2
RcHm_v2.0_Chr1g0353101 Rosa chinensis HOM05D003432 ORTHO05D009553 1.3e-35 153.7 135 60.0
Nn1g01421 Nelumbo nucifera HOM05D003432 ORTHO05D009553 1.7e-35 153.3 133 61.7
SalBow5G2488 Salvia bowleyana HOM05D005332 ORTHO05D006861 1.7e-35 153.3 133 63.9
FAN06G2249 Fragaria x ananassa HOM05D003432 ORTHO05D009553 2.2e-35 152.9 130 62.3
SalBow5G4657 Salvia bowleyana HOM05D005332 ORTHO05D006861 4.9e-35 151.8 133 63.9
Thecc.01G365400 Theobroma cacao HOM05D003432 ORTHO05D009553 4.9e-35 151.8 135 57.0
SGA_v2.0_scaffold43G16446 Striga asiatica HOM05D005332 ORTHO05D006861 8.4e-35 151.0 137 59.9
Sed0022298 Sechium edule HOM05D003432 ORTHO05D009553 1.1e-34 150.6 138 59.4
Sopen01g037980 Solanum pennellii HOM05D003432 ORTHO05D009553 1.1e-34 150.6 135 59.3
TPR.G17601 Trifolium pratense HOM05D003432 ORTHO05D009553 1.4e-34 150.2 135 57.8
Duzib138G1165 Durio zibethinus HOM05D003432 ORTHO05D009553 1.9e-34 149.8 132 58.3
Glyma.09G263200 Glycine max HOM05D003432 ORTHO05D009553 3.2e-34 149.1 148 57.4
Cpa.g.sc37.45 Carica papaya HOM05D003432 ORTHO05D009553 4.2e-34 148.7 135 57.8
CsaV3_6G005770 Cucumis sativus L. HOM05D003432 ORTHO05D009553 4.2e-34 148.7 138 58.7
Lj1g0020563 Lotus japonicus HOM05D003432 ORTHO05D009553 4.2e-34 148.7 135 57.8
Glyma.18G229000 Glycine max HOM05D003432 ORTHO05D009553 2.7e-33 146.0 135 58.5
Medtr7g076600 Medicago truncatula HOM05D003432 ORTHO05D009553 3.5e-33 145.6 135 55.6
VMungo1383G0671 Vigna mungo HOM05D003432 ORTHO05D009553 3.5e-33 145.6 135 60.0
Ciclev10021526m.g Citrus clementina HOM05D003432 ORTHO05D009553 1.0e-32 144.1 135 59.3
VMungo1383G3405 Vigna mungo HOM05D003432 ORTHO05D009553 1.0e-32 144.1 135 59.3
MELO3C022534.2 Cucumis melo HOM05D003432 ORTHO05D009553 1.7e-32 143.3 132 59.1
Phvul.008G069000 Phaseolus vulgaris HOM05D003432 ORTHO05D009553 3.9e-32 142.1 135 60.0
MBI18_g45104_MAGBIO Magnolia biondii HOM05D003432 ORTHO05D009553 1.1e-31 140.6 144 55.6
Duzib133G1383 Durio zibethinus HOM05D003432 ORTHO05D009553 1.5e-31 140.2 147 51.7
Ca_07881_v3 Cicer arietinum L. HOM05D003432 ORTHO05D009553 1.9e-31 139.8 135 53.3
Lalb_Chr01g0021091 Lupinus albus HOM05D003432 ORTHO05D009553 3.3e-31 139.0 135 54.8
Haze_15199 Corylus avellana HOM05D003432 ORTHO05D009553 5.6e-31 138.3 99 70.7
Peaxi162Scf00397g00522 Petunia axillaris HOM05D003432 ORTHO05D009553 1.3e-30 137.1 118 62.7
ATR0680G243 Amborella trichopoda HOM05D003432 ORTHO05D009553 2.8e-30 136.0 144 51.4
ECA236G2211 Erigeron canadensis HOM05D003432 ORTHO05D009553 2.8e-30 136.0 148 52.0
Psat3g111800 Pisum sativum HOM05D003432 ORTHO05D009553 6.2e-30 134.8 135 53.3
Sabra14G0057800 Salix brachista HOM05D003432 ORTHO05D009553 3.1e-29 132.5 133 53.4
AUR62022760 Chenopodium quinoa HOM05D003432 ORTHO05D009553 6.9e-29 131.3 135 52.6
arahy.Tifrunner.gnm1.ann1.YEH8SC Arachis hypogaea HOM05D003432 ORTHO05D009553 1.5e-28 130.2 144 52.8
HanXRQChr04g0121681 Helianthus annuus HOM05D003432 ORTHO05D009553 2.6e-28 129.4 142 50.7
Oeu056346.1 Olea europaea HOM05D003432 ORTHO05D009553 4.5e-28 128.6 100 66.0
arahy.Tifrunner.gnm1.ann1.AIRX6Z Arachis hypogaea HOM05D003432 ORTHO05D009553 7.6e-28 127.9 135 54.1
AUR62004309 Chenopodium quinoa HOM05D003432 ORTHO05D009553 1.7e-27 126.7 135 50.4
ClCG06G000040 Citrullus lanatus HOM05D003432 ORTHO05D009553 4.9e-27 125.2 170 45.3
EL10Ac1g00520 Beta vulgaris HOM05D003432 ORTHO05D009553 1.4e-26 123.6 135 49.6
unitig_22.g6807 Utricularia gibba HOM05D003432 ORTHO05D009553 2.7e-25 119.4 140 50.7
Ah.05g176340 Amaranthus hybridus HOM05D003432 ORTHO05D009553 2.3e-24 116.3 144 50.0
Lsat_1_v5_gn_7_5341 Lactuca sativa HOM05D003432 ORTHO05D009553 1.1e-23 114.0 133 51.1
PSO478G4595 Papaver somniferum HOM05D003432 ORTHO05D009553 9.6e-23 110.9 145 49.7
Solyc01g094180.4 Solanum lycopersicum HOM05D003432 ORTHO05D009553 2.8e-22 109.4 102 59.8
SEGI_12179 Sequoiadendron giganteum HOM05D003432 ORTHO05D009553 1.8e-21 106.7 137 46.7
PSO782G0809 Papaver somniferum HOM05D003432 ORTHO05D009553 3.1e-21 105.9 135 48.9
PSO782G1297 Papaver somniferum HOM05D003432 ORTHO05D009553 3.1e-21 105.9 135 48.9
PSO782G4791 Papaver somniferum HOM05D003432 ORTHO05D009553 3.1e-21 105.9 135 48.9
Oeu053293.1 Olea europaea HOM05D003432 ORTHO05D009553 6.9e-21 104.8 84 63.1
Zm00001eb185770 Zea mays HOM05D003432 ORTHO05D009553 1.5e-20 103.6 135 43.0
SHI06917 Sapria himalayana HOM05D003432 ORTHO05D009553 2.0e-20 103.2 134 46.3
CDE05G1977 Ceratophyllum demersum HOM05D003432 ORTHO05D009553 7.6e-20 101.3 128 49.2
Os02g0640200 Oryza sativa ssp. japonica HOM05D003432 ORTHO05D009553 1.7e-19 100.1 141 45.4
Lj9A579T29 Lonicera japonica HOM05D003432 ORTHO05D009553 1.9e-18 96.7 51 90.2
Medtr1g047620 Medicago truncatula HOM05D003432 ORTHO05D009553 6.7e-16 88.2 57 66.7
Glyma.19G039400 Glycine max HOM05D003432 ORTHO05D009553 7.4e-15 84.7 50 80.0
Dinv42421 Davidia involucrata HOM05D003432 ORTHO05D009615 9.0e-13 77.8 141 37.6
SEGI_12213 Sequoiadendron giganteum HOM05D003432 ORTHO05D009615 1.5e-12 77.0 145 33.8
Actinidia39631 Actinidia chinensis HOM05D003432 ORTHO05D009615 3.4e-12 75.9 138 40.6
CSS0004751 Camellia sinensis var. sinensis HOM05D003432 ORTHO05D009615 5.8e-12 75.1 141 38.3
CSS0032426 Camellia sinensis var. sinensis HOM05D003432 ORTHO05D009615 5.8e-12 75.1 141 38.3
MBI19_g29886_MAGBIO Magnolia biondii HOM05D003432 ORTHO05D009615 1.0e-11 74.3 173 30.6
Nitab4.5_0007773g0030 Nicotiana tabacum HOM05D003432 ORTHO05D009615 1.3e-11 73.9 141 37.6
AUR62028283 Chenopodium quinoa HOM05D003432 ORTHO05D009615 1.7e-11 73.6 139 36.0
AUR62025280 Chenopodium quinoa HOM05D003432 ORTHO05D009615 2.9e-11 72.8 135 39.3
AagrBONN_evm.TU.Sc2ySwM_228.4870 Anthoceros agrestis HOM05D003432 ORTHO05D009615 3.8e-11 72.4 148 35.1
GSVIVG01015033001 Vitis vinifera HOM05D003432 ORTHO05D009615 5.0e-11 72.0 143 37.1
COL.COLO4_21226 Corchorus olitorius HOM05D003432 ORTHO05D009615 8.4e-11 71.2 141 36.2
Cc06_g12560 Coffea canephora HOM05D003432 ORTHO05D009615 1.1e-10 70.9 142 33.1
Duzib168G1658 Durio zibethinus HOM05D003432 ORTHO05D009615 1.9e-10 70.1 143 37.1
Hund27310 Selenicereus undatus HOM05D003432 ORTHO05D009553 2.5e-10 69.7 50 64.0
Gohir.D05G036700 Gossypium hirsutum HOM05D003432 ORTHO05D009615 3.2e-10 69.3 145 35.9
Manes.16G091300 Manihot esculenta HOM05D003432 ORTHO05D009615 3.2e-10 69.3 136 35.3
TAR626G1143 Trochodendron aralioides HOM05D003432 ORTHO05D009615 3.2e-10 69.3 145 34.5
Cpa.g.sc261.4 Carica papaya HOM05D003432 ORTHO05D009615 4.2e-10 68.9 141 37.6
Gorai.009G037200 Gossypium raimondii HOM05D003432 ORTHO05D009615 4.2e-10 68.9 145 35.9
Rhsim05G0003900 Rhododendron simsii HOM05D000736 ORTHO05D009615 4.2e-10 68.9 143 36.4
Gohir.A05G035200 Gossypium hirsutum HOM05D003432 ORTHO05D009615 9.3e-10 67.8 143 35.0
Manes.03G043800 Manihot esculenta HOM05D003432 ORTHO05D009615 1.2e-09 67.4 143 35.0
Nitab4.5_0001565g0090 Nicotiana tabacum HOM05D003432 ORTHO05D009615 1.2e-09 67.4 141 36.2
TAR468G0013 Trochodendron aralioides HOM05D003432 ORTHO05D009615 1.6e-09 67.0 157 33.1
PGR142G4000 Punica granatum HOM05D003432 ORTHO05D009615 2.1e-09 66.6 142 32.4
Nn8g38560 Nelumbo nucifera HOM05D003432 ORTHO05D009615 3.5e-09 65.9 153 32.0
Potri.006G138400 Populus trichocarpa HOM05D003432 ORTHO05D009615 3.5e-09 65.9 141 31.9
arahy.Tifrunner.gnm1.ann1.67NTJL Arachis hypogaea HOM05D003432 ORTHO05D009615 4.6e-09 65.5 136 33.8
arahy.Tifrunner.gnm1.ann1.XGY8H1 Arachis hypogaea HOM05D003432 ORTHO05D009615 4.6e-09 65.5 136 33.8
Eucgr.C00779 Eucalyptus grandis HOM05D003432 ORTHO05D009615 4.6e-09 65.5 143 35.0
Dinv25526 Davidia involucrata HOM05D003432 ORTHO05D009615 1.0e-08 64.3 152 33.6
Lalb_Chr11g0074061 Lupinus albus HOM05D003432 ORTHO05D009615 1.0e-08 64.3 136 32.4
Sabra06G0108200 Salix brachista HOM05D003432 ORTHO05D009615 1.0e-08 64.3 141 31.9
EL10Ac8g19015 Beta vulgaris HOM05D003432 ORTHO05D009615 1.3e-08 63.9 134 35.1
CiPaw.03G202800 Carya illinoinensis HOM05D003432 ORTHO05D009615 1.3e-08 63.9 136 33.8
Migut.L01588 Erythranthe guttata HOM05D003432 ORTHO05D009615 1.3e-08 63.9 139 36.7
Ciclev10009188m.g Citrus clementina HOM05D003432 ORTHO05D009615 1.8e-08 63.5 141 34.0
Prupe.2G154400 Prunus persica HOM05D003432 ORTHO05D336120 1.8e-08 63.5 61 55.7
MSTRG.26491 Avicennia marina HOM05D003432 ORTHO05D009615 2.3e-08 63.2 141 32.6
Phvul.009G224600 Phaseolus vulgaris HOM05D003432 ORTHO05D009615 3.0e-08 62.8 136 32.4
ATR0681G122 Amborella trichopoda HOM05D003432 ORTHO05D009615 3.9e-08 62.4 148 32.4
CAN.G52.10 Capsicum annuum HOM05D003432 ORTHO05D009615 6.7e-08 61.6 143 32.2
FvH4_1g09130 Fragaria vesca HOM05D003432 ORTHO05D009615 8.7e-08 61.2 143 34.3
FAN19G1389 Fragaria x ananassa HOM05D003432 ORTHO05D009615 8.7e-08 61.2 143 34.3
FAN26G1641 Fragaria x ananassa HOM05D003432 ORTHO05D009615 8.7e-08 61.2 143 34.3
vmacro17099 Vaccinium macrocarpon HOM05D003432 ORTHO05D009615 8.7e-08 61.2 133 35.3
FAN23G2743 Fragaria x ananassa HOM05D003432 ORTHO05D009615 1.1e-07 60.8 143 34.3
FAN26G2439 Fragaria x ananassa HOM05D003432 ORTHO05D009615 1.1e-07 60.8 143 34.3
FAN26G2501 Fragaria x ananassa HOM05D003432 ORTHO05D009615 1.1e-07 60.8 143 34.3
FAN28G1002 Fragaria x ananassa HOM05D003432 ORTHO05D009615 1.1e-07 60.8 143 34.3
Lj6g0008353 Lotus japonicus HOM05D003432 ORTHO05D009615 1.5e-07 60.5 138 32.6
RcHm_v2.0_Chr2g0095521 Rosa chinensis HOM05D003432 ORTHO05D009615 1.5e-07 60.5 143 32.9
SGA_v2.0_scaffold21G09538 Striga asiatica HOM05D003432 ORTHO05D009615 1.5e-07 60.5 141 30.5
Atru.chr7.1749 Acer truncatum HOM05D003432 ORTHO05D009615 1.9e-07 60.1 140 31.4
CDE05G1221 Ceratophyllum demersum HOM05D003432 ORTHO05D009615 1.9e-07 60.1 136 34.6
SMO244G0097 Selaginella moellendorffii HOM05D003432 ORTHO05D009615 1.9e-07 60.1 136 29.4
Thecc.09G072100 Theobroma cacao HOM05D003432 ORTHO05D009615 1.9e-07 60.1 141 32.6
Haze_26048 Corylus avellana HOM05D003432 ORTHO05D009615 3.3e-07 59.3 141 31.9
Medtr2g043370 Medicago truncatula HOM05D003432 ORTHO05D009615 3.3e-07 59.3 138 34.8
MELO3C015545.2 Cucumis melo HOM05D003432 ORTHO05D009615 4.3e-07 58.9 149 33.6
FAN28G0794 Fragaria x ananassa HOM05D003432 ORTHO05D009615 4.3e-07 58.9 143 34.3
MD02G1096900 Malus domestica HOM05D003432 ORTHO05D009615 4.3e-07 58.9 136 33.8
ClCG03G014820 Citrullus lanatus HOM05D002686 ORTHO05D003222 5.7e-07 58.5 148 33.1
CsaV3_1G041330 Cucumis sativus L. HOM05D003432 ORTHO05D009615 5.7e-07 58.5 149 33.6
Glyma.15G181300 Glycine max HOM05D003432 ORTHO05D009615 5.7e-07 58.5 136 29.4
Lsat_1_v5_gn_7_35340 Lactuca sativa HOM05D003432 ORTHO05D009615 7.4e-07 58.2 141 28.4
Mapoly0052s0131 Marchantia polymorpha HOM05D003432 ORTHO05D009615 7.4e-07 58.2 155 29.0
Peaxi162Scf00776g00113 Petunia axillaris HOM05D003432 ORTHO05D009615 7.4e-07 58.2 141 34.0
QL11p001636 Quercus lobata HOM05D003432 ORTHO05D009615 7.4e-07 58.2 141 33.3
Sed0019831 Sechium edule HOM05D003432 ORTHO05D009615 7.4e-07 58.2 148 32.4
TWI34G0487 Tripterygium wilfordii HOM05D003432 ORTHO05D009615 9.7e-07 57.8 140 30.7
Ca_18397_v3 Cicer arietinum L. HOM05D003432 ORTHO05D009615 1.3e-06 57.4 136 30.1
Sopen07g021910 Solanum pennellii HOM05D003432 ORTHO05D009615 1.3e-06 57.4 141 31.2
MD15G1221700 Malus domestica HOM05D003432 ORTHO05D009615 1.6e-06 57.0 136 32.4
Prupe.7G194000 Prunus persica HOM05D003432 ORTHO05D009615 2.2e-06 56.6 136 30.9
VMungo1309G2248 Vigna mungo HOM05D003432 ORTHO05D009615 2.2e-06 56.6 136 29.4
Psat1g135440 Pisum sativum HOM05D003432 ORTHO05D009615 2.8e-06 56.2 136 30.9
Hund08851 Selenicereus undatus HOM05D003432 ORTHO05D009615 2.8e-06 56.2 139 33.8
PGSC0003DMG400002390 Solanum tuberosum HOM05D003432 ORTHO05D009615 2.8e-06 56.2 142 31.7
Oeu055337.3 Olea europaea HOM05D003432 ORTHO05D009615 4.8e-06 55.5 133 33.8
PSO421G0180 Papaver somniferum HOM05D003432 ORTHO05D009615 4.8e-06 55.5 141 29.8
HanXRQChr03g0060051 Helianthus annuus HOM05D003432 ORTHO05D009615 6.3e-06 55.1 57 43.9


User provided reference genes

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