Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0026575 Camellia sinensis var. sinensis HOM05D003760 ORTHO05D020255 9.2e-47 189.9 97 100.0
vmacro15463 Vaccinium macrocarpon HOM05D003760 ORTHO05D004672 4.9e-24 114.4 76 76.3
Rhsim02G0042300 Rhododendron simsii HOM05D003760 ORTHO05D004672 1.2e-22 109.8 76 73.7
Potri.001G026100 Populus trichocarpa HOM05D003760 ORTHO05D004672 1.8e-21 105.9 76 72.4
PSO339G5967 Papaver somniferum HOM05D003760 ORTHO05D004672 2.3e-21 105.5 76 72.4
PSO384G0478 Papaver somniferum HOM05D003760 ORTHO05D004672 2.3e-21 105.5 76 72.4
Sed0003663 Sechium edule HOM05D003760 ORTHO05D004672 2.3e-21 105.5 76 71.1
Nn2g14898 Nelumbo nucifera HOM05D003760 ORTHO05D004672 3.0e-21 105.1 76 71.1
Sed0017009 Sechium edule HOM05D003760 ORTHO05D004672 3.0e-21 105.1 76 69.7
Sc10g0004370 Simmondsia chinensis HOM05D003760 ORTHO05D004672 3.0e-21 105.1 76 71.1
Sabra03G0148000 Salix brachista HOM05D003760 ORTHO05D004672 3.9e-21 104.8 76 71.1
TWI63G0088 Tripterygium wilfordii HOM05D003760 ORTHO05D004672 3.9e-21 104.8 76 69.7
TAR633G0271 Trochodendron aralioides HOM05D003760 ORTHO05D004672 3.9e-21 104.8 76 71.1
Actinidia39916 Actinidia chinensis HOM05D003760 ORTHO05D004672 5.1e-21 104.4 76 75.0
ClCG01G007720 Citrullus lanatus HOM05D003760 ORTHO05D004672 5.1e-21 104.4 76 69.7
TAR633G2507 Trochodendron aralioides HOM05D003760 ORTHO05D004672 5.1e-21 104.4 76 69.7
CAN.G220.44 Capsicum annuum HOM05D003760 ORTHO05D004672 6.7e-21 104.0 76 72.4
GSVIVG01000658001 Vitis vinifera HOM05D003760 ORTHO05D004672 6.7e-21 104.0 76 69.7
VMungo0464G1704 Vigna mungo HOM05D003760 ORTHO05D004672 1.1e-20 103.2 76 71.1
Potri.003G199301 Populus trichocarpa HOM05D003760 ORTHO05D004672 1.5e-20 102.8 76 69.7
Potri.T126106 Populus trichocarpa HOM05D003760 ORTHO05D004672 1.5e-20 102.8 76 69.7
Dinv09260 Davidia involucrata HOM05D003760 ORTHO05D004672 1.9e-20 102.4 76 68.4
Lalb_Chr08g0234711 Lupinus albus HOM05D003760 ORTHO05D004672 1.9e-20 102.4 76 72.4
MBI13_g01615_MAGBIO Magnolia biondii HOM05D003760 ORTHO05D004672 1.9e-20 102.4 76 71.1
MELO3C005125.2 Cucumis melo HOM05D003760 ORTHO05D004672 2.5e-20 102.1 76 68.4
Nitab4.5_0001681g0070 Nicotiana tabacum HOM05D003760 ORTHO05D004672 2.5e-20 102.1 75 66.7
Phvul.004G157800 Phaseolus vulgaris HOM05D003760 ORTHO05D004672 2.5e-20 102.1 76 69.7
Cpa.g.sc223.12 Carica papaya HOM05D003760 ORTHO05D004672 3.3e-20 101.7 76 69.7
FvH4_7g02780 Fragaria vesca HOM05D003760 ORTHO05D004672 3.3e-20 101.7 76 69.7
FAN06G0531 Fragaria x ananassa HOM05D003760 ORTHO05D004672 3.3e-20 101.7 76 69.7
Glyma.07G090900 Glycine max HOM05D003760 ORTHO05D004672 3.3e-20 101.7 76 69.7
Lj9C655T7 Lonicera japonica HOM05D003760 ORTHO05D004672 3.3e-20 101.7 76 68.4
Sabra01G0019300 Salix brachista HOM05D003760 ORTHO05D004672 3.3e-20 101.7 76 68.4
TAR636G0376 Trochodendron aralioides HOM05D003760 ORTHO05D004672 3.3e-20 101.7 76 68.4
Atru.chr12.1379 Acer truncatum HOM05D003760 ORTHO05D004672 4.3e-20 101.3 76 69.7
MSTRG.20523 Avicennia marina HOM05D003760 ORTHO05D004672 4.3e-20 101.3 76 69.7
Eucgr.G03244 Eucalyptus grandis HOM05D003760 ORTHO05D004672 4.3e-20 101.3 76 68.4
FAN01G2043 Fragaria x ananassa HOM05D003760 ORTHO05D004672 4.3e-20 101.3 76 68.4
FAN03G0077 Fragaria x ananassa HOM05D003760 ORTHO05D004672 4.3e-20 101.3 76 68.4
Solyc09g090400.4 Solanum lycopersicum HOM05D003760 ORTHO05D004672 4.3e-20 101.3 76 71.1
Sopen09g033310 Solanum pennellii HOM05D003760 ORTHO05D004672 4.3e-20 101.3 76 71.1
arahy.Tifrunner.gnm1.ann1.88C8QI Arachis hypogaea HOM05D003760 ORTHO05D004672 5.6e-20 100.9 76 69.7
arahy.Tifrunner.gnm1.ann1.R8F3HD Arachis hypogaea HOM05D003760 ORTHO05D004672 5.6e-20 100.9 76 69.7
CiPaw.13G012300 Carya illinoinensis HOM05D003760 ORTHO05D004672 5.6e-20 100.9 76 71.1
Glyma.09G185000 Glycine max HOM05D003760 ORTHO05D004672 5.6e-20 100.9 76 69.7
Migut.B01218 Erythranthe guttata HOM05D003760 ORTHO05D004672 7.4e-20 100.5 76 67.1
FAN10G4281 Fragaria x ananassa HOM05D003760 ORTHO05D004672 7.4e-20 100.5 76 68.4
SGA_v2.0_scaffold124G33635 Striga asiatica HOM05D003760 ORTHO05D004672 7.4e-20 100.5 76 65.8
CsaV3_5G024790 Cucumis sativus L. HOM05D003760 ORTHO05D004672 9.6e-20 100.1 76 67.1
vmacro22865 Vaccinium macrocarpon HOM05D003760 ORTHO05D004672 9.6e-20 100.1 76 68.4
Ca_02468_v3 Cicer arietinum L. HOM05D003760 ORTHO05D004672 1.3e-19 99.8 76 69.7
Prupe.2G032300 Prunus persica HOM05D003760 ORTHO05D004672 1.3e-19 99.8 76 65.8
RcHm_v2.0_Chr1g0322021 Rosa chinensis HOM05D003760 ORTHO05D004672 1.3e-19 99.8 76 67.1
Sabra12G0005200 Salix brachista HOM05D003760 ORTHO05D020255 1.3e-19 99.8 76 67.1
CSS0033000 Camellia sinensis var. sinensis HOM05D003760 ORTHO05D004672 1.6e-19 99.4 76 65.8
Peaxi162Scf00602g00420 Petunia axillaris HOM05D003760 ORTHO05D004672 1.6e-19 99.4 76 71.1
Cc02_g29710 Coffea canephora HOM05D003760 ORTHO05D004672 2.1e-19 99.0 76 63.2
Dinv32036 Davidia involucrata HOM05D003760 ORTHO05D004672 2.1e-19 99.0 76 67.1
HanXRQChr12g0382881 Helianthus annuus HOM05D003760 ORTHO05D004672 2.1e-19 99.0 76 64.5
Nitab4.5_0001425g0120 Nicotiana tabacum HOM05D003760 ORTHO05D004672 2.1e-19 99.0 76 71.1
Nitab4.5_0006936g0020 Nicotiana tabacum HOM05D003760 ORTHO05D004672 2.1e-19 99.0 76 71.1
PGSC0003DMG400017207 Solanum tuberosum HOM05D003760 ORTHO05D004672 2.1e-19 99.0 76 69.7
AUR62043363 Chenopodium quinoa HOM05D003760 ORTHO05D004672 2.8e-19 98.6 76 67.1
Ciclev10005415m.g Citrus clementina HOM05D003760 ORTHO05D004672 2.8e-19 98.6 76 67.1
ECA233G5140 Erigeron canadensis HOM05D003760 ORTHO05D004672 2.8e-19 98.6 76 61.8
Rhsim07G0066200 Rhododendron simsii HOM05D003760 ORTHO05D004672 2.8e-19 98.6 76 67.1
Hund21541 Selenicereus undatus HOM05D003760 ORTHO05D004672 2.8e-19 98.6 76 67.1
AUR62033839 Chenopodium quinoa HOM05D003760 ORTHO05D004672 3.7e-19 98.2 76 67.1
Manes.04G165800 Manihot esculenta HOM05D003760 ORTHO05D004672 3.7e-19 98.2 76 67.1
Psat3g180400 Pisum sativum HOM05D003760 ORTHO05D020255 3.7e-19 98.2 89 61.8
QL04p014453 Quercus lobata HOM05D003760 ORTHO05D004672 3.7e-19 98.2 76 68.4
QL04p014818 Quercus lobata HOM05D003760 ORTHO05D004672 3.7e-19 98.2 76 68.4
Aqoxy2G00338 Aquilegia oxysepala HOM05D003760 ORTHO05D004672 4.8e-19 97.8 77 67.5
QL06p019987 Quercus lobata HOM05D003760 ORTHO05D004672 4.8e-19 97.8 76 69.7
Ah.11g039100 Amaranthus hybridus HOM05D003760 ORTHO05D004672 6.2e-19 97.4 76 65.8
FAN03G0469 Fragaria x ananassa HOM05D003760 ORTHO05D020255 6.2e-19 97.4 69 71.0
EL10Ac1g02286 Beta vulgaris HOM05D003760 ORTHO05D004672 8.2e-19 97.1 76 64.5
DCAR_022349 Daucus carota HOM05D003760 ORTHO05D004672 1.1e-18 96.7 77 67.5
HPP92_016595 Vanilla planifolia HOM05D003760 ORTHO05D004672 1.1e-18 96.7 76 67.1
Cfa010888 Carpinus fangiana HOM05D003760 ORTHO05D004672 1.4e-18 96.3 76 68.4
CiPaw.14G006600 Carya illinoinensis HOM05D003760 ORTHO05D004672 1.4e-18 96.3 76 65.8
Lj3g0013265 Lotus japonicus HOM05D003760 ORTHO05D004672 1.4e-18 96.3 76 68.4
SalBow5G2833 Salvia bowleyana HOM05D003760 ORTHO05D004672 1.4e-18 96.3 76 64.5
Actinidia19460 Actinidia chinensis HOM05D003760 ORTHO05D004672 1.8e-18 95.9 76 64.5
Lsat_1_v5_gn_5_36241 Lactuca sativa HOM05D003760 ORTHO05D004672 1.8e-18 95.9 76 60.5
Medtr5g031790 Medicago truncatula HOM05D003760 ORTHO05D004672 1.8e-18 95.9 76 67.1
Oeu015685.1 Olea europaea HOM05D003760 ORTHO05D004672 1.8e-18 95.9 76 64.5
PGR031G0954 Punica granatum HOM05D003760 ORTHO05D004672 1.8e-18 95.9 76 68.4
COL.COLO4_21460 Corchorus olitorius HOM05D003760 ORTHO05D004672 2.4e-18 95.5 76 64.5
Duzib114G0596 Durio zibethinus HOM05D003760 ORTHO05D004672 2.4e-18 95.5 76 64.5
Thhalv10007798m.g Eutrema salsugineum HOM05D003760 ORTHO05D004672 2.4e-18 95.5 76 65.8
Potri.010G068600 Populus trichocarpa HOM05D003760 ORTHO05D004672 2.4e-18 95.5 76 69.7
Sp3g06250 Schrenkiella parvula HOM05D003760 ORTHO05D004672 2.4e-18 95.5 76 65.8
AUR62042161 Chenopodium quinoa HOM05D003760 ORTHO05D004672 3.1e-18 95.1 71 67.6
BolC5t34655H Brassica oleracea HOM05D003760 ORTHO05D004672 4.0e-18 94.7 76 64.5
CARHR081950 Cardamine hirsuta HOM05D003760 ORTHO05D004672 4.0e-18 94.7 76 64.5
Gohir.D05G283000 Gossypium hirsutum HOM05D003760 ORTHO05D004672 4.0e-18 94.7 76 63.2
Gorai.009G296500 Gossypium raimondii HOM05D003760 ORTHO05D004672 4.0e-18 94.7 76 63.2
CAN.G476.4 Capsicum annuum HOM05D003760 ORTHO05D004672 5.3e-18 94.4 73 63.0
Cfa006289 Carpinus fangiana HOM05D003760 ORTHO05D004672 5.3e-18 94.4 76 67.1
Ciclev10001295m.g Citrus clementina HOM05D003760 ORTHO05D004672 5.3e-18 94.4 78 65.4
Hma1.2p1_1396F.1_g280580 Hydrangea macrophylla HOM05D003760 ORTHO05D004672 5.3e-18 94.4 76 63.2
SEGI_21043 Sequoiadendron giganteum HOM05D003760 ORTHO05D004672 5.3e-18 94.4 76 65.8
THA.LOC104818980 Tarenaya hassleriana HOM05D003760 ORTHO05D004672 5.3e-18 94.4 76 64.5
A05p40900 Brassica napus HOM05D003760 ORTHO05D004672 6.9e-18 94.0 76 64.5
BraA05t22819Z Brassica rapa HOM05D003760 ORTHO05D004672 6.9e-18 94.0 76 64.5
Haze_03069 Corylus avellana HOM05D003760 ORTHO05D004672 6.9e-18 94.0 76 67.1
Thecc.10G166200 Theobroma cacao HOM05D003760 ORTHO05D004672 6.9e-18 94.0 76 63.2
Aa31LG5G17870 Aethionema arabicum HOM05D003760 ORTHO05D004672 9.0e-18 93.6 76 64.5
AL3G18600 Arabidopsis lyrata HOM05D003760 ORTHO05D004672 9.0e-18 93.6 76 64.5
Gohir.A05G281000 Gossypium hirsutum HOM05D003760 ORTHO05D004672 9.0e-18 93.6 76 61.8
AT3G07300 Arabidopsis thaliana HOM05D003760 ORTHO05D004672 1.2e-17 93.2 76 64.5
MSTRG.16994 Avicennia marina HOM05D003760 ORTHO05D004672 1.2e-17 93.2 76 65.8
C05p60000 Brassica napus HOM05D003760 ORTHO05D004672 1.5e-17 92.8 76 61.8
BNapus_Darmor_BZH_scaffold_109p00130 Brassica napus HOM05D003760 ORTHO05D004672 2.0e-17 92.4 96 56.2
Carub.0003s0684 Capsella rubella HOM05D003760 ORTHO05D004672 2.0e-17 92.4 76 64.5
Zm00001eb223560 Zea mays HOM05D003760 ORTHO05D004672 2.0e-17 92.4 77 64.9
Hma1.2p1_0121F.1_g057510 Hydrangea macrophylla HOM05D003760 ORTHO05D004672 2.6e-17 92.0 76 60.5
Lsat_1_v5_gn_8_34020 Lactuca sativa HOM05D003760 ORTHO05D004672 2.6e-17 92.0 76 60.5
Sabra10G0038400 Salix brachista HOM05D003760 ORTHO05D004672 2.6e-17 92.0 76 67.1
CDE07G1968 Ceratophyllum demersum HOM05D003760 ORTHO05D004672 3.4e-17 91.7 76 63.2
Oeu035508.1 Olea europaea HOM05D003760 ORTHO05D020255 3.4e-17 91.7 70 67.1
SEGI_24692 Sequoiadendron giganteum HOM05D003760 ORTHO05D004672 3.4e-17 91.7 76 64.5
Glyma.11G154300 Glycine max HOM05D003760 ORTHO05D004672 7.6e-17 90.5 76 61.8
Phvul.005G029500 Phaseolus vulgaris HOM05D003760 ORTHO05D004672 7.6e-17 90.5 76 65.8
Solyc11g005600.2 Solanum lycopersicum HOM05D003760 ORTHO05D004672 7.6e-17 90.5 73 61.6
Sopen11g001570 Solanum pennellii HOM05D003760 ORTHO05D004672 7.6e-17 90.5 73 61.6
MD13G1218100 Malus domestica HOM05D003760 ORTHO05D020255 1.7e-16 89.4 72 69.4
Zm00001eb048720 Zea mays HOM05D003760 ORTHO05D004672 1.7e-16 89.4 77 62.3
COL.COLO4_15929 Corchorus olitorius HOM05D003760 ORTHO05D004672 2.9e-16 88.6 76 67.1
Prupe.1G044800 Prunus persica HOM05D003760 ORTHO05D004672 3.8e-16 88.2 77 64.9
unitig_578.g16298 Utricularia gibba HOM05D003760 ORTHO05D004672 4.9e-16 87.8 76 60.5
Ciclev10006759m.g Citrus clementina HOM05D003760 ORTHO05D004672 6.5e-16 87.4 71 63.4
Atru.chr4.1982 Acer truncatum HOM05D003760 ORTHO05D004672 1.4e-15 86.3 76 64.5
BcaB04g21296 Brassica carinata HOM05D003760 ORTHO05D004672 2.5e-15 85.5 77 62.3
CDE04G3266 Ceratophyllum demersum HOM05D000656 ORTHO05D000871 3.2e-15 85.1 101 50.5
RcHm_v2.0_Chr1g0322881 Rosa chinensis HOM05D003760 ORTHO05D004672 4.2e-15 84.7 68 66.2
ATR0075G007 Amborella trichopoda HOM05D003760 ORTHO05D004672 5.5e-15 84.3 76 56.6
Pp3c10_19890 Physcomitrium patens HOM05D003760 ORTHO05D004672 2.7e-14 82.0 76 53.9
SMO340G0195 Selaginella moellendorffii HOM05D003760 ORTHO05D004672 2.7e-14 82.0 76 52.6
Pp3c21_14090 Physcomitrium patens HOM05D003760 ORTHO05D004672 4.6e-14 81.3 76 52.6
RcHm_v2.0_Chr4g0394571 Rosa chinensis HOM05D003760 ORTHO05D004672 4.6e-14 81.3 76 63.2
AagrBONN_evm.TU.Sc2ySwM_344.807 Anthoceros agrestis HOM05D003760 ORTHO05D004672 6.0e-14 80.9 76 53.9
Mapoly0105s0017 Marchantia polymorpha HOM05D003760 ORTHO05D004672 6.0e-14 80.9 76 55.3
Cc03_g05880 Coffea canephora HOM05D003760 ORTHO05D020255 1.1e-12 76.6 95 50.5
MD02G1290200 Malus domestica HOM05D003760 ORTHO05D004672 3.3e-12 75.1 60 66.7
FvH4_4g04150 Fragaria vesca HOM05D003760 ORTHO05D004672 7.4e-12 73.9 76 60.5
FAN12G0242 Fragaria x ananassa HOM05D003760 ORTHO05D004672 7.4e-12 73.9 76 60.5
MD07G1036800 Malus domestica HOM05D003760 ORTHO05D004672 1.3e-11 73.2 58 65.5
FAN22G1391 Fragaria x ananassa HOM05D003760 ORTHO05D004672 1.6e-11 72.8 76 59.2
FAN17G2831 Fragaria x ananassa HOM05D003760 ORTHO05D004672 1.8e-10 69.3 76 56.6
TPR.G36778 Trifolium pratense HOM05D003760 ORTHO05D004672 1.7e-08 62.8 79 51.9
Psat6g019960 Pisum sativum HOM05D003760 ORTHO05D004672 1.4e-07 59.7 47 66.0


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