Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0026570 Camellia sinensis var. sinensis HOM05D006581 ORTHO05D007870 3.0e-134 481.9 244 100.0
Actinidia27421 Actinidia chinensis HOM05D006581 ORTHO05D007870 2.3e-102 375.9 224 84.4
Rhsim07G0097400 Rhododendron simsii HOM05D006581 ORTHO05D007870 3.4e-98 362.1 224 81.2
CSS0037330 Camellia sinensis var. sinensis HOM05D006581 ORTHO05D007870 1.1e-96 357.1 245 78.0
vmacro14025 Vaccinium macrocarpon HOM05D006581 ORTHO05D007870 7.4e-93 344.4 226 77.4
GSVIVG01019912001 Vitis vinifera HOM05D006581 ORTHO05D007870 1.8e-91 339.7 224 75.4
Cfa012052 Carpinus fangiana HOM05D006581 ORTHO05D007870 1.9e-88 329.7 224 73.7
Haze_09013 Corylus avellana HOM05D006581 ORTHO05D007870 5.5e-88 328.2 224 74.6
Nn3g19980 Nelumbo nucifera HOM05D006581 ORTHO05D007870 1.5e-85 320.1 224 71.4
QL12p015968 Quercus lobata HOM05D006581 ORTHO05D007870 2.5e-85 319.3 223 73.1
TAR629G0084 Trochodendron aralioides HOM05D006581 ORTHO05D007870 2.5e-85 319.3 225 73.3
Potri.008G016000 Populus trichocarpa HOM05D006581 ORTHO05D007870 4.3e-85 318.5 224 71.4
Prupe.1G071100 Prunus persica HOM05D006581 ORTHO05D007870 5.7e-85 318.2 224 72.8
Duzib128G1875 Durio zibethinus HOM05D006581 ORTHO05D007870 9.7e-85 317.4 224 73.7
Lj8A253T47 Lonicera japonica HOM05D006581 ORTHO05D007870 1.6e-84 316.6 224 72.3
CiPaw.08G049100 Carya illinoinensis HOM05D006581 ORTHO05D007870 8.2e-84 314.3 224 70.5
Peaxi162Scf00620g00237 Petunia axillaris HOM05D006581 ORTHO05D007870 1.1e-83 313.9 223 71.7
COL.COLO4_10009 Corchorus olitorius HOM05D006581 ORTHO05D007870 4.1e-83 312.0 224 73.2
MD15G1394600 Malus domestica HOM05D006581 ORTHO05D007870 9.0e-83 310.8 224 71.0
FAN07G0243 Fragaria x ananassa HOM05D006581 ORTHO05D007870 1.0e-81 307.4 224 70.1
DCAR_000885 Daucus carota HOM05D006581 ORTHO05D007870 1.3e-81 307.0 224 70.1
Thecc.10G119000 Theobroma cacao HOM05D006581 ORTHO05D007870 1.3e-81 307.0 224 71.9
Hma1.2p1_0017F.1_g011220 Hydrangea macrophylla HOM05D006581 ORTHO05D007870 1.7e-81 306.6 224 71.9
RcHm_v2.0_Chr4g0398711 Rosa chinensis HOM05D006581 ORTHO05D007870 1.7e-81 306.6 224 70.5
FAN12G3574 Fragaria x ananassa HOM05D006581 ORTHO05D007870 6.5e-81 304.7 224 69.6
Sabra08G0009700 Salix brachista HOM05D006581 ORTHO05D007870 6.5e-81 304.7 223 69.1
FvH4_4g06790 Fragaria vesca HOM05D006581 ORTHO05D007870 2.5e-80 302.8 224 69.2
Nitab4.5_0010186g0020 Nicotiana tabacum HOM05D006581 ORTHO05D007870 3.2e-80 302.4 225 69.8
PSO478G1557 Papaver somniferum HOM05D006581 ORTHO05D007870 1.2e-79 300.4 224 66.1
Atru.chr12.1085 Acer truncatum HOM05D006581 ORTHO05D007870 1.6e-79 300.1 217 70.0
Hund14684 Selenicereus undatus HOM05D006581 ORTHO05D007870 2.1e-79 299.7 224 69.2
PSO782G3179 Papaver somniferum HOM05D006581 ORTHO05D007870 6.1e-79 298.1 224 65.6
Nitab4.5_0005167g0030 Nicotiana tabacum HOM05D006581 ORTHO05D007870 1.8e-78 296.6 225 68.9
PGSC0003DMG400003942 Solanum tuberosum HOM05D006581 ORTHO05D007870 3.0e-78 295.8 225 68.9
Oeu001905.1 Olea europaea HOM05D006581 ORTHO05D007870 6.7e-78 294.7 196 74.5
Aqoxy7G00548 Aquilegia oxysepala HOM05D006581 ORTHO05D007870 8.8e-78 294.3 224 66.1
Ciclev10014277m.g Citrus clementina HOM05D006581 ORTHO05D007870 1.1e-77 293.9 217 69.1
Glyma.06G323200 Glycine max HOM05D006581 ORTHO05D007870 1.1e-77 293.9 224 66.1
MBI12_g26094_MAGBIO Magnolia biondii HOM05D006581 ORTHO05D007870 4.3e-77 292.0 200 71.0
Manes.10G064500 Manihot esculenta HOM05D006581 ORTHO05D007870 5.7e-77 291.6 198 74.2
Solyc08g079810.4 Solanum lycopersicum HOM05D006581 ORTHO05D007870 5.7e-77 291.6 225 68.0
CANSAT78G1168 Cannabis sativa HOM05D006581 ORTHO05D007870 7.4e-77 291.2 224 67.0
Ca_14132_v3 Cicer arietinum L. HOM05D006581 ORTHO05D007870 7.4e-77 291.2 224 66.1
Sopen08g028170 Solanum pennellii HOM05D006581 ORTHO05D007870 1.3e-76 290.4 225 68.0
EL10Ac5g12666 Beta vulgaris HOM05D006581 ORTHO05D007870 2.8e-76 289.3 225 64.9
Migut.E01071 Erythranthe guttata HOM05D006581 ORTHO05D007870 6.3e-76 288.1 224 67.4
Lalb_Chr01g0006991 Lupinus albus HOM05D006581 ORTHO05D007870 6.3e-76 288.1 225 68.0
Phvul.005G003000 Phaseolus vulgaris HOM05D006581 ORTHO05D007870 1.1e-75 287.3 224 65.6
HanXRQChr04g0124681 Helianthus annuus HOM05D006581 ORTHO05D007870 1.8e-75 286.6 224 69.6
Hma1.2p1_0138F.1_g062900 Hydrangea macrophylla HOM05D006581 ORTHO05D007870 1.8e-75 286.6 223 69.5
Lsat_1_v5_gn_8_138880 Lactuca sativa HOM05D006581 ORTHO05D007870 2.4e-75 286.2 190 76.3
Gohir.D06G178000 Gossypium hirsutum HOM05D006581 ORTHO05D007870 4.1e-75 285.4 197 75.6
Gorai.N007200 Gossypium raimondii HOM05D006581 ORTHO05D007870 5.3e-75 285.0 197 75.6
SGA_v2.0_scaffold196G40922 Striga asiatica HOM05D006581 ORTHO05D007870 5.3e-75 285.0 224 65.6
ECA233G4444 Erigeron canadensis HOM05D006581 ORTHO05D007870 2.6e-74 282.7 225 68.9
ClCG00G000120 Citrullus lanatus HOM05D006581 ORTHO05D007870 4.5e-74 282.0 224 66.1
ClCG00G004880 Citrullus lanatus HOM05D006581 ORTHO05D007870 4.5e-74 282.0 224 66.1
ClCG10G003370 Citrullus lanatus HOM05D006581 ORTHO05D007870 4.5e-74 282.0 224 66.1
Lj3g0012962 Lotus japonicus HOM05D006581 ORTHO05D007870 4.5e-74 282.0 224 65.6
Gohir.A06G170200 Gossypium hirsutum HOM05D006581 ORTHO05D007870 5.9e-74 281.6 197 75.1
Ah.02g116280 Amaranthus hybridus HOM05D006581 ORTHO05D007870 7.7e-74 281.2 207 66.7
Medtr3g010350 Medicago truncatula HOM05D006581 ORTHO05D007870 1.0e-73 280.8 224 64.7
Psat7g256920 Pisum sativum HOM05D006581 ORTHO05D007870 1.3e-73 280.4 224 64.7
TWI38G0425 Tripterygium wilfordii HOM05D006581 ORTHO05D007870 2.2e-73 279.6 197 69.5
Sed0002136 Sechium edule HOM05D006581 ORTHO05D007870 5.0e-73 278.5 196 70.4
Lj8C252T14 Lonicera japonica HOM05D006581 ORTHO05D007870 6.5e-73 278.1 201 71.1
TPR.G5149 Trifolium pratense HOM05D006581 ORTHO05D007870 2.5e-72 276.2 224 64.7
Eucgr.E00518 Eucalyptus grandis HOM05D006581 ORTHO05D007870 9.4e-72 274.2 190 71.6
Cc03_g06340 Coffea canephora HOM05D006581 ORTHO05D007870 1.6e-71 273.5 224 65.6
VMungo1080G1314 Vigna mungo HOM05D006581 ORTHO05D007870 1.6e-71 273.5 197 67.5
MELO3C014006.2 Cucumis melo HOM05D006581 ORTHO05D007870 1.4e-70 270.4 224 63.8
CsaV3_3G003400 Cucumis sativus L. HOM05D006581 ORTHO05D007870 1.8e-70 270.0 196 67.9
Ciclev10006485m.g Citrus clementina HOM05D006581 ORTHO05D007870 3.9e-70 268.9 217 63.6
arahy.Tifrunner.gnm1.ann1.J373DC Arachis hypogaea HOM05D006581 ORTHO05D007870 7.4e-69 264.6 224 61.6
arahy.Tifrunner.gnm1.ann1.MU0C19 Arachis hypogaea HOM05D006581 ORTHO05D007870 7.4e-69 264.6 224 61.6
Ciclev10017584m.g Citrus clementina HOM05D006581 ORTHO05D007870 1.7e-68 263.5 224 62.9
Cpa.g.sc33.130 Carica papaya HOM05D006581 ORTHO05D007870 2.8e-68 262.7 186 71.0
THA.LOC104812128 Tarenaya hassleriana HOM05D006581 ORTHO05D007870 4.5e-66 255.4 225 60.0
Migut.J01229 Erythranthe guttata HOM05D006581 ORTHO05D007870 2.9e-65 252.7 224 63.4
unitig_26.g9687 Utricularia gibba HOM05D006581 ORTHO05D007870 8.5e-65 251.1 216 57.9
Zm00001eb230550 Zea mays HOM05D006581 ORTHO05D007870 1.0e-62 244.2 225 56.0
BraA07t31529Z Brassica rapa HOM05D006581 ORTHO05D007870 1.5e-61 240.4 197 64.0
A07p39830 Brassica napus HOM05D006581 ORTHO05D007870 2.6e-61 239.6 199 64.8
SalBow7G1099 Salvia bowleyana HOM05D006581 ORTHO05D007870 3.7e-60 235.7 177 69.5
Thhalv10018136m.g Eutrema salsugineum HOM05D006581 ORTHO05D007870 6.3e-60 235.0 209 61.7
BolC6t39844H Brassica oleracea HOM05D006581 ORTHO05D007870 1.8e-59 233.4 188 66.5
C06p48090 Brassica napus HOM05D003462 ORTHO05D007870 3.1e-59 232.6 200 64.5
CDE05G1723 Ceratophyllum demersum HOM05D006581 ORTHO05D007870 2.0e-58 229.9 189 57.1
AL2G33810 Arabidopsis lyrata HOM05D006581 ORTHO05D007870 4.5e-58 228.8 199 61.3
AT1G73970 Arabidopsis thaliana HOM05D006581 ORTHO05D007870 5.9e-58 228.4 196 60.2
BcaC08g46826 Brassica carinata HOM05D006581 ORTHO05D007870 5.9e-58 228.4 200 64.0
Sp5g29170 Schrenkiella parvula HOM05D006581 ORTHO05D007870 7.7e-58 228.0 196 60.2
Carub.0002s2075 Capsella rubella HOM05D006581 ORTHO05D007870 5.0e-57 225.3 195 61.0
Aa31LG4G4270 Aethionema arabicum HOM05D006581 ORTHO05D007870 6.5e-57 224.9 227 58.6
CARHR067090 Cardamine hirsuta HOM05D006581 ORTHO05D007870 1.1e-56 224.2 202 60.4
SHI19174 Sapria himalayana HOM05D006581 ORTHO05D007870 4.2e-56 222.2 229 53.7
MBI12_g05899_MAGBIO Magnolia biondii HOM05D006581 ORTHO05D007870 3.0e-54 216.1 154 68.8
ATR0757G052 Amborella trichopoda HOM05D006581 ORTHO05D007870 6.7e-54 214.9 200 54.0
Ciclev10006576m.g Citrus clementina HOM05D006581 ORTHO05D007870 1.6e-50 203.8 217 53.5
AUR62004835 Chenopodium quinoa HOM05D006581 ORTHO05D007870 3.7e-44 182.6 132 65.9
AUR62040923 Chenopodium quinoa HOM05D006581 ORTHO05D007870 8.3e-44 181.4 132 65.2
SEGI_20261 Sequoiadendron giganteum HOM05D006581 ORTHO05D007870 5.4e-43 178.7 203 48.3
Pp3c5_4510 Physcomitrium patens HOM05D006581 ORTHO05D007870 2.9e-28 129.8 230 34.3
SMO118G0399 Selaginella moellendorffii HOM05D006581 ORTHO05D007870 8.3e-28 128.3 192 44.8
Mapoly0035s0119 Marchantia polymorpha HOM05D006581 ORTHO05D007870 1.4e-27 127.5 221 37.1
Lj8P252T34 Lonicera japonica HOM05D006581 ORTHO05D007870 3.0e-25 119.8 79 72.2
Medtr4g059740 Medicago truncatula HOM05D006581 ORTHO05D007870 1.4e-19 100.9 98 54.1
Dinv39047 Davidia involucrata HOM05D006581 ORTHO05D007870 2.3e-17 93.6 49 89.8
AagrBONN_evm.TU.Sc2ySwM_228.3501 Anthoceros agrestis HOM05D006581 ORTHO05D007870 7.3e-16 88.6 275 25.5


User provided reference genes

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