Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0026552 Camellia sinensis var. sinensis HOM05D000251 ORTHO05D111796 2.9e-47 191.4 89 100.0
CSS0029893 Camellia sinensis var. sinensis HOM05D000251 ORTHO05D005532 5.5e-22 107.5 87 64.4
CSS0012661 Camellia sinensis var. sinensis HOM05D000251 ORTHO05D005532 3.0e-20 101.7 87 60.9
CSS0002479 Camellia sinensis var. sinensis HOM05D000251 ORTHO05D005532 5.7e-19 97.4 87 59.8
CSS0008158 Camellia sinensis var. sinensis HOM05D000251 ORTHO05D005532 2.4e-17 92.0 81 59.3
CSS0009145 Camellia sinensis var. sinensis HOM05D000251 ORTHO05D005532 2.4e-17 92.0 81 59.3
CSS0032362 Camellia sinensis var. sinensis HOM05D000251 ORTHO05D111740 2.3e-15 85.5 87 55.2
CSS0021916 Camellia sinensis var. sinensis HOM05D000251 ORTHO05D005532 1.2e-13 79.7 81 53.1
Atru.chr6.2947 Acer truncatum HOM05D000251 ORTHO05D005532 2.0e-11 72.4 39 87.2
Atru.chr6.2885 Acer truncatum HOM05D000251 ORTHO05D005532 3.4e-11 71.6 41 82.9
MSTRG.25929 Avicennia marina HOM05D000251 ORTHO05D005532 3.4e-11 71.6 41 82.9
Cpa.g.sc83.76 Carica papaya HOM05D000251 ORTHO05D005532 3.4e-11 71.6 41 82.9
Ciclev10014095m.g Citrus clementina HOM05D000251 ORTHO05D005532 3.4e-11 71.6 41 82.9
COL.COLO4_05022 Corchorus olitorius HOM05D000251 ORTHO05D005532 3.4e-11 71.6 41 82.9
Dinv04805 Davidia involucrata HOM05D000251 ORTHO05D005532 3.4e-11 71.6 41 82.9
Duzib132G0720 Durio zibethinus HOM05D000251 ORTHO05D005532 3.4e-11 71.6 41 82.9
Migut.A00166 Erythranthe guttata HOM05D000251 ORTHO05D005532 3.4e-11 71.6 41 82.9
Gohir.A12G139000 Gossypium hirsutum HOM05D000251 ORTHO05D005532 3.4e-11 71.6 41 82.9
Gohir.D12G143400 Gossypium hirsutum HOM05D000251 ORTHO05D005532 3.4e-11 71.6 41 82.9
Gorai.008G154700 Gossypium raimondii HOM05D000251 ORTHO05D005532 3.4e-11 71.6 41 82.9
Lj8C560G4 Lonicera japonica HOM05D000251 ORTHO05D005532 3.4e-11 71.6 41 82.9
Oeu053660.3 Olea europaea HOM05D000251 ORTHO05D005532 3.4e-11 71.6 41 82.9
Peaxi162Scf00495g00121 Petunia axillaris HOM05D000251 ORTHO05D005532 3.4e-11 71.6 41 82.9
Thecc.02G183800 Theobroma cacao HOM05D000251 ORTHO05D005532 3.4e-11 71.6 41 82.9
Ah.16g106630 Amaranthus hybridus HOM05D000251 ORTHO05D005532 4.4e-11 71.2 41 82.9
Sabra17G0010900 Salix brachista HOM05D000251 ORTHO05D005532 4.4e-11 71.2 43 83.7
Actinidia11011 Actinidia chinensis HOM05D000251 ORTHO05D005532 5.7e-11 70.9 41 82.9
Actinidia30461 Actinidia chinensis HOM05D000251 ORTHO05D005532 5.7e-11 70.9 41 80.5
Ca_09441_v3 Cicer arietinum L. HOM05D000251 ORTHO05D005532 5.7e-11 70.9 39 82.1
MD09G1243400 Malus domestica HOM05D000251 ORTHO05D005532 5.7e-11 70.9 39 84.6
MD17G1235400 Malus domestica HOM05D000251 ORTHO05D005532 5.7e-11 70.9 39 84.6
Medtr2g090610 Medicago truncatula HOM05D000251 ORTHO05D005532 5.7e-11 70.9 39 82.1
Psat6g048960 Pisum sativum HOM05D000251 ORTHO05D005532 5.7e-11 70.9 39 82.1
Aqoxy4G02325 Aquilegia oxysepala HOM05D000251 ORTHO05D005532 7.5e-11 70.5 41 80.5
Dinv06874 Davidia involucrata HOM05D000251 ORTHO05D005532 7.5e-11 70.5 41 80.5
CAN.G61.27 Capsicum annuum HOM05D000251 ORTHO05D005532 9.8e-11 70.1 41 80.5
Nitab4.5_0000159g0190 Nicotiana tabacum HOM05D000251 ORTHO05D005532 9.8e-11 70.1 41 80.5
Nitab4.5_0006666g0010 Nicotiana tabacum HOM05D000251 ORTHO05D005532 9.8e-11 70.1 41 80.5
PSO541G3054 Papaver somniferum HOM05D000251 ORTHO05D005532 9.8e-11 70.1 41 80.5
PSO675G3162 Papaver somniferum HOM05D000251 ORTHO05D005532 9.8e-11 70.1 41 80.5
Solyc11g017170.1 Solanum lycopersicum HOM05D000251 ORTHO05D005532 9.8e-11 70.1 41 80.5
Sopen11g009100 Solanum pennellii HOM05D000251 ORTHO05D005532 9.8e-11 70.1 41 80.5
PGSC0003DMG400009218 Solanum tuberosum HOM05D000251 ORTHO05D005532 9.8e-11 70.1 41 80.5
FvH4_5g29681 Fragaria vesca HOM05D000251 ORTHO05D005532 1.3e-10 69.7 39 82.1
FAN04G0170 Fragaria x ananassa HOM05D000251 ORTHO05D005532 1.3e-10 69.7 39 82.1
FAN08G1506 Fragaria x ananassa HOM05D000251 ORTHO05D005532 1.3e-10 69.7 39 82.1
Manes.13G143600 Manihot esculenta HOM05D000251 ORTHO05D005532 1.3e-10 69.7 41 80.5
RcHm_v2.0_Chr7g0223111 Rosa chinensis HOM05D000251 ORTHO05D005532 1.3e-10 69.7 39 82.1
SalBow7G3451 Salvia bowleyana HOM05D000251 ORTHO05D005532 1.3e-10 69.7 41 80.5
CSS0015858 Camellia sinensis var. sinensis HOM05D000251 ORTHO05D005532 1.7e-10 69.3 41 80.5
CiPaw.04G127700 Carya illinoinensis HOM05D000251 ORTHO05D005532 1.7e-10 69.3 41 80.5
ECA240G1856 Erigeron canadensis HOM05D000251 ORTHO05D005532 1.7e-10 69.3 41 80.5
Lsat_1_v5_gn_5_44941 Lactuca sativa HOM05D000251 ORTHO05D005532 1.7e-10 69.3 41 80.5
Lalb_Chr14g0367081 Lupinus albus HOM05D000251 ORTHO05D005532 1.7e-10 69.3 39 82.1
Potri.017G013500 Populus trichocarpa HOM05D000251 ORTHO05D005532 1.7e-10 69.3 39 84.6
QL08p039799 Quercus lobata HOM05D000251 ORTHO05D005532 1.7e-10 69.3 41 80.5
GSVIVG01020583001 Vitis vinifera HOM05D000251 ORTHO05D005532 1.7e-10 69.3 39 79.5
CANSAT64G2637 Cannabis sativa HOM05D000251 ORTHO05D005532 2.2e-10 68.9 39 82.1
HanXRQChr03g0078711 Helianthus annuus HOM05D000251 ORTHO05D005532 2.2e-10 68.9 41 80.5
Lj3g0007891 Lotus japonicus HOM05D000251 ORTHO05D005532 2.2e-10 68.9 39 79.5
Phvul.005G101400 Phaseolus vulgaris HOM05D000251 ORTHO05D005532 2.2e-10 68.9 39 82.1
Rhsim04G0070600 Rhododendron simsii HOM05D000251 ORTHO05D005532 2.2e-10 68.9 39 79.5
TPR.G6498 Trifolium pratense HOM05D000251 ORTHO05D005532 2.2e-10 68.9 39 79.5
Glyma.12G205800 Glycine max HOM05D000251 ORTHO05D005532 2.8e-10 68.6 39 79.5
Glyma.13G295100 Glycine max HOM05D000251 ORTHO05D005532 2.8e-10 68.6 39 79.5
Prupe.3G133300 Prunus persica HOM05D000251 ORTHO05D005532 2.8e-10 68.6 39 82.1
TAR627G0503 Trochodendron aralioides HOM05D000251 ORTHO05D005532 2.8e-10 68.6 41 78.0
VMungo1080G0767 Vigna mungo HOM05D000251 ORTHO05D005532 2.8e-10 68.6 39 79.5
DCAR_000770 Daucus carota HOM05D000251 ORTHO05D005532 3.7e-10 68.2 39 79.5
ClCG07G002540 Citrullus lanatus HOM05D000251 ORTHO05D005532 4.9e-10 67.8 41 78.0
MELO3C018710.2 Cucumis melo HOM05D000251 ORTHO05D005532 4.9e-10 67.8 41 78.0
CsaV3_7G005820 Cucumis sativus L. HOM05D000251 ORTHO05D005532 4.9e-10 67.8 41 78.0
Sed0000387 Sechium edule HOM05D000251 ORTHO05D005532 4.9e-10 67.8 41 78.0
Sed0009923 Sechium edule HOM05D000251 ORTHO05D005532 4.9e-10 67.8 41 78.0
Sc12g0003170 Simmondsia chinensis HOM05D000251 ORTHO05D005532 4.9e-10 67.8 41 78.0
Lalb_Chr24g0399971 Lupinus albus HOM05D000251 ORTHO05D005532 6.3e-10 67.4 39 79.5
MBI15_g37780_MAGBIO Magnolia biondii HOM05D000251 ORTHO05D005532 6.3e-10 67.4 41 78.0
Nn7g36698 Nelumbo nucifera HOM05D000251 ORTHO05D005532 6.3e-10 67.4 39 76.9
vmacro09254 Vaccinium macrocarpon HOM05D000251 ORTHO05D005532 6.3e-10 67.4 41 70.7
Cfa004459 Carpinus fangiana HOM05D000251 ORTHO05D005532 8.3e-10 67.0 41 78.0
Haze_13211 Corylus avellana HOM05D000251 ORTHO05D005532 8.3e-10 67.0 41 78.0
Haze_13212 Corylus avellana HOM05D000251 ORTHO05D005532 8.3e-10 67.0 41 78.0
arahy.Tifrunner.gnm1.ann1.28NLID Arachis hypogaea HOM05D000251 ORTHO05D005532 1.1e-09 66.6 39 76.9
PGR142G3105 Punica granatum HOM05D000251 ORTHO05D005532 1.1e-09 66.6 41 78.0
DCAR_004456 Daucus carota HOM05D000251 ORTHO05D005532 1.4e-09 66.2 41 75.6
BcaB07g30538 Brassica carinata HOM05D000251 ORTHO05D005532 1.8e-09 65.9 39 76.9
CiPaw.03G180300 Carya illinoinensis HOM05D000251 ORTHO05D005532 1.8e-09 65.9 39 79.5
AUR62032107 Chenopodium quinoa HOM05D000251 ORTHO05D005532 1.8e-09 65.9 41 78.0
AUR62042419 Chenopodium quinoa HOM05D000251 ORTHO05D005532 1.8e-09 65.9 41 78.0
Aa31LG5G3020 Aethionema arabicum HOM05D000251 ORTHO05D005532 3.1e-09 65.1 39 76.9
AT5G44240 Arabidopsis thaliana HOM05D000251 ORTHO05D005532 3.1e-09 65.1 39 76.9
EL10Ac2g03351 Beta vulgaris HOM05D000251 ORTHO05D005532 3.1e-09 65.1 39 79.5
BcaC06g34580 Brassica carinata HOM05D000251 ORTHO05D005532 3.1e-09 65.1 39 76.9
A06p47370 Brassica napus HOM05D000251 ORTHO05D005532 3.1e-09 65.1 39 76.9
BolC7t43218H Brassica oleracea HOM05D000251 ORTHO05D005532 3.1e-09 65.1 39 76.9
BraA06t27607Z Brassica rapa HOM05D000251 ORTHO05D005532 3.1e-09 65.1 39 76.9
CARHR178990 Cardamine hirsuta HOM05D000251 ORTHO05D005532 3.1e-09 65.1 39 76.9
Eucgr.K01048 Eucalyptus grandis HOM05D000251 ORTHO05D005532 3.1e-09 65.1 41 75.6
Sp2g09050 Schrenkiella parvula HOM05D000251 ORTHO05D005532 3.1e-09 65.1 39 76.9
unitig_32.g11477 Utricularia gibba HOM05D000251 ORTHO05D005532 3.1e-09 65.1 41 70.7
AL8G15780 Arabidopsis lyrata HOM05D000251 ORTHO05D005532 7.0e-09 63.9 39 76.9
BcaC03g16645 Brassica carinata HOM05D000251 ORTHO05D005532 7.0e-09 63.9 39 74.4
C02p44780 Brassica napus HOM05D000251 ORTHO05D005532 7.0e-09 63.9 39 74.4
C07p26900 Brassica napus HOM05D000251 ORTHO05D005532 7.0e-09 63.9 39 74.4
BolC2t10522H Brassica oleracea HOM05D000251 ORTHO05D005532 7.0e-09 63.9 39 74.4
Carub.0008s0428 Capsella rubella HOM05D000251 ORTHO05D005532 7.0e-09 63.9 39 76.9
Thhalv10003135m.g Eutrema salsugineum HOM05D000251 ORTHO05D005532 7.0e-09 63.9 39 74.4
HPP92_008210 Vanilla planifolia HOM05D000251 ORTHO05D005532 7.0e-09 63.9 41 73.2
ATR0697G110 Amborella trichopoda HOM05D000251 ORTHO05D005532 9.2e-09 63.5 41 68.3
THA.LOC104826038 Tarenaya hassleriana HOM05D000251 ORTHO05D005532 1.6e-08 62.8 39 74.4
Zm00001eb326010 Zea mays HOM05D000251 ORTHO05D005532 1.3e-07 59.7 41 65.9
Os11g0446500 Oryza sativa ssp. japonica HOM05D000251 ORTHO05D005532 1.7e-07 59.3 41 68.3
CDE11G0168 Ceratophyllum demersum HOM05D000251 ORTHO05D005532 2.3e-07 58.9 41 65.9
SMO116G0312 Selaginella moellendorffii HOM05D000251 ORTHO05D005532 2.9e-07 58.5 41 65.9
SHI10378 Sapria himalayana HOM05D000251 ORTHO05D000014 3.9e-07 58.2 41 68.3
Mapoly0005s0144 Marchantia polymorpha HOM05D000251 ORTHO05D005532 5.0e-07 57.8 41 65.9
Pp3c6_12690 Physcomitrium patens HOM05D000251 ORTHO05D005532 5.0e-07 57.8 41 63.4
Zm00001eb420520 Zea mays HOM05D000251 ORTHO05D005532 1.9e-06 55.8 39 61.5
AagrBONN_evm.TU.Sc2ySwM_117.621 Anthoceros agrestis HOM05D000251 ORTHO05D005532 9.5e-06 53.5 39 61.5


User provided reference genes

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