Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0026540 Camellia sinensis var. sinensis HOM05D004010 ORTHO05D004995 9.0e-201 703.4 352 100.0
CSS0006564 Camellia sinensis var. sinensis HOM05D004010 ORTHO05D004995 1.5e-184 649.4 352 92.9
CSS0029677 Camellia sinensis var. sinensis HOM05D004010 ORTHO05D004995 2.6e-184 648.7 352 92.9
vmacro05856 Vaccinium macrocarpon HOM05D004010 ORTHO05D004995 8.9e-140 500.7 352 71.6
Dinv33448 Davidia involucrata HOM05D004010 ORTHO05D004995 1.5e-139 500.0 352 73.0
Rhsim10G0018100 Rhododendron simsii HOM05D004010 ORTHO05D004995 8.3e-138 494.2 352 71.9
vmacro05456 Vaccinium macrocarpon HOM05D004010 ORTHO05D004995 8.1e-125 451.1 352 66.2
Lju41A39T81 Lonicera japonica HOM05D004010 ORTHO05D004995 7.1e-121 438.0 353 63.5
Cfa007379 Carpinus fangiana HOM05D004010 ORTHO05D004995 1.1e-118 430.6 350 64.6
Haze_14730 Corylus avellana HOM05D004010 ORTHO05D004995 2.5e-118 429.5 350 64.0
TAR371G0622 Trochodendron aralioides HOM05D004010 ORTHO05D004995 3.6e-117 425.6 354 63.0
QL02p075066 Quercus lobata HOM05D004010 ORTHO05D004995 7.1e-113 411.4 351 62.4
Manes.17G113000 Manihot esculenta HOM05D004010 ORTHO05D004995 3.5e-112 409.1 352 58.8
CiPaw.03G042500 Carya illinoinensis HOM05D004010 ORTHO05D004995 7.8e-112 407.9 351 60.7
Potri.001G346000 Populus trichocarpa HOM05D004010 ORTHO05D004995 3.0e-111 406.0 354 58.5
Sopen02g031220 Solanum pennellii HOM05D004010 ORTHO05D004995 1.1e-110 404.1 352 57.7
Solyc02g086500.3 Solanum lycopersicum HOM05D004010 ORTHO05D004995 3.3e-110 402.5 352 58.0
PGSC0003DMG400012627 Solanum tuberosum HOM05D004010 ORTHO05D004995 4.3e-110 402.1 352 57.7
MD09G1028200 Malus domestica HOM05D004010 ORTHO05D004995 1.6e-109 400.2 353 59.5
Prupe.3G290300 Prunus persica HOM05D004010 ORTHO05D004995 1.6e-109 400.2 350 60.0
RcHm_v2.0_Chr2g0173001 Rosa chinensis HOM05D004010 ORTHO05D004995 1.6e-109 400.2 351 57.8
MD17G1029800 Malus domestica HOM05D004010 ORTHO05D004995 8.1e-109 397.9 353 59.5
Sabra16G0225000 Salix brachista HOM05D004010 ORTHO05D004995 5.3e-108 395.2 354 58.8
Sabra16G0225700 Salix brachista HOM05D004010 ORTHO05D004995 5.3e-108 395.2 354 58.8
Ciclev10014033m.g Citrus clementina HOM05D004010 ORTHO05D004995 2.0e-107 393.3 354 59.9
FAN09G4321 Fragaria x ananassa HOM05D004010 ORTHO05D004995 7.9e-104 381.3 351 55.8
Nitab4.5_0006802g0030 Nicotiana tabacum HOM05D004010 ORTHO05D004995 7.9e-104 381.3 352 56.0
Thecc.04G015900 Theobroma cacao HOM05D004010 ORTHO05D004995 7.9e-104 381.3 354 58.2
CAN.G473.4 Capsicum annuum HOM05D004010 ORTHO05D004995 1.0e-103 380.9 352 53.7
Nitab4.5_0002682g0110 Nicotiana tabacum HOM05D004010 ORTHO05D004995 6.6e-103 378.3 352 55.1
FvH4_6g51330 Fragaria vesca HOM05D004010 ORTHO05D004995 3.3e-102 375.9 351 55.3
FAN05G5546 Fragaria x ananassa HOM05D004010 ORTHO05D004995 4.3e-102 375.6 351 55.3
FAN14G1482 Fragaria x ananassa HOM05D004010 ORTHO05D004995 4.3e-102 375.6 351 55.0
MBI10_g32033_MAGBIO Magnolia biondii HOM05D004010 ORTHO05D004995 6.2e-101 371.7 351 56.4
Glyma.19G004700 Glycine max HOM05D004010 ORTHO05D004995 1.4e-100 370.5 349 57.9
Gorai.006G032700 Gossypium raimondii HOM05D004010 ORTHO05D004995 1.8e-100 370.2 352 54.5
Gohir.D09G028100 Gossypium hirsutum HOM05D004010 ORTHO05D004995 3.1e-100 369.4 352 54.5
Peaxi162Scf00129g01535 Petunia axillaris HOM05D004010 ORTHO05D004995 5.3e-100 368.6 353 54.7
arahy.Tifrunner.gnm1.ann1.TK4K1F Arachis hypogaea HOM05D004010 ORTHO05D004995 2.2e-98 363.2 353 55.5
Ca_04154_v3 Cicer arietinum L. HOM05D004010 ORTHO05D004995 2.2e-98 363.2 352 54.0
Nn4g22648 Nelumbo nucifera HOM05D004010 ORTHO05D004995 4.9e-98 362.1 355 55.2
VMungo0464G1595 Vigna mungo HOM05D004010 ORTHO05D004995 6.4e-98 361.7 352 56.5
Phvul.004G009161 Phaseolus vulgaris HOM05D004010 ORTHO05D004995 8.4e-98 361.3 352 56.5
Phvul.004G009761 Phaseolus vulgaris HOM05D004010 ORTHO05D004995 1.4e-97 360.5 352 56.5
PGR142G3424 Punica granatum HOM05D004010 ORTHO05D004995 1.9e-97 360.1 352 54.8
Lalb_Chr24g0397171 Lupinus albus HOM05D004010 ORTHO05D004995 4.2e-97 359.0 352 54.5
Phvul.004G009109 Phaseolus vulgaris HOM05D004010 ORTHO05D004995 4.2e-97 359.0 352 56.2
Phvul.004G009818 Phaseolus vulgaris HOM05D004010 ORTHO05D004995 7.1e-97 358.2 352 55.7
TWI36G0979 Tripterygium wilfordii HOM05D004010 ORTHO05D004995 1.6e-96 357.1 355 54.4
Lj2g0015656 Lotus japonicus HOM05D004010 ORTHO05D004995 2.1e-96 356.7 352 55.1
CANSAT64G1980 Cannabis sativa HOM05D004010 ORTHO05D004995 3.5e-96 355.9 354 53.7
TPR.G14085 Trifolium pratense HOM05D004010 ORTHO05D004995 4.6e-96 355.5 351 54.1
Sc03g0007550 Simmondsia chinensis HOM05D004010 ORTHO05D004995 7.9e-96 354.8 352 55.7
DCAR_001437 Daucus carota HOM05D004010 ORTHO05D004995 1.8e-95 353.6 354 52.8
Sed0022234 Sechium edule HOM05D004010 ORTHO05D004995 1.9e-94 350.1 355 51.8
ECA232G4079 Erigeron canadensis HOM05D004010 ORTHO05D004995 2.5e-94 349.7 352 52.6
Actinidia15573 Actinidia chinensis HOM05D004010 ORTHO05D004995 3.3e-94 349.4 258 69.8
Migut.H00083 Erythranthe guttata HOM05D004010 ORTHO05D004995 7.4e-94 348.2 351 53.8
Lsat_1_v5_gn_4_183480 Lactuca sativa HOM05D004010 ORTHO05D004995 7.4e-94 348.2 350 52.9
arahy.Tifrunner.gnm1.ann1.8M6LVM Arachis hypogaea HOM05D004010 ORTHO05D004995 9.6e-94 347.8 353 53.5
Aqoxy3G01154 Aquilegia oxysepala HOM05D004010 ORTHO05D004995 2.8e-93 346.3 352 54.0
Oeu006813.1 Olea europaea HOM05D004010 ORTHO05D004995 3.7e-93 345.9 349 53.3
Medtr6g005010 Medicago truncatula HOM05D004010 ORTHO05D004995 6.2e-93 345.1 353 52.7
Phvul.004G009536 Phaseolus vulgaris HOM05D004010 ORTHO05D004995 8.1e-93 344.7 359 54.3
HanXRQChr09g0255111 Helianthus annuus HOM05D004010 ORTHO05D004995 1.2e-91 340.9 349 51.6
Eucgr.I01751 Eucalyptus grandis HOM05D004010 ORTHO05D004995 1.5e-91 340.5 350 52.9
PSO478G2834 Papaver somniferum HOM05D004010 ORTHO05D004995 2.0e-91 340.1 356 53.4
Psat1g055320 Pisum sativum HOM05D004010 ORTHO05D004995 2.0e-91 340.1 348 52.9
THA.LOC104825324 Tarenaya hassleriana HOM05D004010 ORTHO05D004995 3.2e-89 332.8 353 48.4
PSO017G0470 Papaver somniferum HOM05D004010 ORTHO05D004995 4.2e-89 332.4 356 52.0
CsaV3_3G042730 Cucumis sativus L. HOM05D004010 ORTHO05D004995 3.9e-87 325.9 350 49.4
MELO3C009985.2 Cucumis melo HOM05D004010 ORTHO05D004995 3.7e-85 319.3 351 49.3
ClCG10G013960 Citrullus lanatus HOM05D004010 ORTHO05D004995 1.8e-84 317.0 351 49.0
SalBow6G2090 Salvia bowleyana HOM05D004010 ORTHO05D004995 3.4e-83 312.8 350 48.9
Actinidia36109 Actinidia chinensis HOM05D004010 ORTHO05D004995 1.7e-82 310.5 213 74.2
BcaC06g30965 Brassica carinata HOM05D004010 ORTHO05D004995 3.8e-82 309.3 352 46.9
Thhalv10003508m.g Eutrema salsugineum HOM05D004010 ORTHO05D004995 3.8e-82 309.3 344 46.5
Aa31LG2G5000 Aethionema arabicum HOM05D004010 ORTHO05D004995 8.4e-82 308.1 354 46.6
A06p40990 Brassica napus HOM05D004010 ORTHO05D004995 1.1e-81 307.8 352 44.9
BraA06t27018Z Brassica rapa HOM05D004010 ORTHO05D004995 1.1e-81 307.8 352 44.9
BcaC06g33789 Brassica carinata HOM05D004010 ORTHO05D004995 3.2e-81 306.2 352 45.5
C07p36860 Brassica napus HOM05D004010 ORTHO05D004995 3.2e-81 306.2 352 45.5
BolC7t44198H Brassica oleracea HOM05D004010 ORTHO05D004995 3.2e-81 306.2 352 45.5
Hund06718 Selenicereus undatus HOM05D004010 ORTHO05D004995 9.3e-81 304.7 351 47.6
AL5G17090 Arabidopsis lyrata HOM05D004010 ORTHO05D004995 2.7e-80 303.1 353 46.2
AT3G27670 Arabidopsis thaliana HOM05D004010 ORTHO05D004995 4.6e-80 302.4 353 45.9
Carub.0005s0611 Capsella rubella HOM05D004010 ORTHO05D004995 3.0e-79 299.7 353 45.0
Sp2g16800 Schrenkiella parvula HOM05D004010 ORTHO05D004995 3.9e-79 299.3 343 45.2
ATR1158G023 Amborella trichopoda HOM05D004010 ORTHO05D004995 1.8e-76 290.4 354 46.9
SGA_v2.0_scaffold135G34899 Striga asiatica HOM05D004010 ORTHO05D004995 9.0e-76 288.1 350 46.3
CDE05G1248 Ceratophyllum demersum HOM05D004010 ORTHO05D004995 1.0e-74 284.6 351 43.3
Cc07_g01800 Coffea canephora HOM05D004010 ORTHO05D004995 3.2e-73 279.6 276 53.6
Sopen00g011090 Solanum pennellii HOM05D004010 ORTHO05D004995 4.2e-73 279.3 253 55.3
AUR62043055 Chenopodium quinoa HOM05D004010 ORTHO05D004995 3.0e-63 246.5 353 40.8
Zm00001eb123050 Zea mays HOM05D004010 ORTHO05D004995 2.0e-62 243.8 346 40.2
Os01g0169500 Oryza sativa ssp. japonica HOM05D004010 ORTHO05D004995 1.3e-61 241.1 347 40.3
EL10Ac4g08587 Beta vulgaris HOM05D004010 ORTHO05D004995 8.2e-61 238.4 306 42.5
Cpa.g.sc108.58 Carica papaya HOM05D004010 ORTHO05D004995 1.1e-49 201.4 351 37.3
Atru.chr6.2370 Acer truncatum HOM05D004010 ORTHO05D004995 2.2e-42 177.2 165 55.2
Atru.chr6.2371 Acer truncatum HOM05D004010 ORTHO05D004995 6.1e-40 169.1 162 53.7
AUR62034752 Chenopodium quinoa HOM05D004010 ORTHO05D004995 8.8e-39 165.2 352 33.2
Phvul.007G112678 Phaseolus vulgaris HOM05D004010 ORTHO05D004995 4.3e-33 146.4 147 55.8
Actinidia36110 Actinidia chinensis HOM05D004010 ORTHO05D004995 5.6e-33 146.0 112 65.2
SMO361G0448 Selaginella moellendorffii HOM05D004010 ORTHO05D004995 4.7e-24 116.3 339 27.4
GSVIVG01032418001 Vitis vinifera HOM05D004010 ORTHO05D004995 2.4e-20 104.0 113 51.3
COL.COLO4_29096 Corchorus olitorius HOM05D004010 ORTHO05D004995 4.1e-20 103.2 101 49.5
Phvul.007G113156 Phaseolus vulgaris HOM05D004010 ORTHO05D004995 2.1e-16 90.9 96 55.2
Mapoly0001s0420 Marchantia polymorpha HOM05D004010 ORTHO05D004995 4.7e-16 89.7 379 23.5
RcHm_v2.0_Chr4g0387881 Rosa chinensis HOM05D004010 ORTHO05D343204 1.2e-14 85.1 106 45.3
CBR_g19445 Chara braunii HOM05D004010 ORTHO05D004995 3.7e-13 80.1 274 22.6
RcHm_v2.0_Chr3g0488481 Rosa chinensis HOM05D004010 ORTHO05D004995 1.6e-11 74.7 108 41.7
RcHm_v2.0_Chr5g0081041 Rosa chinensis HOM05D004010 ORTHO05D004995 1.3e-10 71.6 108 39.8
FAN06G2394 Fragaria x ananassa HOM05D000021 ORTHO05D000010 3.4e-06 57.0 106 34.0


User provided reference genes

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