Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0026527 Camellia sinensis var. sinensis HOM05D004940 ORTHO05D018819 1.3e-47 192.6 87 100.0
CSS0008401 Camellia sinensis var. sinensis HOM05D004940 ORTHO05D018819 9.5e-43 176.4 87 92.0
CSS0049470 Camellia sinensis var. sinensis HOM05D004940 ORTHO05D018819 1.4e-41 172.6 87 90.8
CSS0033490 Camellia sinensis var. sinensis HOM05D004940 ORTHO05D018819 5.2e-41 170.6 87 90.8
CSS0024627 Camellia sinensis var. sinensis HOM05D004940 ORTHO05D018819 1.4e-38 162.5 79 93.7
CSS0048666 Camellia sinensis var. sinensis HOM05D004940 ORTHO05D018819 1.4e-38 162.5 79 93.7
CSS0034361 Camellia sinensis var. sinensis HOM05D004940 ORTHO05D018819 1.2e-26 122.9 58 96.6
CSS0021031 Camellia sinensis var. sinensis HOM05D004940 ORTHO05D007805 1.2e-24 116.3 78 71.8
Actinidia37536 Actinidia chinensis HOM05D004940 ORTHO05D007805 1.1e-22 109.8 78 67.9
Dinv16378 Davidia involucrata HOM05D004940 ORTHO05D007805 1.1e-22 109.8 78 66.7
Lj1C79T2 Lonicera japonica HOM05D004940 ORTHO05D007805 2.4e-22 108.6 57 86.0
Duzib138G0347 Durio zibethinus HOM05D004940 ORTHO05D007805 3.2e-22 108.2 78 64.1
Lj1C71G15 Lonicera japonica HOM05D004940 ORTHO05D007805 3.2e-22 108.2 58 82.8
COL.COLO4_36581 Corchorus olitorius HOM05D004940 ORTHO05D007805 4.1e-22 107.8 57 78.9
vmacro02697 Vaccinium macrocarpon HOM05D004940 ORTHO05D007805 4.1e-22 107.8 78 62.8
Prupe.8G218700 Prunus persica HOM05D004940 ORTHO05D007805 7.1e-22 107.1 80 61.2
Duzib133G0552 Durio zibethinus HOM05D004940 ORTHO05D007805 9.2e-22 106.7 56 82.1
Lj1g0003710 Lotus japonicus HOM05D004940 ORTHO05D007805 1.2e-21 106.3 78 62.8
Glyma.19G166800 Glycine max HOM05D004940 ORTHO05D007805 1.6e-21 105.9 78 62.8
Lj1A78G31 Lonicera japonica HOM05D004940 ORTHO05D007805 1.6e-21 105.9 56 85.7
Rhsim13G0038600 Rhododendron simsii HOM05D004940 ORTHO05D007805 2.1e-21 105.5 56 80.4
Thecc.01G253300 Theobroma cacao HOM05D004940 ORTHO05D007805 2.7e-21 105.1 56 80.4
TWI12G0664 Tripterygium wilfordii HOM05D004940 ORTHO05D007805 2.7e-21 105.1 78 62.8
TWI75G1829 Tripterygium wilfordii HOM05D004940 ORTHO05D007805 2.7e-21 105.1 78 61.5
Cc01_g18010 Coffea canephora HOM05D004940 ORTHO05D007805 3.5e-21 104.8 78 62.8
MSTRG.18341 Avicennia marina HOM05D004940 ORTHO05D007805 4.6e-21 104.4 78 64.1
Psat3g055720 Pisum sativum HOM05D004940 ORTHO05D007805 4.6e-21 104.4 78 62.8
SalBow4G0784 Salvia bowleyana HOM05D004940 ORTHO05D007805 4.6e-21 104.4 78 62.8
Medtr7g098010 Medicago truncatula HOM05D004940 ORTHO05D007805 6.0e-21 104.0 78 62.8
Oeu028892.3 Olea europaea HOM05D004940 ORTHO05D007805 6.0e-21 104.0 78 65.4
TAR362G0048 Trochodendron aralioides HOM05D004940 ORTHO05D007805 6.0e-21 104.0 78 60.3
arahy.Tifrunner.gnm1.ann1.N1VHSE Arachis hypogaea HOM05D004940 ORTHO05D007805 7.8e-21 103.6 78 61.5
arahy.Tifrunner.gnm1.ann1.YK26R7 Arachis hypogaea HOM05D004940 ORTHO05D007805 7.8e-21 103.6 78 61.5
Glyma.03G165500 Glycine max HOM05D004940 ORTHO05D007805 7.8e-21 103.6 78 62.8
Potri.014G195500 Populus trichocarpa HOM05D004940 ORTHO05D007805 1.0e-20 103.2 79 60.8
Gohir.A08G045700 Gossypium hirsutum HOM05D004940 ORTHO05D007805 1.3e-20 102.8 79 64.6
Manes.12G035200 Manihot esculenta HOM05D004940 ORTHO05D007805 1.3e-20 102.8 79 60.8
Phvul.001G163200 Phaseolus vulgaris HOM05D004940 ORTHO05D007805 1.3e-20 102.8 79 59.5
TPR.G9192 Trifolium pratense HOM05D004940 ORTHO05D007805 1.3e-20 102.8 78 61.5
MD05G1192400 Malus domestica HOM05D004940 ORTHO05D007805 1.7e-20 102.4 78 60.3
Ciclev10019263m.g Citrus clementina HOM05D004940 ORTHO05D007805 3.0e-20 101.7 78 60.3
SHI09711 Sapria himalayana HOM05D004940 ORTHO05D018819 3.9e-20 101.3 79 59.5
Aqoxy5G00176 Aquilegia oxysepala HOM05D004940 ORTHO05D007805 5.1e-20 100.9 56 75.0
HanXRQChr04g0111301 Helianthus annuus HOM05D004940 ORTHO05D007805 5.1e-20 100.9 56 80.4
Nn1g02898 Nelumbo nucifera HOM05D004940 ORTHO05D007805 5.1e-20 100.9 56 73.2
Gohir.D08G056200 Gossypium hirsutum HOM05D004940 ORTHO05D007805 6.6e-20 100.5 78 64.1
Gorai.004G057300 Gossypium raimondii HOM05D004940 ORTHO05D007805 6.6e-20 100.5 78 64.1
PSO764G0099 Papaver somniferum HOM05D004940 ORTHO05D007805 6.6e-20 100.5 78 60.3
PSO832G3423 Papaver somniferum HOM05D004940 ORTHO05D007805 6.6e-20 100.5 78 60.3
RcHm_v2.0_Chr6g0287291 Rosa chinensis HOM05D004940 ORTHO05D007805 6.6e-20 100.5 78 59.0
Lsat_1_v5_gn_8_92240 Lactuca sativa HOM05D004940 ORTHO05D007805 8.6e-20 100.1 78 61.5
MD10G1178900 Malus domestica HOM05D004940 ORTHO05D007805 8.6e-20 100.1 78 59.0
GSVIVG01028386001 Vitis vinifera HOM05D004940 ORTHO05D007805 8.6e-20 100.1 78 59.0
Ca_08723_v3 Cicer arietinum L. HOM05D004940 ORTHO05D007805 1.1e-19 99.8 78 60.3
DCAR_018506 Daucus carota HOM05D004940 ORTHO05D007805 1.1e-19 99.8 80 58.8
MBI07_g18994_MAGBIO Magnolia biondii HOM05D004940 ORTHO05D007805 1.1e-19 99.8 56 71.4
AUR62025474 Chenopodium quinoa HOM05D004940 ORTHO05D007805 1.5e-19 99.4 57 77.2
ECA236G4817 Erigeron canadensis HOM05D004940 ORTHO05D007805 1.5e-19 99.4 78 61.5
VMungo1383G2176 Vigna mungo HOM05D004940 ORTHO05D007805 1.5e-19 99.4 79 58.2
QL09p040550 Quercus lobata HOM05D004940 ORTHO05D007805 1.9e-19 99.0 55 76.4
Sabra14G0144700 Salix brachista HOM05D004940 ORTHO05D007805 1.9e-19 99.0 79 59.5
Migut.N02221 Erythranthe guttata HOM05D004940 ORTHO05D007805 2.5e-19 98.6 56 80.4
Sc24g0003690 Simmondsia chinensis HOM05D004940 ORTHO05D007805 3.3e-19 98.2 78 59.0
Haze_24676 Corylus avellana HOM05D004940 ORTHO05D007805 4.3e-19 97.8 57 71.9
Hund05470 Selenicereus undatus HOM05D004940 ORTHO05D007805 4.3e-19 97.8 78 59.0
Eucgr.A01366 Eucalyptus grandis HOM05D004940 ORTHO05D007805 5.6e-19 97.4 56 69.6
Nitab4.5_0002389g0100 Nicotiana tabacum HOM05D004940 ORTHO05D007805 5.6e-19 97.4 78 60.3
Nitab4.5_0003295g0190 Nicotiana tabacum HOM05D004940 ORTHO05D007805 5.6e-19 97.4 78 60.3
AUR62008763 Chenopodium quinoa HOM05D004940 ORTHO05D007805 9.5e-19 96.7 56 76.8
CsaV3_3G028180 Cucumis sativus L. HOM05D004940 ORTHO05D007805 1.6e-18 95.9 78 57.7
Manes.13G037500 Manihot esculenta HOM05D004940 ORTHO05D007805 1.6e-18 95.9 79 59.5
Migut.D00459 Erythranthe guttata HOM05D004940 ORTHO05D007805 2.1e-18 95.5 56 78.6
SGA_v2.0_scaffold1G00640 Striga asiatica HOM05D004940 ORTHO05D007805 2.1e-18 95.5 58 74.1
CANSAT01G2138 Cannabis sativa HOM05D004940 ORTHO05D007805 2.8e-18 95.1 78 55.1
Peaxi162Scf00415g00416 Petunia axillaris HOM05D004940 ORTHO05D007805 2.8e-18 95.1 77 59.7
Solyc09g072710.4 Solanum lycopersicum HOM05D004940 ORTHO05D007805 2.8e-18 95.1 78 57.7
Sopen09g028520 Solanum pennellii HOM05D004940 ORTHO05D007805 2.8e-18 95.1 78 57.7
EL10Ac7g17647 Beta vulgaris HOM05D004940 ORTHO05D007805 3.6e-18 94.7 56 75.0
Cpa.g.sc165.41 Carica papaya HOM05D004940 ORTHO05D007805 6.2e-18 94.0 56 71.4
Lalb_Chr01g0019571 Lupinus albus HOM05D004940 ORTHO05D007805 6.2e-18 94.0 78 56.4
CiPaw.03G268400 Carya illinoinensis HOM05D004940 ORTHO05D007805 8.1e-18 93.6 78 59.0
CAN.G1270.3 Capsicum annuum HOM05D004940 ORTHO05D007805 1.1e-17 93.2 56 73.2
ClCG07G001250 Citrullus lanatus HOM05D004940 ORTHO05D007805 1.1e-17 93.2 78 55.1
ATR0736G200 Amborella trichopoda HOM05D004940 ORTHO05D007805 1.4e-17 92.8 56 73.2
DCAR_000927 Daucus carota HOM05D004940 ORTHO05D007805 1.4e-17 92.8 78 59.0
Thhalv10007051m.g Eutrema salsugineum HOM05D004940 ORTHO05D007805 1.4e-17 92.8 55 72.7
PGR031G0691 Punica granatum HOM05D004940 ORTHO05D007805 1.4e-17 92.8 56 71.4
Aa31LG1G20810 Aethionema arabicum HOM05D004940 ORTHO05D007805 1.8e-17 92.4 78 53.8
Atru.chr5.1783 Acer truncatum HOM05D004940 ORTHO05D007805 2.4e-17 92.0 78 56.4
Atru.chr5.1786 Acer truncatum HOM05D004940 ORTHO05D007805 2.4e-17 92.0 78 56.4
FAN15G2608 Fragaria x ananassa HOM05D004940 ORTHO05D007805 2.4e-17 92.0 78 55.1
FAN20G1599 Fragaria x ananassa HOM05D004940 ORTHO05D007805 2.4e-17 92.0 78 55.1
FAN27G1261 Fragaria x ananassa HOM05D004940 ORTHO05D007805 2.4e-17 92.0 78 55.1
Sed0008536 Sechium edule HOM05D004940 ORTHO05D007805 2.4e-17 92.0 78 55.1
THA.LOC104826048 Tarenaya hassleriana HOM05D004940 ORTHO05D007805 3.1e-17 91.7 78 56.4
BcaC05g24475 Brassica carinata HOM05D004940 ORTHO05D007805 4.0e-17 91.3 55 69.1
A10p02520 Brassica napus HOM05D004940 ORTHO05D007805 4.0e-17 91.3 55 69.1
C05p02330 Brassica napus HOM05D004940 ORTHO05D007805 4.0e-17 91.3 55 69.1
BolC5t29011H Brassica oleracea HOM05D004940 ORTHO05D007805 4.0e-17 91.3 55 69.1
BraA10t42520Z Brassica rapa HOM05D004940 ORTHO05D007805 4.0e-17 91.3 55 69.1
Sp1g02850 Schrenkiella parvula HOM05D004940 ORTHO05D007805 4.0e-17 91.3 55 70.9
Zm00001eb258680 Zea mays HOM05D004940 ORTHO05D007805 8.9e-17 90.1 78 53.8
BcaC07g42217 Brassica carinata HOM05D004940 ORTHO05D007805 1.2e-16 89.7 55 69.1
Carub.0001s0317 Capsella rubella HOM05D004940 ORTHO05D007805 1.2e-16 89.7 55 69.1
CARHR003360 Cardamine hirsuta HOM05D004940 ORTHO05D007805 1.2e-16 89.7 55 69.1
AL1G13620 Arabidopsis lyrata HOM05D004940 ORTHO05D007805 1.5e-16 89.4 55 69.1
AT1G04010 Arabidopsis thaliana HOM05D004940 ORTHO05D007805 2.0e-16 89.0 55 69.1
FAN24G3024 Fragaria x ananassa HOM05D004940 ORTHO05D007805 5.8e-16 87.4 78 53.8
A09p68080 Brassica napus HOM05D004940 ORTHO05D007805 9.9e-16 86.7 55 67.3
C08p52520 Brassica napus HOM05D004940 ORTHO05D007805 9.9e-16 86.7 55 67.3
BolC8t52779H Brassica oleracea HOM05D004940 ORTHO05D007805 9.9e-16 86.7 55 67.3
BraA09t42143Z Brassica rapa HOM05D004940 ORTHO05D007805 9.9e-16 86.7 55 67.3
FvH4_2g20890 Fragaria vesca HOM05D004940 ORTHO05D007805 4.9e-15 84.3 78 52.6
SEGI_08888 Sequoiadendron giganteum HOM05D004940 ORTHO05D007805 3.2e-14 81.6 56 64.3
Pp3c16_20320 Physcomitrium patens HOM05D004940 ORTHO05D007805 2.7e-13 78.6 54 64.8
AagrBONN_evm.TU.Sc2ySwM_344.1925 Anthoceros agrestis HOM05D004940 ORTHO05D007805 8.7e-12 73.6 55 60.0
SMO137G0189 Selaginella moellendorffii HOM05D004940 ORTHO05D007805 5.6e-11 70.9 54 59.3
Mapoly0023s0070 Marchantia polymorpha HOM05D004940 ORTHO05D007805 7.3e-11 70.5 54 59.3
SMO137G0113 Selaginella moellendorffii HOM05D004940 ORTHO05D007805 6.2e-10 67.4 78 41.0
HPP92_012808 Vanilla planifolia HOM05D004940 ORTHO05D007805 1.7e-07 59.3 31 80.6


User provided reference genes

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