Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0026525 Camellia sinensis var. sinensis HOM05D003563 ORTHO05D015420 2.6e-39 164.9 79 100.0
Duzib093G1625 Durio zibethinus HOM05D003563 ORTHO05D005325 1.2e-28 129.4 89 71.9
SalBow7G2312 Salvia bowleyana HOM05D003563 ORTHO05D005325 1.2e-28 129.4 87 73.6
Cc10_g02970 Coffea canephora HOM05D003563 ORTHO05D005325 1.6e-28 129.0 87 73.6
Rhsim06G0034400 Rhododendron simsii HOM05D003563 ORTHO05D005325 1.6e-28 129.0 87 73.6
TWI56G0595 Tripterygium wilfordii HOM05D003563 ORTHO05D005325 1.6e-28 129.0 87 73.6
ATR0057G040 Amborella trichopoda HOM05D003563 ORTHO05D005325 2.1e-28 128.6 87 73.6
CARHR181650 Cardamine hirsuta HOM05D003563 ORTHO05D005325 2.1e-28 128.6 87 71.3
COL.COLO4_26329 Corchorus olitorius HOM05D003563 ORTHO05D005325 2.1e-28 128.6 87 73.6
Gohir.D01G104300 Gossypium hirsutum HOM05D003563 ORTHO05D005325 2.1e-28 128.6 87 73.6
Gorai.002G128400 Gossypium raimondii HOM05D003563 ORTHO05D005325 2.1e-28 128.6 87 73.6
Sp2g07360 Schrenkiella parvula HOM05D003563 ORTHO05D005325 2.1e-28 128.6 87 72.4
Sed0015721 Sechium edule HOM05D003563 ORTHO05D005325 2.1e-28 128.6 87 73.6
Sed0018414 Sechium edule HOM05D003563 ORTHO05D005325 2.1e-28 128.6 87 73.6
HPP92_002698 Vanilla planifolia HOM05D003563 ORTHO05D005325 2.1e-28 128.6 87 72.4
AT5G42740 Arabidopsis thaliana HOM05D003563 ORTHO05D005325 3.5e-28 127.9 87 72.4
Nitab4.5_0009269g0010 Nicotiana tabacum HOM05D003563 ORTHO05D005325 3.5e-28 127.9 87 73.6
CARHR213980 Cardamine hirsuta HOM05D003563 ORTHO05D005325 4.6e-28 127.5 87 71.3
SGA_v2.0_scaffold54G19524 Striga asiatica HOM05D003563 ORTHO05D005325 4.6e-28 127.5 87 72.4
THA.LOC104798643 Tarenaya hassleriana HOM05D003563 ORTHO05D005325 4.6e-28 127.5 87 71.3
Thecc.08G025500 Theobroma cacao HOM05D003563 ORTHO05D005325 4.6e-28 127.5 87 72.4
HPP92_002716 Vanilla planifolia HOM05D003563 ORTHO05D005325 4.6e-28 127.5 87 71.3
Atru.chr13.492 Acer truncatum HOM05D003563 ORTHO05D005325 6.0e-28 127.1 87 72.4
arahy.Tifrunner.gnm1.ann1.7JQX15 Arachis hypogaea HOM05D003563 ORTHO05D005325 6.0e-28 127.1 87 72.4
arahy.Tifrunner.gnm1.ann1.UW0ZL7 Arachis hypogaea HOM05D003563 ORTHO05D005325 6.0e-28 127.1 87 72.4
CANSAT25G0144 Cannabis sativa HOM05D003563 ORTHO05D005325 6.0e-28 127.1 89 71.9
Cfa018145 Carpinus fangiana HOM05D003563 ORTHO05D005325 6.0e-28 127.1 87 72.4
Ca_04241_v3 Cicer arietinum L. HOM05D003563 ORTHO05D005325 6.0e-28 127.1 87 72.4
ClCG08G015170 Citrullus lanatus HOM05D003563 ORTHO05D005325 6.0e-28 127.1 87 72.4
Haze_07272 Corylus avellana HOM05D003563 ORTHO05D005325 6.0e-28 127.1 87 72.4
MELO3C010936.2 Cucumis melo HOM05D003563 ORTHO05D005325 6.0e-28 127.1 87 72.4
CsaV3_2G028640 Cucumis sativus L. HOM05D003563 ORTHO05D005325 6.0e-28 127.1 87 72.4
Migut.C00716 Erythranthe guttata HOM05D003563 ORTHO05D005325 6.0e-28 127.1 87 72.4
Eucgr.F01561 Eucalyptus grandis HOM05D003563 ORTHO05D005325 6.0e-28 127.1 87 72.4
MBI16_g36556_MAGBIO Magnolia biondii HOM05D003563 ORTHO05D005325 6.0e-28 127.1 87 72.4
Manes.05G160800 Manihot esculenta HOM05D003563 ORTHO05D005325 6.0e-28 127.1 87 71.3
Medtr6g009330 Medicago truncatula HOM05D003563 ORTHO05D005325 6.0e-28 127.1 87 72.4
PSO541G4717 Papaver somniferum HOM05D003563 ORTHO05D005325 6.0e-28 127.1 87 72.4
PSO675G8753 Papaver somniferum HOM05D003563 ORTHO05D005325 6.0e-28 127.1 87 72.4
TPR.G32590 Trifolium pratense HOM05D003563 ORTHO05D005325 6.0e-28 127.1 87 72.4
GSVIVG01009697001 Vitis vinifera HOM05D003563 ORTHO05D005325 6.0e-28 127.1 87 72.4
Peaxi162Scf00333g00512 Petunia axillaris HOM05D003563 ORTHO05D005325 7.8e-28 126.7 87 72.4
Hund14325 Selenicereus undatus HOM05D003563 ORTHO05D005325 7.8e-28 126.7 74 82.4
BcaB07g31058 Brassica carinata HOM05D003563 ORTHO05D005325 1.0e-27 126.3 87 71.3
BcaC04g21978 Brassica carinata HOM05D003563 ORTHO05D005325 1.0e-27 126.3 87 71.3
A09p19900 Brassica napus HOM05D003563 ORTHO05D005325 1.0e-27 126.3 87 71.3
C09p25230 Brassica napus HOM05D003563 ORTHO05D005325 1.0e-27 126.3 87 71.3
BolC9t55419H Brassica oleracea HOM05D003563 ORTHO05D005325 1.0e-27 126.3 87 71.3
BraA09t37600Z Brassica rapa HOM05D003563 ORTHO05D005325 1.0e-27 126.3 87 71.3
Cpa.g.sc36.68 Carica papaya HOM05D003563 ORTHO05D005325 1.0e-27 126.3 87 71.3
Solyc12g014380.3 Solanum lycopersicum HOM05D003563 ORTHO05D005325 1.0e-27 126.3 87 71.3
Sopen12g006150 Solanum pennellii HOM05D003563 ORTHO05D005325 1.0e-27 126.3 87 71.3
Aqoxy6G01090 Aquilegia oxysepala HOM05D003563 ORTHO05D005325 1.3e-27 125.9 87 71.3
vmacro21635 Vaccinium macrocarpon HOM05D003563 ORTHO05D005325 1.3e-27 125.9 87 72.4
CSS0002435 Camellia sinensis var. sinensis HOM05D003563 ORTHO05D005325 1.7e-27 125.6 87 72.4
Phvul.009G057500 Phaseolus vulgaris HOM05D003563 ORTHO05D005325 1.7e-27 125.6 87 71.3
Psat1g077120 Pisum sativum HOM05D003563 ORTHO05D005325 1.7e-27 125.6 87 71.3
PGR083G2760 Punica granatum HOM05D003563 ORTHO05D005325 1.7e-27 125.6 87 70.1
QL02p008438 Quercus lobata HOM05D003563 ORTHO05D005325 1.7e-27 125.6 87 71.3
CANSAT21G1125 Cannabis sativa HOM05D003563 ORTHO05D005325 2.3e-27 125.2 89 70.8
Carub.0008s0621 Capsella rubella HOM05D003563 ORTHO05D005325 2.3e-27 125.2 87 71.3
Glyma.19G017200 Glycine max HOM05D003563 ORTHO05D005325 2.3e-27 125.2 87 71.3
Gohir.A01G116000 Gossypium hirsutum HOM05D003563 ORTHO05D005325 2.3e-27 125.2 87 72.4
MD08G1034600 Malus domestica HOM05D003563 ORTHO05D005325 2.3e-27 125.2 87 72.4
MD15G1031400 Malus domestica HOM05D003563 ORTHO05D005325 2.3e-27 125.2 87 72.4
Phvul.004G023500 Phaseolus vulgaris HOM05D003563 ORTHO05D005325 2.3e-27 125.2 87 71.3
VMungo0464G1044 Vigna mungo HOM05D003563 ORTHO05D005325 2.3e-27 125.2 87 71.3
CiPaw.15G077500 Carya illinoinensis HOM05D003563 ORTHO05D005325 3.0e-27 124.8 87 71.3
Aa31LG9G12790 Aethionema arabicum HOM05D003563 ORTHO05D005325 3.9e-27 124.4 87 71.3
DCAR_020972 Daucus carota HOM05D003563 ORTHO05D005325 3.9e-27 124.4 87 70.1
TAR381G1659 Trochodendron aralioides HOM05D003563 ORTHO05D005325 3.9e-27 124.4 87 70.1
unitig_37.g12990 Utricularia gibba HOM05D003563 ORTHO05D005325 3.9e-27 124.4 87 70.1
VMungo1309G1719 Vigna mungo HOM05D003563 ORTHO05D005325 3.9e-27 124.4 87 70.1
MSTRG.25165 Avicennia marina HOM05D003563 ORTHO05D005325 5.1e-27 124.0 87 70.1
Nn1g05025 Nelumbo nucifera HOM05D003563 ORTHO05D005325 5.1e-27 124.0 87 70.1
Nn5g29576 Nelumbo nucifera HOM05D003563 ORTHO05D005325 5.1e-27 124.0 87 71.3
Os03g0776000 Oryza sativa ssp. japonica HOM05D003563 ORTHO05D005325 5.1e-27 124.0 87 70.1
Potri.008G118900 Populus trichocarpa HOM05D003563 ORTHO05D005325 5.1e-27 124.0 87 70.1
Sabra08G0090300 Salix brachista HOM05D003563 ORTHO05D005325 5.1e-27 124.0 87 70.1
EL10Ac5g11903 Beta vulgaris HOM05D003563 ORTHO05D005325 6.6e-27 123.6 87 71.3
AUR62007425 Chenopodium quinoa HOM05D003563 ORTHO05D005325 6.6e-27 123.6 87 71.3
AUR62027308 Chenopodium quinoa HOM05D003563 ORTHO05D005325 6.6e-27 123.6 87 71.3
Dinv36074 Davidia involucrata HOM05D003563 ORTHO05D005325 6.6e-27 123.6 87 71.3
Lalb_Chr23g0266621 Lupinus albus HOM05D003563 ORTHO05D005325 6.6e-27 123.6 87 70.1
Prupe.1G380500 Prunus persica HOM05D003563 ORTHO05D005325 6.6e-27 123.6 87 71.3
Sc02g0006230 Simmondsia chinensis HOM05D003563 ORTHO05D005325 6.6e-27 123.6 87 71.3
Lj4A41G56 Lonicera japonica HOM05D003563 ORTHO05D005325 8.7e-27 123.2 87 70.1
Lj7C352G3 Lonicera japonica HOM05D003563 ORTHO05D005325 8.7e-27 123.2 87 70.1
Oeu029861.1 Olea europaea HOM05D003563 ORTHO05D005325 8.7e-27 123.2 87 70.1
Ciclev10000722m.g Citrus clementina HOM05D003563 ORTHO05D005325 1.1e-26 122.9 87 70.1
MSTRG.1282 Avicennia marina HOM05D003563 ORTHO05D005325 1.5e-26 122.5 87 70.1
Lj1g0022254 Lotus japonicus HOM05D003563 ORTHO05D005325 1.5e-26 122.5 87 70.1
Os06g0256500 Oryza sativa ssp. japonica HOM05D003563 ORTHO05D005325 1.5e-26 122.5 87 70.1
CDE05G1619 Ceratophyllum demersum HOM05D003563 ORTHO05D005325 1.9e-26 122.1 87 70.1
FvH4_2g39910 Fragaria vesca HOM05D003563 ORTHO05D005325 1.9e-26 122.1 87 70.1
FAN15G3737 Fragaria x ananassa HOM05D003563 ORTHO05D005325 1.9e-26 122.1 87 70.1
FAN27G1814 Fragaria x ananassa HOM05D003563 ORTHO05D005325 1.9e-26 122.1 87 70.1
RcHm_v2.0_Chr6g0300881 Rosa chinensis HOM05D003563 ORTHO05D005325 1.9e-26 122.1 87 70.1
Ah.02g117440 Amaranthus hybridus HOM05D003563 ORTHO05D005325 3.3e-26 121.3 87 70.1
Dinv39412 Davidia involucrata HOM05D003563 ORTHO05D005325 3.3e-26 121.3 87 71.3
Glyma.04G032600 Glycine max HOM05D003563 ORTHO05D005325 3.3e-26 121.3 87 69.0
Glyma.06G032500 Glycine max HOM05D003563 ORTHO05D005325 3.3e-26 121.3 87 69.0
Manes.18G027800 Manihot esculenta HOM05D003563 ORTHO05D005325 3.3e-26 121.3 87 69.0
SHI08159 Sapria himalayana HOM05D003563 ORTHO05D005325 3.3e-26 121.3 87 69.0
SEGI_25229 Sequoiadendron giganteum HOM05D003563 ORTHO05D005325 4.3e-26 120.9 87 69.0
Thhalv10003173m.g Eutrema salsugineum HOM05D003563 ORTHO05D005325 5.6e-26 120.6 87 69.0
HanXRQChr09g0268611 Helianthus annuus HOM05D003563 ORTHO05D005325 9.6e-26 119.8 87 69.0
Zm00001eb059230 Zea mays HOM05D003563 ORTHO05D005325 9.6e-26 119.8 87 69.0
Lsat_1_v5_gn_4_119160 Lactuca sativa HOM05D003563 ORTHO05D005325 1.6e-25 119.0 87 67.8
SMO340G0102 Selaginella moellendorffii HOM05D003563 ORTHO05D005325 2.1e-25 118.6 87 67.8
AagrBONN_evm.TU.Sc2ySwM_228.405 Anthoceros agrestis HOM05D003563 ORTHO05D005325 2.8e-25 118.2 87 67.8
ECA232G1124 Erigeron canadensis HOM05D003563 ORTHO05D005325 2.8e-25 118.2 87 67.8
Mapoly0034s0044 Marchantia polymorpha HOM05D003563 ORTHO05D005325 4.7e-25 117.5 87 67.8
MCO02G104 Micromonas commoda HOM05D003563 ORTHO05D005325 4.7e-25 117.5 90 66.7
CAN.G233.10 Capsicum annuum HOM05D003563 ORTHO05D005325 2.4e-24 115.2 80 71.2
Hma1.2p1_0203F.1_g086419 Hydrangea macrophylla HOM05D003563 ORTHO05D005325 2.4e-24 115.2 85 68.2
CBR_g3932 Chara braunii HOM05D003563 ORTHO05D005325 3.1e-24 114.8 87 65.5
Cre03.g175400 Chlamydomonas reinhardtii HOM05D003563 ORTHO05D005325 5.2e-24 114.0 87 66.7
CBR_g52178 Chara braunii HOM05D003563 ORTHO05D005325 9.0e-24 113.2 87 64.4
AagrBONN_evm.TU.Sc2ySwM_344.3288 Anthoceros agrestis HOM05D003563 ORTHO05D005325 1.5e-23 112.5 87 65.5
AagrBONN_evm.TU.Sc2ySwM_368.1410 Anthoceros agrestis HOM05D003563 ORTHO05D005325 3.4e-23 111.3 87 64.4
FAN20G1254 Fragaria x ananassa HOM05D003563 ORTHO05D005325 4.4e-23 110.9 84 67.9
Pp3c6_18070 Physcomitrium patens HOM05D003563 ORTHO05D005325 7.6e-23 110.2 87 63.2
Oeu049958.2 Olea europaea HOM05D003563 ORTHO05D005325 9.9e-23 109.8 138 46.4
CDE11G0237 Ceratophyllum demersum HOM05D003563 ORTHO05D005325 1.3e-22 109.4 87 62.1
Hma1.2p1_0105F.1_g050870 Hydrangea macrophylla HOM05D003563 ORTHO05D005325 1.7e-22 109.0 79 69.6
Hma1.2p1_0105F.1_g050873 Hydrangea macrophylla HOM05D003563 ORTHO05D005325 1.7e-22 109.0 79 69.6
Hma1.2p1_0105F.1_g050876 Hydrangea macrophylla HOM05D003563 ORTHO05D005325 1.7e-22 109.0 79 69.6
Pp3c5_3820 Physcomitrium patens HOM05D003563 ORTHO05D005325 2.9e-22 108.2 87 60.9
Hma1.2p1_0105F.1_g050879 Hydrangea macrophylla HOM05D003563 ORTHO05D005325 3.8e-22 107.8 79 68.4
PRCOL_00005031 Prasinoderma coloniale HOM05D003563 ORTHO05D005325 4.9e-22 107.5 87 62.1
Pp3c16_6380 Physcomitrium patens HOM05D003563 ORTHO05D005325 1.9e-21 105.5 87 60.9
Pp3c25_1860 Physcomitrium patens HOM05D003563 ORTHO05D005325 2.4e-21 105.1 87 60.9
SMO119G0154 Selaginella moellendorffii HOM05D003563 ORTHO05D005325 2.4e-21 105.1 87 60.9
PRCOL_00005550 Prasinoderma coloniale HOM05D003563 ORTHO05D005325 4.0e-16 87.8 89 55.1
CSS0015322 Camellia sinensis var. sinensis HOM05D003563 ORTHO05D015420 1.9e-13 79.0 62 66.1
CSS0012340 Camellia sinensis var. sinensis HOM05D003563 ORTHO05D015420 3.5e-12 74.7 65 63.1
PSO675G6005 Papaver somniferum HOM05D003563 ORTHO05D015420 7.9e-12 73.6 67 55.2
PSO782G5532 Papaver somniferum HOM05D003563 ORTHO05D015420 1.0e-11 73.2 67 55.2
BcaB07g31057 Brassica carinata HOM05D003563 ORTHO05D005325 3.3e-10 68.2 74 50.0
PSO210G3800 Papaver somniferum HOM05D003563 ORTHO05D015420 3.3e-10 68.2 67 52.2
Actinidia15322 Actinidia chinensis HOM05D003563 ORTHO05D005325 4.3e-10 67.8 34 88.2
VMungo0464G1852 Vigna mungo HOM05D003563 ORTHO05D005325 5.6e-10 67.4 74 51.4
CSS0045943 Camellia sinensis var. sinensis HOM05D003563 ORTHO05D005325 9.6e-10 66.6 38 84.2
GSVIVG01037334001 Vitis vinifera HOM05D003563 ORTHO05D015420 2.1e-09 65.5 41 73.2
QL02p008415 Quercus lobata HOM05D000526 ORTHO05D004783 3.7e-09 64.7 50 64.0
Rhsim09G0022100 Rhododendron simsii HOM05D003003 ORTHO05D008343 8.1e-09 63.5 75 52.0
PSO478G3448 Papaver somniferum HOM05D003563 ORTHO05D015420 4.0e-08 61.2 54 57.4
Cfa022173 Carpinus fangiana HOM05D003563 ORTHO05D005325 2.0e-07 58.9 84 44.0
arahy.Tifrunner.gnm1.ann1.AW6XP7 Arachis hypogaea HOM05D005766 ORTHO05D007002 2.6e-07 58.5 74 47.3
Haze_26983 Corylus avellana HOM05D003563 ORTHO05D005325 2.6e-07 58.5 84 41.7
arahy.Tifrunner.gnm1.ann1.I4AQ4M Arachis hypogaea HOM05D003563 ORTHO05D015420 1.3e-06 56.2 74 41.9
Haze_26669 Corylus avellana HOM05D003563 ORTHO05D005325 1.7e-06 55.8 85 34.1


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