Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0026512 Camellia sinensis var. sinensis HOM05D000085 ORTHO05D009791 4.4e-68 261.2 131 100.0
CSS0024542 Camellia sinensis var. sinensis HOM05D000085 ORTHO05D009791 2.4e-58 228.8 115 99.1
Actinidia29501 Actinidia chinensis HOM05D000085 ORTHO05D009791 3.6e-38 161.8 104 74.0
Actinidia03435 Actinidia chinensis HOM05D000085 ORTHO05D009791 6.4e-35 151.0 104 71.2
Hma1.2p1_0107F.1_g051220 Hydrangea macrophylla HOM05D000085 ORTHO05D009791 5.4e-34 147.9 103 67.0
Lj4A685T34 Lonicera japonica HOM05D000085 ORTHO05D009791 1.5e-31 139.8 103 64.1
Prupe.8G012500 Prunus persica HOM05D000085 ORTHO05D009791 1.6e-30 136.3 100 64.0
Prupe.8G012300 Prunus persica HOM05D008363 ORTHO05D009791 1.1e-29 133.7 100 63.0
ClCG08G006270 Citrullus lanatus HOM05D000085 ORTHO05D009791 2.4e-29 132.5 99 61.6
Thecc.08G138000 Theobroma cacao HOM05D000085 ORTHO05D009791 2.4e-29 132.5 108 59.3
TWI60G0672 Tripterygium wilfordii HOM05D000085 ORTHO05D009791 2.0e-28 129.4 100 60.0
MELO3C008431.2 Cucumis melo HOM05D000085 ORTHO05D009791 4.5e-28 128.3 98 60.2
Potri.005G185500 Populus trichocarpa HOM05D000085 ORTHO05D009791 5.8e-28 127.9 100 61.0
MBI03_g20848_MAGBIO Magnolia biondii HOM05D000085 ORTHO05D009791 1.3e-27 126.7 112 56.2
CAN.G46.6 Capsicum annuum HOM05D000085 ORTHO05D009791 1.7e-27 126.3 114 51.8
Duzib093G0943 Durio zibethinus HOM05D000085 ORTHO05D009791 1.7e-27 126.3 101 57.4
Manes.02G172500 Manihot esculenta HOM05D000085 ORTHO05D009791 2.2e-27 125.9 102 61.8
Cpa.g.sc26.71 Carica papaya HOM05D000085 ORTHO05D009791 2.9e-27 125.6 99 60.6
Sopen04g026290 Solanum pennellii HOM05D000085 ORTHO05D009791 2.9e-27 125.6 114 51.8
CsaV3_6G031170 Cucumis sativus L. HOM05D000085 ORTHO05D009791 3.8e-27 125.2 98 59.2
FAN27G0973 Fragaria x ananassa HOM05D000085 ORTHO05D009791 3.8e-27 125.2 99 61.6
TAR628G0721 Trochodendron aralioides HOM05D000085 ORTHO05D009791 3.8e-27 125.2 111 56.8
FvH4_2g15260 Fragaria vesca HOM05D000085 ORTHO05D009791 4.9e-27 124.8 99 60.6
FAN15G3404 Fragaria x ananassa HOM05D000085 ORTHO05D009791 4.9e-27 124.8 99 60.6
Sed0010025 Sechium edule HOM05D000085 ORTHO05D009791 4.9e-27 124.8 93 61.3
Solyc04g063370.3 Solanum lycopersicum HOM05D000085 ORTHO05D009791 4.9e-27 124.8 114 50.9
Migut.C01091 Erythranthe guttata HOM05D000085 ORTHO05D009791 1.4e-26 123.2 112 52.7
RcHm_v2.0_Chr6g0277981 Rosa chinensis HOM05D000085 ORTHO05D009791 1.4e-26 123.2 99 58.6
Atru.chr13.1646 Acer truncatum HOM05D000085 ORTHO05D009791 2.4e-26 122.5 108 60.2
Gorai.005G084800 Gossypium raimondii HOM05D000085 ORTHO05D009791 3.2e-26 122.1 105 56.2
Aqoxy6G00346 Aquilegia oxysepala HOM05D000485 ORTHO05D009791 4.2e-26 121.7 94 59.6
DCAR_031504 Daucus carota HOM05D000085 ORTHO05D009791 5.5e-26 121.3 102 50.0
Ciclev10003429m.g Citrus clementina HOM05D000085 ORTHO05D009791 1.6e-25 119.8 99 59.6
Peaxi162Scf00066g01519 Petunia axillaris HOM05D000085 ORTHO05D009791 7.9e-25 117.5 100 52.0
Manes.18G084900 Manihot esculenta HOM05D000085 ORTHO05D009791 1.0e-24 117.1 109 56.0
MD05G1010000 Malus domestica HOM05D000085 ORTHO05D009791 1.3e-24 116.7 100 55.0
COL.COLO4_07812 Corchorus olitorius HOM05D000085 ORTHO05D009791 1.8e-24 116.3 99 56.6
MD10G1008700 Malus domestica HOM05D000085 ORTHO05D009791 1.8e-24 116.3 100 54.0
Nitab4.5_0000174g0070 Nicotiana tabacum HOM05D000085 ORTHO05D009791 8.7e-24 114.0 121 45.5
Lsat_1_v5_gn_4_135701 Lactuca sativa HOM05D000085 ORTHO05D009791 1.8e-21 106.3 102 49.0
Aqoxy6G00345 Aquilegia oxysepala HOM05D000085 ORTHO05D009791 2.4e-21 105.9 94 54.3
Cfa018397 Carpinus fangiana HOM05D000085 ORTHO05D009791 2.4e-21 105.9 100 49.0
Phvul.009G133000 Phaseolus vulgaris HOM05D000085 ORTHO05D009791 5.3e-21 104.8 105 50.5
GSVIVG01009979001 Vitis vinifera HOM05D000085 ORTHO05D009791 5.3e-21 104.8 102 52.9
CANSAT21G2494 Cannabis sativa HOM05D000085 ORTHO05D009791 9.0e-21 104.0 100 55.0
VMungo1309G2437 Vigna mungo HOM05D000085 ORTHO05D009791 2.0e-20 102.8 104 50.0
Gohir.A02G068901 Gossypium hirsutum HOM05D000085 ORTHO05D009791 3.4e-20 102.1 101 52.5
SalBow7G4502 Salvia bowleyana HOM05D000085 ORTHO05D009791 7.6e-20 100.9 103 47.6
CSS0036630 Camellia sinensis var. sinensis HOM05D000085 ORTHO05D009791 2.9e-19 99.0 67 73.1
Lj1g0014811 Lotus japonicus HOM05D000085 ORTHO05D009791 2.9e-19 99.0 99 50.5
Cc10_g13260 Coffea canephora HOM05D000085 ORTHO05D009791 3.8e-19 98.6 103 49.5
Gohir.D02G075666 Gossypium hirsutum HOM05D000085 ORTHO05D009791 3.8e-19 98.6 92 53.3
Glyma.06G120400 Glycine max HOM05D000085 ORTHO05D009791 6.5e-19 97.8 99 50.5
Gorai.005G084900 Gossypium raimondii HOM05D000085 ORTHO05D009791 6.5e-19 97.8 92 52.2
TPR.G6314 Trifolium pratense HOM05D000085 ORTHO05D009791 6.5e-19 97.8 96 49.0
Prupe.8G012200 Prunus persica HOM05D000085 ORTHO05D009791 8.4e-19 97.4 103 48.5
arahy.Tifrunner.gnm1.ann1.8T63F8 Arachis hypogaea HOM05D000085 ORTHO05D009791 1.4e-18 96.7 107 49.5
ECA232G1150 Erigeron canadensis HOM05D000085 ORTHO05D009791 1.4e-18 96.7 101 43.6
arahy.Tifrunner.gnm1.ann1.NCK985 Arachis hypogaea HOM05D000085 ORTHO05D009791 1.9e-18 96.3 107 49.5
Glyma.13G036300 Glycine max HOM05D000085 ORTHO05D009791 1.9e-18 96.3 102 49.0
SalBow6G4001 Salvia bowleyana HOM05D000085 ORTHO05D009791 3.2e-18 95.5 116 44.0
HanXRQChr09g0254091 Helianthus annuus HOM05D000085 ORTHO05D009791 9.3e-18 94.0 105 42.9
Psat5g083480 Pisum sativum HOM05D000085 ORTHO05D009791 2.7e-17 92.4 89 46.1
Medtr3g088855 Medicago truncatula HOM05D000085 ORTHO05D009791 3.5e-17 92.0 97 43.3
Eucgr.F02764 Eucalyptus grandis HOM05D000085 ORTHO05D009791 3.9e-16 88.6 100 44.0
Haze_17669 Corylus avellana HOM05D000085 ORTHO05D009791 6.7e-16 87.8 83 47.0
Migut.N03251 Erythranthe guttata HOM05D000085 ORTHO05D009791 4.1e-13 78.6 98 38.8
Zm00001eb145720 Zea mays HOM05D000085 ORTHO05D009791 3.4e-12 75.5 91 42.9
SalBow6G0214 Salvia bowleyana HOM05D000085 ORTHO05D009791 3.2e-10 68.9 116 35.3
Gohir.A02G068900 Gossypium hirsutum HOM05D000085 ORTHO05D009791 1.6e-09 66.6 56 55.4
Gohir.D02G075400 Gossypium hirsutum HOM05D000085 ORTHO05D009791 1.6e-09 66.6 56 55.4
Thecc.10G132100 Theobroma cacao HOM05D000085 ORTHO05D006184 1.3e-08 63.5 102 39.2
Potri.003G189850 Populus trichocarpa HOM05D000085 ORTHO05D006184 1.5e-07 60.1 97 35.1
AagrBONN_evm.TU.Sc2ySwM_228.2886 Anthoceros agrestis HOM05D000085 ORTHO05D001756 1.3e-06 57.0 83 36.1
Ca_16635_v3 Cicer arietinum L. HOM05D000085 ORTHO05D009791 1.3e-06 57.0 51 45.1
Duzib114G0039 Durio zibethinus HOM05D000085 ORTHO05D006184 2.8e-06 55.8 115 32.2
Gohir.D10G199700 Gossypium hirsutum HOM05D000085 ORTHO05D006184 8.2e-06 54.3 97 32.0
Nitab4.5_0003622g0050 Nicotiana tabacum HOM05D000085 ORTHO05D009791 8.2e-06 54.3 45 51.1


User provided reference genes

Program Settings