Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0026502 Camellia sinensis var. sinensis HOM05D005427 ORTHO05D006461 1.3e-126 456.4 233 100.0
CSS0032221 Camellia sinensis var. sinensis HOM05D005427 ORTHO05D006461 3.0e-104 382.1 231 83.5
CSS0024088 Camellia sinensis var. sinensis HOM05D005427 ORTHO05D006461 2.6e-103 379.0 231 83.1
Rhsim07G0122400 Rhododendron simsii HOM05D005427 ORTHO05D006461 1.6e-84 316.6 241 67.6
GSVIVG01017423001 Vitis vinifera HOM05D005427 ORTHO05D006461 3.4e-79 298.9 236 64.8
TAR628G1492 Trochodendron aralioides HOM05D001631 ORTHO05D001591 7.6e-79 297.7 233 64.4
Dinv36993 Davidia involucrata HOM05D005427 ORTHO05D006461 2.7e-76 289.3 233 65.7
Atru.chr3.1127 Acer truncatum HOM05D005427 ORTHO05D006461 2.4e-72 276.2 233 61.4
Atru.chr3.1136 Acer truncatum HOM05D005427 ORTHO05D006461 2.4e-72 276.2 233 61.4
Dinv21205 Davidia involucrata HOM05D005427 ORTHO05D006461 2.6e-71 272.7 233 63.5
QL06p037683 Quercus lobata HOM05D005427 ORTHO05D006461 1.7e-70 270.0 235 57.9
vmacro07282 Vaccinium macrocarpon HOM05D005427 ORTHO05D006461 4.2e-69 265.4 233 60.5
Nn1g05775 Nelumbo nucifera HOM05D005427 ORTHO05D006461 5.4e-69 265.0 229 56.3
Prupe.6G211100 Prunus persica HOM05D005427 ORTHO05D006461 1.6e-68 263.5 227 58.6
Potri.017G091300 Populus trichocarpa HOM05D005427 ORTHO05D006461 6.0e-68 261.5 233 57.5
Ciclev10026408m.g Citrus clementina HOM05D005427 ORTHO05D006461 1.7e-67 260.0 233 59.2
vmacro05473 Vaccinium macrocarpon HOM05D005427 ORTHO05D006461 3.0e-67 259.2 262 55.7
MD15G1405500 Malus domestica HOM05D005427 ORTHO05D006461 5.1e-67 258.5 223 60.5
TWI74G0676 Tripterygium wilfordii HOM05D005427 ORTHO05D006461 1.3e-65 253.8 223 58.7
PGR102G2470 Punica granatum HOM05D005427 ORTHO05D006461 3.6e-65 252.3 231 53.7
CiPaw.08G147100 Carya illinoinensis HOM05D005427 ORTHO05D006461 1.8e-64 250.0 233 57.1
Thecc.01G082100 Theobroma cacao HOM05D005427 ORTHO05D006461 1.8e-64 250.0 234 56.8
Gohir.A11G206966 Gossypium hirsutum HOM05D005427 ORTHO05D006461 2.4e-64 249.6 230 57.4
TAR376G0349 Trochodendron aralioides HOM05D005427 ORTHO05D006461 5.3e-64 248.4 233 55.8
Migut.F01758 Erythranthe guttata HOM05D005427 ORTHO05D006461 6.9e-64 248.1 232 56.5
Gorai.007G232600 Gossypium raimondii HOM05D005427 ORTHO05D006461 1.2e-63 247.3 230 56.5
Manes.13G105100 Manihot esculenta HOM05D005427 ORTHO05D006461 7.6e-63 244.6 231 58.0
RcHm_v2.0_Chr2g0109701 Rosa chinensis HOM05D005427 ORTHO05D006461 8.4e-62 241.1 222 55.9
Sopen09g003480 Solanum pennellii HOM05D005427 ORTHO05D006461 9.3e-61 237.7 231 53.7
Aqoxy3G03178 Aquilegia oxysepala HOM05D005427 ORTHO05D006461 2.1e-60 236.5 231 52.4
FvH4_1g18830 Fragaria vesca HOM05D005427 ORTHO05D006461 2.7e-60 236.1 222 53.2
Solyc09g008680.4 Solanum lycopersicum HOM05D005427 ORTHO05D006461 2.7e-60 236.1 231 53.7
COL.COLO4_11665 Corchorus olitorius HOM05D005427 ORTHO05D006461 4.6e-60 235.3 232 53.9
PGSC0003DMG400012980 Solanum tuberosum HOM05D005427 ORTHO05D006461 6.0e-60 235.0 231 52.8
Gohir.D11G216500 Gossypium hirsutum HOM05D005427 ORTHO05D006461 7.4e-58 228.0 209 56.5
FAN23G0196 Fragaria x ananassa HOM05D005427 ORTHO05D006461 6.2e-57 224.9 238 50.4
Cfa001616 Carpinus fangiana HOM05D005427 ORTHO05D006461 1.8e-56 223.4 233 50.6
Eucgr.H02348 Eucalyptus grandis HOM05D005427 ORTHO05D006461 1.2e-55 220.7 220 50.9
RcHm_v2.0_Chr5g0054161 Rosa chinensis HOM05D005427 ORTHO05D006461 2.0e-55 219.9 222 52.7
THA.LOC104819282 Tarenaya hassleriana HOM05D005427 ORTHO05D006461 3.4e-55 219.2 233 50.2
SGA_v2.0_scaffold70G23436 Striga asiatica HOM05D005427 ORTHO05D006461 2.9e-54 216.1 224 51.3
Cpa.g.sc3.369 Carica papaya HOM05D005427 ORTHO05D006461 6.4e-54 214.9 233 48.9
FAN19G1732 Fragaria x ananassa HOM05D005427 ORTHO05D006461 2.4e-53 213.0 251 46.2
CAN.G1830.8 Capsicum annuum HOM05D005427 ORTHO05D006461 7.1e-53 211.5 224 50.0
SGA_v2.0_scaffold147G36350 Striga asiatica HOM05D005427 ORTHO05D006461 7.1e-53 211.5 222 50.9
Phvul.003G285200 Phaseolus vulgaris HOM05D005427 ORTHO05D006461 1.2e-52 210.7 232 49.6
CANSAT01G2304 Cannabis sativa HOM05D005427 ORTHO05D006461 1.6e-52 210.3 231 48.9
Lalb_Chr04g0263231 Lupinus albus HOM05D005427 ORTHO05D006461 1.6e-52 210.3 231 47.6
SGA_v2.0_scaffold4G02171 Striga asiatica HOM05D005427 ORTHO05D006461 2.1e-52 209.9 222 50.9
ECA233G5189 Erigeron canadensis HOM05D005427 ORTHO05D006461 2.7e-52 209.5 231 50.2
Nitab4.5_0004281g0090 Nicotiana tabacum HOM05D005427 ORTHO05D006461 3.5e-52 209.1 232 48.7
ClCG09G016510 Citrullus lanatus HOM05D005427 ORTHO05D006461 3.9e-51 205.7 221 47.5
Phvul.003G285800 Phaseolus vulgaris HOM05D005427 ORTHO05D006461 8.7e-51 204.5 233 49.4
PSO761G0697 Papaver somniferum HOM05D005427 ORTHO05D006461 2.5e-50 203.0 232 44.0
Duzib264G0001 Durio zibethinus HOM05D005427 ORTHO05D006461 3.3e-50 202.6 191 55.0
CsaV3_7G007450 Cucumis sativus L. HOM05D005427 ORTHO05D006461 4.3e-50 202.2 221 46.6
AT3G49645 Arabidopsis thaliana HOM05D005427 ORTHO05D006461 2.1e-49 199.9 232 47.8
Lj3g0020172 Lotus japonicus HOM05D005427 ORTHO05D006461 3.7e-49 199.1 242 46.3
AL7G47510 Arabidopsis lyrata HOM05D005427 ORTHO05D006461 8.2e-49 198.0 232 47.4
Carub.0005s1599 Capsella rubella HOM05D005427 ORTHO05D006461 8.2e-49 198.0 222 46.8
CDE02G2678 Ceratophyllum demersum HOM05D005427 ORTHO05D006160 4.0e-48 195.7 230 46.5
DCAR_006436 Daucus carota HOM05D005427 ORTHO05D006461 4.0e-48 195.7 229 49.8
HanXRQChr12g0368771 Helianthus annuus HOM05D005427 ORTHO05D006461 5.3e-48 195.3 208 51.9
MELO3C018556.2 Cucumis melo HOM05D005427 ORTHO05D006461 9.0e-48 194.5 231 45.0
Glyma.08G273000 Glycine max HOM05D005427 ORTHO05D006461 9.0e-48 194.5 237 46.0
Hma1.2p1_0561F.1_g178960 Hydrangea macrophylla HOM05D005427 ORTHO05D006461 9.0e-48 194.5 157 66.2
Sed0018601 Sechium edule HOM05D005427 ORTHO05D006461 2.0e-47 193.4 220 44.1
THA.LOC104799739 Tarenaya hassleriana HOM05D005427 ORTHO05D006461 2.2e-46 189.9 230 44.8
EL10Ac9g20957 Beta vulgaris HOM05D005427 ORTHO05D006461 4.9e-46 188.7 220 48.6
Thhalv10010700m.g Eutrema salsugineum HOM05D005427 ORTHO05D006461 6.5e-46 188.3 222 46.8
Ah.01g015840 Amaranthus hybridus HOM05D005427 ORTHO05D006461 8.4e-46 188.0 228 47.8
AUR62041740 Chenopodium quinoa HOM05D005427 ORTHO05D006461 1.4e-45 187.2 222 49.1
Hund15020 Selenicereus undatus HOM05D005427 ORTHO05D006461 5.5e-45 185.3 231 44.6
Aa31LG4G18120 Aethionema arabicum HOM05D005427 ORTHO05D006461 7.1e-45 184.9 225 44.9
Thhalv10019696m.g Eutrema salsugineum HOM05D005427 ORTHO05D006461 9.3e-45 184.5 222 46.4
MD01G1046300 Malus domestica HOM05D005427 ORTHO05D006461 9.3e-45 184.5 180 55.6
Peaxi162Scf00500g00116 Petunia axillaris HOM05D005427 ORTHO05D006461 3.5e-44 182.6 205 47.8
TPR.G15264 Trifolium pratense HOM05D005427 ORTHO05D006461 1.8e-43 180.3 242 43.4
Sp5g12450 Schrenkiella parvula HOM05D005427 ORTHO05D006461 2.3e-43 179.9 222 44.1
Sc06g0009050 Simmondsia chinensis HOM05D005427 ORTHO05D006461 2.3e-43 179.9 229 45.9
CARHR158680 Cardamine hirsuta HOM05D005427 ORTHO05D006461 3.0e-43 179.5 222 43.2
Peaxi162Scf01051g00142 Petunia axillaris HOM05D005427 ORTHO05D006461 3.0e-43 179.5 222 45.0
Hund13132 Selenicereus undatus HOM05D005427 ORTHO05D006461 3.9e-43 179.1 231 44.2
Ah.01g003640 Amaranthus hybridus HOM05D000109 ORTHO05D000520 5.1e-43 178.7 221 43.4
AUR62024067 Chenopodium quinoa HOM05D005427 ORTHO05D006461 6.7e-43 178.3 220 47.7
A06p28350 Brassica napus HOM05D005427 ORTHO05D006461 1.1e-42 177.6 230 42.2
BraA06t25777Z Brassica rapa HOM05D005427 ORTHO05D006461 1.1e-42 177.6 230 42.2
arahy.Tifrunner.gnm1.ann1.Y2QWLJ Arachis hypogaea HOM05D006058 ORTHO05D007686 1.5e-42 177.2 285 40.0
AL5G29490 Arabidopsis lyrata HOM05D007023 ORTHO05D008684 1.9e-42 176.8 218 45.9
BraA07t29893Z Brassica rapa HOM05D005427 ORTHO05D006461 1.9e-42 176.8 230 41.7
BcaC01g02424 Brassica carinata HOM05D005427 ORTHO05D006461 4.3e-42 175.6 222 42.8
PSO210G5957 Papaver somniferum HOM05D005427 ORTHO05D006461 4.3e-42 175.6 229 41.0
C03p65440 Brassica napus HOM05D005427 ORTHO05D006461 5.7e-42 175.3 230 41.7
BolC3t18796H Brassica oleracea HOM05D005427 ORTHO05D006461 5.7e-42 175.3 230 41.7
arahy.Tifrunner.gnm1.ann1.SHER6S Arachis hypogaea HOM05D006058 ORTHO05D007686 9.7e-42 174.5 254 43.3
BcaB01g00686 Brassica carinata HOM05D005427 ORTHO05D006461 1.6e-41 173.7 222 41.9
AUR62012052 Chenopodium quinoa HOM05D005427 ORTHO05D006461 2.2e-41 173.3 222 47.3
Haze_16903 Corylus avellana HOM05D005427 ORTHO05D006461 1.4e-40 170.6 254 41.3
AUR62019836 Chenopodium quinoa HOM05D005427 ORTHO05D006461 4.1e-40 169.1 229 42.8
Hund00873 Selenicereus undatus HOM05D005427 ORTHO05D006461 1.5e-39 167.2 211 43.1
A07p22100 Brassica napus HOM05D005427 ORTHO05D006461 2.6e-39 166.4 250 38.8
Psat4g120800 Pisum sativum HOM05D005427 ORTHO05D006461 3.4e-39 166.0 244 39.8
BraA06t24896Z Brassica rapa HOM05D007023 ORTHO05D008684 1.7e-38 163.7 214 41.6
Glyma.20G162400 Glycine max HOM05D005427 ORTHO05D006461 2.9e-38 162.9 238 39.5
BcaC07g39428 Brassica carinata HOM05D005427 ORTHO05D006461 1.4e-37 160.6 222 41.0
Zm00001eb210960 Zea mays HOM05D005427 ORTHO05D006461 1.6e-36 157.1 221 38.5
Lsat_1_v5_gn_8_18901 Lactuca sativa HOM05D005427 ORTHO05D006461 1.0e-35 154.5 247 40.9
FAN27G1155 Fragaria x ananassa HOM05D005427 ORTHO05D006461 1.3e-35 154.1 221 41.2
CSS0003252 Camellia sinensis var. sinensis HOM05D005427 ORTHO05D006461 1.8e-35 153.7 78 98.7
Os10g0360900 Oryza sativa ssp. japonica HOM05D005427 ORTHO05D006461 3.0e-35 152.9 222 36.0
Zm00001eb064010 Zea mays HOM05D005427 ORTHO05D006461 1.1e-34 151.0 250 36.4
HPP92_024834 Vanilla planifolia HOM05D005427 ORTHO05D006461 3.3e-34 149.4 228 36.8
HPP92_026626 Vanilla planifolia HOM05D005427 ORTHO05D006461 3.3e-34 149.4 228 36.8
Actinidia11934 Actinidia chinensis HOM05D005427 ORTHO05D006461 5.7e-34 148.7 123 64.2
Phvul.002G065300 Phaseolus vulgaris HOM05D005427 ORTHO05D006461 1.3e-33 147.5 175 45.7
Medtr8g067265 Medicago truncatula HOM05D005427 ORTHO05D006461 3.7e-33 146.0 218 39.4
C08p24660 Brassica napus HOM05D007023 ORTHO05D008684 4.8e-33 145.6 208 41.3
BolC8t50081H Brassica oleracea HOM05D007023 ORTHO05D008684 4.8e-33 145.6 208 41.3
Sabra17G0080400 Salix brachista HOM05D005427 ORTHO05D006461 1.8e-32 143.7 206 43.7
BcaB02g09598 Brassica carinata HOM05D005427 ORTHO05D006461 3.4e-31 139.4 223 37.2
FAN26G2664 Fragaria x ananassa HOM05D005427 ORTHO05D006461 4.5e-31 139.0 227 39.2
A06p18060 Brassica napus HOM05D007023 ORTHO05D008684 1.3e-30 137.5 213 37.1
Cc09_g03000 Coffea canephora HOM05D005427 ORTHO05D006461 2.9e-30 136.3 134 54.5
TWI77G0140 Tripterygium wilfordii HOM05D005427 ORTHO05D006461 2.9e-30 136.3 117 54.7
Os07g0264900 Oryza sativa ssp. japonica HOM05D005427 ORTHO05D006461 4.8e-25 119.0 180 35.6
AagrBONN_evm.TU.Sc2ySwM_228.2937 Anthoceros agrestis HOM05D005427 ORTHO05D006461 2.4e-24 116.7 212 33.0
Pp3c24_9930 Physcomitrium patens HOM05D005427 ORTHO05D006461 2.4e-24 116.7 221 28.5
Nitab4.5_0006709g0040 Nicotiana tabacum HOM05D005427 ORTHO05D006461 4.1e-24 115.9 81 65.4
EL10Ac6g13479 Beta vulgaris HOM05D005427 ORTHO05D006461 5.3e-24 115.5 184 38.6
Cc09_g02990 Coffea canephora HOM05D005427 ORTHO05D006461 1.5e-23 114.0 91 61.5
Rhsim10G0082400 Rhododendron simsii HOM05D005427 ORTHO05D006461 5.0e-22 109.0 76 68.4
VMungo1309G2225 Vigna mungo HOM05D005427 ORTHO05D006461 5.5e-21 105.5 138 45.7
Carub.0005s0959 Capsella rubella HOM05D005427 ORTHO05D006461 3.9e-19 99.4 127 45.7
MSTRG.375 Avicennia marina HOM05D005427 ORTHO05D006461 8.8e-19 98.2 82 56.1
MD00G1139600 Malus domestica HOM05D005427 ORTHO05D006461 8.8e-19 98.2 58 82.8
MD04G1240700 Malus domestica HOM05D005427 ORTHO05D006461 8.8e-19 98.2 58 82.8
MBI16_g14676_MAGBIO Magnolia biondii HOM05D005427 ORTHO05D006461 1.5e-18 97.4 164 36.0
Ah.16g109230 Amaranthus hybridus HOM05D005427 ORTHO05D006461 2.6e-18 96.7 111 42.3
SMO367G1008 Selaginella moellendorffii HOM05D005427 ORTHO05D006461 5.7e-18 95.5 182 31.3
SalBow7G4264 Salvia bowleyana HOM05D005427 ORTHO05D006461 1.7e-17 94.0 101 48.5
MBI16_g26727_MAGBIO Magnolia biondii HOM05D005427 ORTHO05D006461 2.0e-15 87.0 89 51.7
Mapoly0002s0147 Marchantia polymorpha HOM05D005427 ORTHO05D006461 6.7e-11 72.0 229 27.1
Lsat_1_v5_gn_7_80981 Lactuca sativa HOM05D005427 ORTHO05D006461 1.5e-10 70.9 62 61.3
Mapoly0085s0034 Marchantia polymorpha HOM05D005427 ORTHO05D006461 3.3e-10 69.7 214 26.6
Mapoly0028s0128 Marchantia polymorpha HOM05D005427 ORTHO05D006461 2.8e-09 66.6 221 26.7
SEGI_00262 Sequoiadendron giganteum HOM05D005427 ORTHO05D006461 4.8e-09 65.9 91 35.2
AagrBONN_evm.TU.Sc2ySwM_344.3300 Anthoceros agrestis HOM05D005427 ORTHO05D006461 2.4e-08 63.5 129 33.3
Actinidia12203 Actinidia chinensis HOM05D005427 ORTHO05D006461 5.0e-06 55.8 64 46.9


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