Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0026498 Camellia sinensis var. sinensis HOM05D006074 ORTHO05D008728 9.2e-226 786.6 398 100.0
CSS0024892 Camellia sinensis var. sinensis HOM05D006074 ORTHO05D008728 4.9e-219 764.2 397 98.2
CSS0037615 Camellia sinensis var. sinensis HOM05D006074 ORTHO05D008728 9.2e-194 680.2 404 86.9
CSS0026374 Camellia sinensis var. sinensis HOM05D006074 ORTHO05D008728 1.7e-184 649.4 365 92.6
Actinidia02708 Actinidia chinensis HOM05D006074 ORTHO05D008728 9.0e-181 637.1 397 84.9
vmacro18203 Vaccinium macrocarpon HOM05D006074 ORTHO05D008728 4.0e-173 611.7 391 81.6
Rhsim08G0067900 Rhododendron simsii HOM05D006074 ORTHO05D008728 2.6e-172 609.0 392 81.4
Dinv33738 Davidia involucrata HOM05D006074 ORTHO05D008728 2.2e-163 579.3 399 76.2
Hma1.2p1_0449F.1_g155300 Hydrangea macrophylla HOM05D006074 ORTHO05D008728 2.2e-163 579.3 361 80.9
TAR729G0002 Trochodendron aralioides HOM05D006074 ORTHO05D008728 1.1e-159 567.0 391 74.4
Oeu060929.1 Olea europaea HOM05D006074 ORTHO05D008728 7.4e-159 564.3 398 73.1
Lju41C23G10 Lonicera japonica HOM05D006074 ORTHO05D008728 9.7e-159 563.9 397 75.8
TAR622G0709 Trochodendron aralioides HOM05D006074 ORTHO05D008728 4.8e-158 561.6 365 77.8
FAN02G2663 Fragaria x ananassa HOM05D006074 ORTHO05D008728 8.2e-158 560.8 393 74.3
GSVIVG01011374001 Vitis vinifera HOM05D006074 ORTHO05D008728 2.4e-157 559.3 406 72.2
QL02p081203 Quercus lobata HOM05D006074 ORTHO05D008728 5.3e-157 558.1 389 73.8
RcHm_v2.0_Chr2g0168871 Rosa chinensis HOM05D006074 ORTHO05D008728 2.9e-155 552.4 393 73.3
MBI02_g10680_MAGBIO Magnolia biondii HOM05D006074 ORTHO05D008728 8.5e-155 550.8 371 74.7
MD09G1048800 Malus domestica HOM05D006074 ORTHO05D008728 1.1e-154 550.4 395 71.1
FvH4_6g49080 Fragaria vesca HOM05D006074 ORTHO05D008728 3.2e-154 548.9 374 75.4
Potri.017G080300 Populus trichocarpa HOM05D006074 ORTHO05D008728 5.5e-154 548.1 394 72.6
Migut.H00904 Erythranthe guttata HOM05D006074 ORTHO05D008728 1.2e-153 547.0 380 73.2
CiPaw.03G029000 Carya illinoinensis HOM05D006074 ORTHO05D008728 4.6e-153 545.0 362 76.0
Sabra17G0072000 Salix brachista HOM05D006074 ORTHO05D008728 4.6e-153 545.0 392 72.2
Prupe.3G270100 Prunus persica HOM05D006074 ORTHO05D008728 1.8e-152 543.1 376 73.7
Psat1g075640 Pisum sativum HOM05D006074 ORTHO05D008728 3.0e-152 542.3 375 74.9
Medtr1g039990 Medicago truncatula HOM05D006074 ORTHO05D008728 5.1e-152 541.6 368 75.5
CAN.G579.8 Capsicum annuum HOM05D006074 ORTHO05D008728 6.7e-152 541.2 391 70.8
PSO832G2479 Papaver somniferum HOM05D006074 ORTHO05D008728 1.1e-151 540.4 376 72.6
Aqoxy3G03321 Aquilegia oxysepala HOM05D006074 ORTHO05D008728 2.5e-151 539.3 376 72.9
Lj2g0007765 Lotus japonicus HOM05D006074 ORTHO05D008728 1.3e-150 537.0 382 72.3
ClCG10G014940 Citrullus lanatus HOM05D006074 ORTHO05D008728 3.7e-150 535.4 368 74.2
Duzib187G1598 Durio zibethinus HOM05D006074 ORTHO05D008728 1.4e-149 533.5 376 72.3
Phvul.004G027100 Phaseolus vulgaris HOM05D006074 ORTHO05D008728 1.8e-149 533.1 352 77.6
Thecc.04G099800 Theobroma cacao HOM05D006074 ORTHO05D008728 3.1e-149 532.3 376 72.1
Sopen03g012680 Solanum pennellii HOM05D006074 ORTHO05D008728 9.1e-149 530.8 365 73.7
Lalb_Chr21g0318901 Lupinus albus HOM05D006074 ORTHO05D008728 1.5e-148 530.0 374 72.5
CsaV3_3G041590 Cucumis sativus L. HOM05D006074 ORTHO05D008728 2.0e-148 529.6 368 73.4
PSO591G0110 Papaver somniferum HOM05D006074 ORTHO05D008728 3.4e-148 528.9 381 70.6
Solyc03g058860.3 Solanum lycopersicum HOM05D006074 ORTHO05D008728 1.7e-147 526.6 370 72.4
arahy.Tifrunner.gnm1.ann1.V4TPJI Arachis hypogaea HOM05D006074 ORTHO05D008728 2.2e-147 526.2 372 72.6
SalBow1G4287 Salvia bowleyana HOM05D006074 ORTHO05D008728 2.2e-147 526.2 394 68.3
PGSC0003DMG400009217 Solanum tuberosum HOM05D006074 ORTHO05D008728 5.0e-147 525.0 371 71.7
arahy.Tifrunner.gnm1.ann1.1Y4ZQN Arachis hypogaea HOM05D006074 ORTHO05D008728 1.9e-146 523.1 360 74.7
HanXRQChr09g0265461 Helianthus annuus HOM05D006074 ORTHO05D008728 7.2e-146 521.2 374 71.4
Lsat_1_v5_gn_4_177200 Lactuca sativa HOM05D006074 ORTHO05D008728 9.4e-146 520.8 355 75.2
ATR0564G024 Amborella trichopoda HOM05D006074 ORTHO05D008728 1.6e-145 520.0 372 71.5
Gohir.A07G215200 Gossypium hirsutum HOM05D006074 ORTHO05D008728 2.1e-145 519.6 377 70.0
MELO3C009883.2 Cucumis melo HOM05D006074 ORTHO05D008728 4.7e-145 518.5 352 74.7
Cc07_g03180 Coffea canephora HOM05D006074 ORTHO05D008728 2.0e-143 513.1 362 74.3
VMungo0464G0585 Vigna mungo HOM05D006074 ORTHO05D008728 2.0e-143 513.1 360 73.9
PGR083G0972 Punica granatum HOM05D006074 ORTHO05D008728 6.3e-142 508.1 370 71.4
Gorai.001G256400 Gossypium raimondii HOM05D006074 ORTHO05D008728 8.2e-142 507.7 411 64.5
COL.COLO4_36112 Corchorus olitorius HOM05D006074 ORTHO05D008728 1.8e-141 506.5 363 73.6
CANSAT64G1183 Cannabis sativa HOM05D006074 ORTHO05D008728 4.1e-141 505.4 362 71.5
CANSAT64G2140 Cannabis sativa HOM05D006074 ORTHO05D008728 1.5e-140 503.4 362 72.1
Sc14g0005980 Simmondsia chinensis HOM05D006074 ORTHO05D008728 2.0e-140 503.1 361 72.3
Eucgr.J01218 Eucalyptus grandis HOM05D006074 ORTHO05D008728 2.6e-140 502.7 368 71.2
THA.LOC104823933 Tarenaya hassleriana HOM05D006074 ORTHO05D008728 3.5e-140 502.3 394 65.5
DCAR_021653 Daucus carota HOM05D006074 ORTHO05D008728 5.9e-140 501.5 361 71.2
Gohir.D07G222100 Gossypium hirsutum HOM05D006074 ORTHO05D008728 5.9e-140 501.5 377 68.4
Cpa.g.sc14.19 Carica papaya HOM05D006074 ORTHO05D008728 7.7e-140 501.1 418 64.1
TWI34G1337 Tripterygium wilfordii HOM05D006074 ORTHO05D008728 1.0e-139 500.7 404 65.6
Sed0009974 Sechium edule HOM05D006074 ORTHO05D008728 1.7e-139 500.0 383 66.6
EL10Ac2g02949 Beta vulgaris HOM05D006074 ORTHO05D008728 2.5e-138 496.1 371 67.4
ECA232G4667 Erigeron canadensis HOM05D006074 ORTHO05D008728 2.7e-137 492.7 346 73.7
AT3G28760 Arabidopsis thaliana HOM05D006074 ORTHO05D008728 4.7e-137 491.9 392 65.1
Aa31LG2G4460 Aethionema arabicum HOM05D006074 ORTHO05D008728 8.0e-137 491.1 394 62.9
Atru.BG.207.p Acer truncatum HOM05D006074 ORTHO05D008728 1.0e-136 490.7 350 72.3
BcaC06g30896 Brassica carinata HOM05D006074 ORTHO05D008728 3.0e-136 489.2 365 67.4
Nitab4.5_0003081g0050 Nicotiana tabacum HOM05D006074 ORTHO05D008728 6.7e-136 488.0 345 72.5
Sp2g17410 Schrenkiella parvula HOM05D006074 ORTHO05D008728 6.7e-136 488.0 371 66.6
AUR62038861 Chenopodium quinoa HOM05D006074 ORTHO05D008728 8.8e-136 487.6 400 65.5
Nitab4.5_0000002g0350 Nicotiana tabacum HOM05D006074 ORTHO05D008728 1.1e-135 487.3 352 70.2
AUR62031615 Chenopodium quinoa HOM05D006074 ORTHO05D008728 3.3e-135 485.7 400 65.5
A06p40350 Brassica napus HOM05D006074 ORTHO05D008728 5.7e-135 485.0 371 65.2
BraA06t26953Z Brassica rapa HOM05D006074 ORTHO05D008728 5.7e-135 485.0 371 65.2
C07p37700 Brassica napus HOM05D006074 ORTHO05D008728 9.7e-135 484.2 365 66.6
BolC7t44287H Brassica oleracea HOM05D006074 ORTHO05D008728 1.3e-134 483.8 365 66.3
Nn4g23084 Nelumbo nucifera HOM05D006074 ORTHO05D008728 1.7e-134 483.4 345 71.3
AL5G18490 Arabidopsis lyrata HOM05D006074 ORTHO05D008728 1.1e-133 480.7 369 66.4
Carub.0005s0731 Capsella rubella HOM05D006074 ORTHO05D008728 1.1e-133 480.7 367 66.8
BcaC06g33639 Brassica carinata HOM05D006074 ORTHO05D008728 5.3e-133 478.4 365 66.0
Hund15626 Selenicereus undatus HOM05D006074 ORTHO05D008728 2.0e-132 476.5 357 70.3
Glyma.19G020800 Glycine max HOM05D006074 ORTHO05D008728 4.5e-132 475.3 367 67.8
Os03g0170300 Oryza sativa ssp. japonica HOM05D006074 ORTHO05D008728 4.5e-132 475.3 368 67.1
Peaxi162Scf00451g00822 Petunia axillaris HOM05D006074 ORTHO05D008728 3.8e-131 472.2 399 64.2
TPR.G10370 Trifolium pratense HOM05D006074 ORTHO05D008728 7.2e-130 468.0 313 76.4
Zm00001eb402270 Zea mays HOM05D006074 ORTHO05D008728 2.2e-126 456.4 354 66.9
Ca_04272_v3 Cicer arietinum L. HOM05D006074 ORTHO05D008728 6.3e-126 454.9 321 74.1
SGA_v2.0_scaffold59G20672 Striga asiatica HOM05D006074 ORTHO05D008728 1.4e-125 453.8 316 71.8
Manes.15G177000 Manihot esculenta HOM05D006074 ORTHO05D008728 4.4e-119 432.2 271 77.9
Thhalv10004593m.g Eutrema salsugineum HOM05D006074 ORTHO05D008728 1.0e-112 411.0 325 64.6
AagrBONN_evm.TU.Sc2ySwM_228.462 Anthoceros agrestis HOM05D006074 ORTHO05D008728 3.2e-109 399.4 360 56.9
Pp3c9_19570 Physcomitrium patens HOM05D006074 ORTHO05D008728 2.9e-107 392.9 352 56.2
Pp3c10_1080 Physcomitrium patens HOM05D006074 ORTHO05D008728 1.4e-104 384.0 357 54.9
Mapoly0005s0075 Marchantia polymorpha HOM05D006074 ORTHO05D008728 8.1e-97 358.2 361 52.6
FAN14G0759 Fragaria x ananassa HOM05D006074 ORTHO05D008728 2.8e-89 333.2 398 52.5
unitig_21.g20922 Utricularia gibba HOM05D006074 ORTHO05D008728 6.2e-89 332.0 264 61.7
CDE02G2631 Ceratophyllum demersum HOM05D006074 ORTHO05D008728 9.2e-85 318.2 264 61.0
Glyma.13G064100 Glycine max HOM05D006074 ORTHO05D008728 4.3e-82 309.3 258 66.7
Pp3c15_19890 Physcomitrium patens HOM05D006074 ORTHO05D008728 2.8e-81 306.6 360 47.2
Ciclev10012867m.g Citrus clementina HOM05D006074 ORTHO05D008728 7.1e-77 292.0 186 80.6
Lsat_1_v5_gn_4_177220 Lactuca sativa HOM05D006074 ORTHO05D008728 1.4e-69 267.7 179 77.1
Pp3c1_20750 Physcomitrium patens HOM05D006074 ORTHO05D020966 4.6e-68 262.7 411 38.7
Pp3c1_20753 Physcomitrium patens HOM05D006074 ORTHO05D020966 4.6e-68 262.7 411 38.7
SEGI_14685 Sequoiadendron giganteum HOM05D006074 ORTHO05D008728 3.9e-67 259.6 183 68.3
MCO08G127 Micromonas commoda HOM05D006074 ORTHO05D008728 1.9e-66 257.3 362 42.3
Pp3c2_18540 Physcomitrium patens HOM05D006074 ORTHO05D020966 1.9e-66 257.3 411 37.5
CARHR151760 Cardamine hirsuta HOM05D006074 ORTHO05D008728 9.6e-58 228.4 249 50.2
Pp3c10_2120 Physcomitrium patens HOM05D006074 ORTHO05D020966 2.9e-54 216.9 517 29.6
Cre05.g248250 Chlamydomonas reinhardtii HOM05D006074 ORTHO05D008728 4.9e-54 216.1 344 42.2
Haze_18216 Corylus avellana HOM05D000132 ORTHO05D000058 2.9e-46 190.3 204 54.4
PRCOL_00003957 Prasinoderma coloniale HOM05D006074 ORTHO05D008728 1.4e-45 188.0 364 37.9
Lsat_1_v5_gn_0_26800 Lactuca sativa HOM05D006074 ORTHO05D008728 1.1e-40 171.8 156 57.1
Lsat_1_v5_gn_3_53141 Lactuca sativa HOM05D006074 ORTHO05D008728 1.1e-34 151.8 115 64.3
Actinidia17537 Actinidia chinensis HOM05D006074 ORTHO05D026256 5.0e-22 109.8 68 80.9
Sabra17G0081400 Salix brachista HOM05D006074 ORTHO05D008728 1.2e-20 105.1 71 76.1
Atru.chr3.96 Acer truncatum HOM05D006074 ORTHO05D026256 2.0e-18 97.8 70 72.9
Pp3c20_4730 Physcomitrium patens HOM05D006074 ORTHO05D026055 3.7e-17 93.6 165 38.8
PGSC0003DMG400013970 Solanum tuberosum HOM05D006074 ORTHO05D008728 1.1e-16 92.0 61 65.6
Pp3c23_20410 Physcomitrium patens HOM05D006074 ORTHO05D026055 1.6e-15 88.2 166 35.5
Pp3c8_20190 Physcomitrium patens HOM05D006074 ORTHO05D026055 3.5e-15 87.0 178 33.7
CDE02G1972 Ceratophyllum demersum HOM05D006074 ORTHO05D026256 2.2e-14 84.3 66 66.7
Pp3c20_10280 Physcomitrium patens HOM05D006074 ORTHO05D026055 1.9e-13 81.3 172 30.8
HanXRQChr09g0253281 Helianthus annuus HOM05D006074 ORTHO05D008728 3.0e-11 73.9 53 73.6


User provided reference genes

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