Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0026485 Camellia sinensis var. sinensis HOM05D005888 ORTHO05D007791 2.6e-138 495.4 246 100.0
vmacro05950 Vaccinium macrocarpon HOM05D005888 ORTHO05D007791 3.3e-93 345.5 211 76.3
Actinidia05914 Actinidia chinensis HOM05D005888 ORTHO05D007791 6.3e-92 341.3 262 69.8
Dinv33348 Davidia involucrata HOM05D005888 ORTHO05D007791 3.5e-90 335.5 256 69.5
Hma1.2p1_0279F.1_g112650 Hydrangea macrophylla HOM05D005888 ORTHO05D007791 7.7e-90 334.3 212 74.5
Rhsim10G0007200 Rhododendron simsii HOM05D005888 ORTHO05D007791 1.3e-89 333.6 217 73.7
QL02p071659 Quercus lobata HOM05D005888 ORTHO05D007791 1.2e-87 327.0 228 70.2
Lju41C52T2 Lonicera japonica HOM05D005888 ORTHO05D007791 2.1e-87 326.2 236 67.8
GSVIVG01033109001 Vitis vinifera HOM05D005888 ORTHO05D007791 2.6e-85 319.3 242 66.5
VMungo1383G0786 Vigna mungo HOM05D005888 ORTHO05D007791 9.7e-85 317.4 247 64.0
arahy.Tifrunner.gnm1.ann1.269ICV Arachis hypogaea HOM05D005888 ORTHO05D007791 1.3e-84 317.0 211 71.6
Glyma.16G057700 Glycine max HOM05D005888 ORTHO05D007791 2.2e-84 316.2 253 66.0
Phvul.001G094800 Phaseolus vulgaris HOM05D005888 ORTHO05D007791 2.8e-84 315.8 241 67.6
Thecc.04G034400 Theobroma cacao HOM05D005888 ORTHO05D007791 2.8e-84 315.8 245 67.3
arahy.Tifrunner.gnm1.ann1.BEVL6N Arachis hypogaea HOM05D005888 ORTHO05D007791 4.8e-84 315.1 211 71.1
Nn4g22357 Nelumbo nucifera HOM05D005888 ORTHO05D007791 4.8e-84 315.1 242 63.2
Gohir.D10G084400 Gossypium hirsutum HOM05D005888 ORTHO05D007791 6.3e-84 314.7 216 69.4
Gorai.011G091800 Gossypium raimondii HOM05D005888 ORTHO05D007791 6.3e-84 314.7 216 69.4
TWI36G1634 Tripterygium wilfordii HOM05D005888 ORTHO05D007791 8.2e-84 314.3 216 70.4
Nitab4.5_0005161g0030 Nicotiana tabacum HOM05D005888 ORTHO05D007791 1.1e-83 313.9 223 67.7
Cpa.g.sc171.27 Carica papaya HOM05D005888 ORTHO05D007791 1.8e-83 313.2 216 69.9
Lalb_Chr22g0360441 Lupinus albus HOM05D005888 ORTHO05D007791 4.1e-83 312.0 213 68.1
Oeu011755.2 Olea europaea HOM05D005888 ORTHO05D007791 4.1e-83 312.0 216 69.9
CiPaw.03G054300 Carya illinoinensis HOM05D005888 ORTHO05D007791 5.3e-83 311.6 216 69.9
MD09G1012500 Malus domestica HOM05D005888 ORTHO05D007791 5.3e-83 311.6 267 60.3
Solyc03g005010.4 Solanum lycopersicum HOM05D005888 ORTHO05D007791 7.0e-83 311.2 212 69.3
Prupe.3G304500 Prunus persica HOM05D005888 ORTHO05D007791 1.6e-82 310.1 265 61.5
HanXRQChr14g0450691 Helianthus annuus HOM05D005888 ORTHO05D007791 2.0e-82 309.7 194 74.2
Cc07_g00720 Coffea canephora HOM05D005888 ORTHO05D007791 3.5e-82 308.9 216 69.0
Sopen03g001020 Solanum pennellii HOM05D005888 ORTHO05D007791 3.5e-82 308.9 212 68.9
RcHm_v2.0_Chr2g0175381 Rosa chinensis HOM05D005888 ORTHO05D007791 5.9e-82 308.1 216 68.1
MSTRG.15566 Avicennia marina HOM05D005888 ORTHO05D007791 1.0e-81 307.4 228 64.0
PGSC0003DMG400013424 Solanum tuberosum HOM05D005888 ORTHO05D007791 1.3e-81 307.0 212 68.4
Ciclev10014957m.g Citrus clementina HOM05D005888 ORTHO05D007791 1.7e-81 306.6 228 66.2
Cfa007240 Carpinus fangiana HOM05D005888 ORTHO05D007791 3.8e-81 305.4 211 70.6
FAN05G3931 Fragaria x ananassa HOM05D005888 ORTHO05D007791 6.5e-81 304.7 213 67.1
Lj1g0026523 Lotus japonicus HOM05D005888 ORTHO05D007791 6.5e-81 304.7 210 67.1
FvH4_6g53250 Fragaria vesca HOM05D005888 ORTHO05D007791 1.9e-80 303.1 211 67.3
Manes.15G159600 Manihot esculenta HOM05D005888 ORTHO05D007791 4.2e-80 302.0 216 68.1
Atru.chr6.2554 Acer truncatum HOM05D005888 ORTHO05D007791 7.2e-80 301.2 216 68.1
EL10Ac5g11325 Beta vulgaris HOM05D005888 ORTHO05D007791 7.2e-80 301.2 213 66.7
Sc03g0006610 Simmondsia chinensis HOM05D005888 ORTHO05D007791 7.2e-80 301.2 216 66.7
Atru.chr6.2546 Acer truncatum HOM05D005888 ORTHO05D007791 9.4e-80 300.8 216 67.6
SalBow7G4553 Salvia bowleyana HOM05D005888 ORTHO05D007791 1.6e-79 300.1 214 67.3
ECA238G1812 Erigeron canadensis HOM05D005888 ORTHO05D001226 2.1e-79 299.7 209 68.9
THA.LOC104823976 Tarenaya hassleriana HOM05D005888 ORTHO05D007791 2.7e-79 299.3 212 67.9
Potri.001G331900 Populus trichocarpa HOM05D005888 ORTHO05D007791 3.6e-79 298.9 238 63.4
DCAR_021782 Daucus carota HOM05D005888 ORTHO05D007791 6.1e-79 298.1 213 65.7
Gohir.A10G159400 Gossypium hirsutum HOM05D005888 ORTHO05D007791 1.0e-78 297.4 206 68.0
Lsat_1_v5_gn_2_94140 Lactuca sativa HOM05D005888 ORTHO05D007791 1.0e-78 297.4 216 66.7
Nitab4.5_0000559g0440 Nicotiana tabacum HOM05D005888 ORTHO05D007791 4.0e-78 295.4 251 59.4
Sed0023439 Sechium edule HOM05D005888 ORTHO05D007791 5.2e-78 295.0 215 65.6
Sabra16G0212900 Salix brachista HOM05D005888 ORTHO05D007791 1.5e-77 293.5 238 61.3
CANSAT64G1138 Cannabis sativa HOM05D005888 ORTHO05D007791 2.6e-77 292.7 211 64.9
MELO3C014874.2 Cucumis melo HOM05D005888 ORTHO05D007791 3.4e-77 292.4 238 60.1
Aqoxy5G03414 Aquilegia oxysepala HOM05D005888 ORTHO05D007791 7.5e-77 291.2 212 66.5
Migut.K01458 Erythranthe guttata HOM05D005888 ORTHO05D007791 7.5e-77 291.2 210 66.2
CsaV3_3G027150 Cucumis sativus L. HOM05D005888 ORTHO05D007791 9.8e-77 290.8 238 59.2
COL.COLO4_17186 Corchorus olitorius HOM05D005888 ORTHO05D007791 1.3e-76 290.4 186 72.0
Medtr7g029350 Medicago truncatula HOM05D005888 ORTHO05D007791 2.8e-76 289.3 213 63.8
Eucgr.J02331 Eucalyptus grandis HOM05D005888 ORTHO05D007791 3.7e-76 288.9 215 65.1
SGA_v2.0_scaffold47G17585 Striga asiatica HOM05D005888 ORTHO05D000781 3.7e-76 288.9 210 67.1
AT3G27180 Arabidopsis thaliana HOM05D005888 ORTHO05D007791 4.8e-76 288.5 242 58.7
PGR083G0577 Punica granatum HOM05D005888 ORTHO05D007791 6.3e-76 288.1 235 61.7
Carub.0005s0545 Capsella rubella HOM05D005888 ORTHO05D007791 1.8e-75 286.6 242 58.3
AL5G16294 Arabidopsis lyrata HOM05D005888 ORTHO05D007791 2.7e-74 282.7 242 57.4
ClCG05G013410 Citrullus lanatus HOM05D005888 ORTHO05D007791 2.7e-74 282.7 215 63.3
Aa31LG2G5450 Aethionema arabicum HOM05D005888 ORTHO05D007791 5.9e-74 281.6 238 58.4
Atru.chr6.2542 Acer truncatum HOM05D005888 ORTHO05D007791 7.7e-74 281.2 279 54.5
Sp2g16300 Schrenkiella parvula HOM05D005888 ORTHO05D007791 1.0e-73 280.8 230 60.0
CARHR148380 Cardamine hirsuta HOM05D005888 ORTHO05D007791 1.7e-73 280.0 213 62.4
A06p41440 Brassica napus HOM05D005888 ORTHO05D007791 5.0e-73 278.5 212 62.7
TPR.G38314 Trifolium pratense HOM05D005888 ORTHO05D007791 5.0e-73 278.5 192 67.2
C07p36200 Brassica napus HOM05D005888 ORTHO05D007791 8.5e-73 277.7 212 62.7
PSO063G1934 Papaver somniferum HOM05D005888 ORTHO05D007791 1.9e-72 276.6 213 63.8
PSO782G2046 Papaver somniferum HOM05D005888 ORTHO05D007791 1.9e-72 276.6 213 63.8
BcaC06g33851 Brassica carinata HOM05D005888 ORTHO05D007791 2.5e-72 276.2 212 62.3
BolC7t44136H Brassica oleracea HOM05D005888 ORTHO05D007791 2.5e-72 276.2 212 62.3
BraA06t27070Z Brassica rapa HOM05D005888 ORTHO05D007791 2.5e-72 276.2 211 62.6
Thhalv10003965m.g Eutrema salsugineum HOM05D005888 ORTHO05D007791 5.2e-70 268.5 241 56.8
CDE05G3258 Ceratophyllum demersum HOM05D005888 ORTHO05D007791 3.4e-69 265.8 252 56.0
ATR0561G016 Amborella trichopoda HOM05D005888 ORTHO05D007791 7.0e-67 258.1 212 60.4
FAN02G1540 Fragaria x ananassa HOM05D005888 ORTHO05D007791 5.9e-66 255.0 246 55.7
AUR62034780 Chenopodium quinoa HOM05D005888 ORTHO05D007791 1.5e-64 250.4 199 61.3
Haze_14860 Corylus avellana HOM05D005888 ORTHO05D007791 2.5e-64 249.6 185 68.1
Peaxi162Scf00700g00115 Petunia axillaris HOM05D005888 ORTHO05D007791 7.3e-64 248.1 167 69.5
FAN14G3555 Fragaria x ananassa HOM05D005888 ORTHO05D007791 9.5e-64 247.7 211 57.3
HPP92_006968 Vanilla planifolia HOM05D005888 ORTHO05D007791 2.1e-63 246.5 214 55.6
Zm00001eb364480 Zea mays HOM05D005888 ORTHO05D007791 9.8e-61 237.7 216 53.2
Psat3g164600 Pisum sativum HOM05D005888 ORTHO05D007791 4.0e-54 215.7 148 70.3
AagrBONN_evm.TU.Sc2ySwM_344.2002 Anthoceros agrestis HOM05D005888 ORTHO05D007791 2.7e-50 203.0 186 50.0
Duzib187G0894 Durio zibethinus HOM05D005888 ORTHO05D007791 3.9e-49 199.1 167 59.9
Mapoly0035s0136 Marchantia polymorpha HOM05D005888 ORTHO05D007791 7.3e-48 194.9 209 46.4
Pp3c10_19430 Physcomitrium patens HOM05D005888 ORTHO05D007791 3.6e-47 192.6 207 45.4
SMO364G0044 Selaginella moellendorffii HOM05D005888 ORTHO05D007791 5.4e-43 178.7 186 44.1
FAN09G0079 Fragaria x ananassa HOM05D000071 ORTHO05D007791 4.6e-42 175.6 139 59.0
Ca_27688_v3 Cicer arietinum L. HOM05D005888 ORTHO05D007791 2.3e-38 163.3 126 61.9
Ca_11801_v3 Cicer arietinum L. HOM05D005888 ORTHO05D007791 4.9e-36 155.6 97 75.3
CBR_g38076 Chara braunii HOM05D005888 ORTHO05D007791 1.5e-32 144.1 143 47.6
Hma1.2p1_0279F.1_g112640 Hydrangea macrophylla HOM05D005888 ORTHO05D007791 2.8e-31 139.8 76 82.9
FAN05G4989 Fragaria x ananassa HOM05D005888 ORTHO05D007791 1.1e-27 127.9 75 78.7
CAN.G1751.4 Capsicum annuum HOM05D005888 ORTHO05D007791 1.0e-25 121.3 73 76.7
AUR62009505 Chenopodium quinoa HOM05D005888 ORTHO05D007791 7.6e-21 105.1 76 65.8
AUR62044347 Chenopodium quinoa HOM05D005888 ORTHO05D007791 7.6e-21 105.1 76 65.8
SEGI_20285 Sequoiadendron giganteum HOM05D005888 ORTHO05D007791 5.4e-19 99.0 74 59.5
TAR374G0091 Trochodendron aralioides HOM05D005888 ORTHO05D007791 4.6e-18 95.9 56 76.8
Ah.11g046710 Amaranthus hybridus HOM05D005888 ORTHO05D007791 8.1e-15 85.1 65 60.0
BcaNung06416 Brassica carinata HOM05D005888 ORTHO05D007791 6.9e-14 82.0 64 56.2
MCO16G034 Micromonas commoda HOM05D005888 ORTHO05D007791 2.6e-13 80.1 228 27.2
Os01g0920300 Oryza sativa ssp. japonica HOM05D005888 ORTHO05D007791 4.5e-13 79.3 52 65.4
MD17G1013100 Malus domestica HOM05D005888 ORTHO05D007791 1.9e-11 73.9 65 52.3
Cre13.g578201 Chlamydomonas reinhardtii HOM05D005888 ORTHO05D007791 1.2e-10 71.2 100 39.0
FAN18G4156 Fragaria x ananassa HOM05D005888 ORTHO05D045398 5.6e-08 62.4 70 48.6
arahy.Tifrunner.gnm1.ann1.3FLP3Q Arachis hypogaea HOM05D005888 ORTHO05D007791 1.4e-06 57.8 36 63.9
PRCOL_00001844 Prasinoderma coloniale HOM05D005888 ORTHO05D007791 9.0e-06 55.1 161 30.4


User provided reference genes

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