Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0026472 Camellia sinensis var. sinensis HOM05D007031 ORTHO05D008815 1.7e-69 265.8 124 100.0
CSS0002961 Camellia sinensis var. sinensis HOM05D007031 ORTHO05D008815 1.3e-64 249.6 151 81.5
CSS0040909 Camellia sinensis var. sinensis HOM05D007031 ORTHO05D008815 1.3e-53 213.0 148 73.6
Duzib205G0920 Durio zibethinus HOM05D007031 ORTHO05D008815 1.3e-37 159.8 147 59.2
Dinv21635 Davidia involucrata HOM05D007031 ORTHO05D008815 2.9e-37 158.7 140 62.1
Sp7g15180 Schrenkiella parvula HOM05D007031 ORTHO05D008815 5.0e-37 157.9 125 62.4
THA.LOC104815489 Tarenaya hassleriana HOM05D007031 ORTHO05D008815 2.5e-36 155.6 149 57.0
Solyc08g007380.4 Solanum lycopersicum HOM05D007031 ORTHO05D008815 7.2e-36 154.1 152 57.9
Sopen08g003330 Solanum pennellii HOM05D007031 ORTHO05D008815 7.2e-36 154.1 152 57.9
Actinidia14432 Actinidia chinensis HOM05D007031 ORTHO05D008815 1.6e-35 152.9 153 56.2
Carub.0007s2484 Capsella rubella HOM05D007031 ORTHO05D008815 2.7e-35 152.1 145 55.9
Ciclev10022693m.g Citrus clementina HOM05D007031 ORTHO05D008815 2.7e-35 152.1 150 56.0
MSTRG.13772 Avicennia marina HOM05D007031 ORTHO05D008815 6.1e-35 151.0 147 56.5
TAR636G3191 Trochodendron aralioides HOM05D007031 ORTHO05D008815 6.1e-35 151.0 147 57.8
CAN.G1227.14 Capsicum annuum HOM05D007031 ORTHO05D008815 3.9e-34 148.3 143 56.6
Lj2A217G30 Lonicera japonica HOM05D007031 ORTHO05D008815 5.1e-34 147.9 141 56.7
PSO386G0128 Papaver somniferum HOM05D007031 ORTHO05D008815 5.1e-34 147.9 143 54.5
FAN08G1843 Fragaria x ananassa HOM05D007031 ORTHO05D008815 8.8e-34 147.1 147 56.5
Lalb_Chr09g0324411 Lupinus albus HOM05D007031 ORTHO05D008815 1.1e-33 146.7 150 58.7
BcaC09g50373 Brassica carinata HOM05D007031 ORTHO05D008815 1.5e-33 146.4 149 53.0
CiPaw.12G109600 Carya illinoinensis HOM05D007031 ORTHO05D008815 1.5e-33 146.4 152 52.6
Gohir.D08G188900 Gossypium hirsutum HOM05D007031 ORTHO05D008815 1.5e-33 146.4 148 56.8
Gorai.004G199000 Gossypium raimondii HOM05D007031 ORTHO05D008815 1.5e-33 146.4 148 56.8
Cfa012711 Carpinus fangiana HOM05D007031 ORTHO05D008815 2.0e-33 146.0 154 56.5
BraA01t02001Z Brassica rapa HOM05D007031 ORTHO05D008815 2.6e-33 145.6 144 52.8
FAN18G3883 Fragaria x ananassa HOM05D007031 ORTHO05D008815 3.3e-33 145.2 147 56.5
RcHm_v2.0_Chr7g0203161 Rosa chinensis HOM05D007031 ORTHO05D008815 3.3e-33 145.2 147 56.5
BolC1t02559H Brassica oleracea HOM05D007031 ORTHO05D008815 7.4e-33 144.1 148 52.0
AL7G38260 Arabidopsis lyrata HOM05D007031 ORTHO05D008815 9.7e-33 143.7 142 52.8
Thhalv10026497m.g Eutrema salsugineum HOM05D007031 ORTHO05D008815 9.7e-33 143.7 148 52.0
FvH4_5g18810 Fragaria vesca HOM05D007031 ORTHO05D008815 9.7e-33 143.7 144 56.9
vmacro16391 Vaccinium macrocarpon HOM05D007031 ORTHO05D008815 9.7e-33 143.7 84 77.4
TWI60G0154 Tripterygium wilfordii HOM05D007031 ORTHO05D008815 1.3e-32 143.3 143 55.9
FAN13G0327 Fragaria x ananassa HOM05D007031 ORTHO05D008815 1.7e-32 142.9 147 55.8
BcaNung00171 Brassica carinata HOM05D007031 ORTHO05D008815 2.2e-32 142.5 149 53.0
Cc08_g12500 Coffea canephora HOM05D007031 ORTHO05D008815 2.2e-32 142.5 148 54.1
AT4G16566 Arabidopsis thaliana HOM05D007031 ORTHO05D008815 4.8e-32 141.4 142 52.1
ECA232G3888 Erigeron canadensis HOM05D007031 ORTHO05D008815 4.8e-32 141.4 141 56.0
Glyma.11G032300 Glycine max HOM05D007031 ORTHO05D008815 4.8e-32 141.4 150 55.3
Lsat_1_v5_gn_5_187960 Lactuca sativa HOM05D007031 ORTHO05D008815 4.8e-32 141.4 144 56.2
PSO724G0679 Papaver somniferum HOM05D007031 ORTHO05D008815 1.1e-31 140.2 138 52.9
Aa31LG2G12690 Aethionema arabicum HOM05D007031 ORTHO05D008815 1.4e-31 139.8 147 49.7
Eucgr.E00427 Eucalyptus grandis HOM05D007031 ORTHO05D008815 1.4e-31 139.8 142 54.2
Potri.003G076400 Populus trichocarpa HOM05D007031 ORTHO05D008815 1.8e-31 139.4 140 57.1
CANSAT21G0077 Cannabis sativa HOM05D007031 ORTHO05D008815 3.1e-31 138.7 144 54.2
DCAR_027778 Daucus carota HOM05D007031 ORTHO05D008815 4.1e-31 138.3 152 49.3
Sed0003740 Sechium edule HOM05D007031 ORTHO05D008815 4.1e-31 138.3 142 57.0
Hma1.2p1_0316F.1_g123210 Hydrangea macrophylla HOM05D007031 ORTHO05D008815 7.0e-31 137.5 78 79.5
Aqoxy5G01014 Aquilegia oxysepala HOM05D007031 ORTHO05D008815 9.1e-31 137.1 143 53.8
CARHR223050 Cardamine hirsuta HOM05D007031 ORTHO05D008815 9.1e-31 137.1 142 50.0
Lj2g0002187 Lotus japonicus HOM05D007031 ORTHO05D008815 9.1e-31 137.1 150 55.3
Phvul.002G062701 Phaseolus vulgaris HOM05D007031 ORTHO05D008815 9.1e-31 137.1 144 53.5
TPR.G25905 Trifolium pratense HOM05D007031 ORTHO05D008815 9.1e-31 137.1 146 55.5
THA.LOC104815507 Tarenaya hassleriana HOM05D007031 ORTHO05D008815 2.0e-30 136.0 79 77.2
Atru.chr9.1322 Acer truncatum HOM05D007031 ORTHO05D008815 3.5e-30 135.2 80 76.2
CsaV3_5G004200 Cucumis sativus L. HOM05D007031 ORTHO05D008815 3.5e-30 135.2 142 52.8
Gohir.A08G170700 Gossypium hirsutum HOM05D007031 ORTHO05D008815 3.5e-30 135.2 152 52.6
ClCG01G004020 Citrullus lanatus HOM05D007031 ORTHO05D008815 7.7e-30 134.0 75 80.0
Migut.E00966 Erythranthe guttata HOM05D007031 ORTHO05D008815 1.0e-29 133.7 139 54.0
arahy.Tifrunner.gnm1.ann1.R85P7C Arachis hypogaea HOM05D007031 ORTHO05D008815 1.3e-29 133.3 143 54.5
Migut.E01683 Erythranthe guttata HOM05D007031 ORTHO05D008815 1.3e-29 133.3 139 54.0
arahy.Tifrunner.gnm1.ann1.WL6NYT Arachis hypogaea HOM05D007031 ORTHO05D008815 2.2e-29 132.5 143 53.8
MELO3C005535.2 Cucumis melo HOM05D007031 ORTHO05D008815 2.9e-29 132.1 75 78.7
AL7G38210 Arabidopsis lyrata HOM05D007031 ORTHO05D008815 3.8e-29 131.7 76 77.6
QL12p012249 Quercus lobata HOM05D007031 ORTHO05D008815 3.8e-29 131.7 84 73.8
MBI04_g09491_MAGBIO Magnolia biondii HOM05D007031 ORTHO05D008815 1.1e-28 130.2 76 76.3
Peaxi162Scf00102g01143 Petunia axillaris HOM05D007031 ORTHO05D008815 1.1e-28 130.2 76 77.6
Psat2g177560 Pisum sativum HOM05D007031 ORTHO05D008815 1.5e-28 129.8 153 49.7
FAN04G1478 Fragaria x ananassa HOM05D007031 ORTHO05D008815 2.5e-28 129.0 79 75.9
HPP92_021039 Vanilla planifolia HOM05D007031 ORTHO05D008815 7.2e-28 127.5 79 72.2
HPP92_027426 Vanilla planifolia HOM05D007031 ORTHO05D008815 7.2e-28 127.5 79 72.2
Nn6g33971 Nelumbo nucifera HOM05D007031 ORTHO05D008815 9.4e-28 127.1 78 74.4
CDE09G0628 Ceratophyllum demersum HOM05D005321 ORTHO05D006360 2.1e-27 125.9 136 50.0
FAN14G5160 Fragaria x ananassa HOM05D007031 ORTHO05D008815 2.1e-27 125.9 78 73.1
unitig_699.g19776 Utricularia gibba HOM05D007031 ORTHO05D008815 2.7e-27 125.6 76 73.7
BcaNung02861 Brassica carinata HOM05D007031 ORTHO05D008815 6.1e-27 124.4 76 71.1
ATR0317G125 Amborella trichopoda HOM05D007031 ORTHO05D008815 4.0e-26 121.7 137 48.9
Nitab4.5_0000712g0190 Nicotiana tabacum HOM05D007031 ORTHO05D008815 1.1e-25 120.2 116 54.3
Os04g0535400 Oryza sativa ssp. japonica HOM05D007031 ORTHO05D008815 2.0e-25 119.4 76 71.1
SEGI_08804 Sequoiadendron giganteum HOM05D007031 ORTHO05D008815 2.0e-25 119.4 137 46.7
Oeu062969.1 Olea europaea HOM05D007031 ORTHO05D008815 2.6e-25 119.0 115 55.7
Hund14533 Selenicereus undatus HOM05D007031 ORTHO05D008815 7.5e-25 117.5 76 73.7
EL10Ac5g13074 Beta vulgaris HOM05D007031 ORTHO05D008815 9.7e-25 117.1 102 56.9
Zm00001eb427450 Zea mays HOM05D007031 ORTHO05D008815 9.7e-25 117.1 76 67.1
CiPaw.11G153700 Carya illinoinensis HOM05D007031 ORTHO05D008815 2.4e-23 112.5 85 64.7
Haze_07923 Corylus avellana HOM05D007031 ORTHO05D008815 1.7e-21 106.3 63 76.2
C01p26150 Brassica napus HOM05D007031 ORTHO05D008815 2.5e-20 102.4 123 45.5
A01p20650 Brassica napus HOM05D007031 ORTHO05D008815 7.2e-20 100.9 123 45.5
Manes.02G039100 Manihot esculenta HOM05D007031 ORTHO05D008815 3.6e-19 98.6 112 51.8
MD04G1063700 Malus domestica HOM05D007031 ORTHO05D008815 1.4e-18 96.7 116 49.1
A03p50000 Brassica napus HOM05D007337 ORTHO05D004972 2.3e-18 95.9 102 51.0
BolC7t45328H Brassica oleracea HOM05D007031 ORTHO05D008815 2.3e-18 95.9 58 72.4
VMungo1215G1202 Vigna mungo HOM05D007031 ORTHO05D008815 2.3e-18 95.9 114 48.2
Sabra03G0047000 Salix brachista HOM05D007031 ORTHO05D008815 4.0e-18 95.1 158 39.2
SMO134G0120 Selaginella moellendorffii HOM05D000076 ORTHO05D001279 2.6e-17 92.4 74 52.7
SMO274G0074 Selaginella moellendorffii HOM05D007031 ORTHO05D008815 2.6e-17 92.4 74 52.7
C07p48030 Brassica napus HOM05D007337 ORTHO05D004972 1.7e-16 89.7 100 49.0
Pp3c5_26880 Physcomitrium patens HOM05D007031 ORTHO05D008815 8.3e-16 87.4 76 48.7
BcaC06g33496 Brassica carinata HOM05D007031 ORTHO05D008815 2.7e-14 82.4 45 75.6
Nitab4.5_0002225g0110 Nicotiana tabacum HOM05D007031 ORTHO05D008815 1.3e-13 80.1 85 55.3
AUR62042788 Chenopodium quinoa HOM05D007031 ORTHO05D008815 2.2e-13 79.3 111 44.1
AUR62007512 Chenopodium quinoa HOM05D007031 ORTHO05D008815 2.9e-13 79.0 48 72.9
Cre03.g169200 Chlamydomonas reinhardtii HOM05D007031 ORTHO05D008815 1.2e-09 67.0 59 52.5
Prupe.5G068700 Prunus persica HOM05D007031 ORTHO05D008815 1.5e-09 66.6 150 34.7
MCO15G691 Micromonas commoda HOM05D007031 ORTHO05D008815 2.6e-09 65.9 54 53.7
Pp3c6_3420 Physcomitrium patens HOM05D029721 ORTHO05D008815 2.6e-09 65.9 46 63.0
FAN02G0786 Fragaria x ananassa HOM05D007031 ORTHO05D008815 5.7e-09 64.7 103 42.7


User provided reference genes

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