Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0026470 Camellia sinensis var. sinensis HOM05D007253 ORTHO05D009055 6.9e-73 277.3 151 100.0
CSS0024958 Camellia sinensis var. sinensis HOM05D007253 ORTHO05D009055 9.9e-64 246.9 150 92.7
CSS0046604 Camellia sinensis var. sinensis HOM05D007253 ORTHO05D009055 8.4e-63 243.8 146 93.8
CSS0050010 Camellia sinensis var. sinensis HOM05D007253 ORTHO05D009055 8.4e-63 243.8 146 93.8
Actinidia14140 Actinidia chinensis HOM05D007253 ORTHO05D009055 7.9e-45 184.1 145 73.8
Dinv03404 Davidia involucrata HOM05D007253 ORTHO05D009055 3.9e-44 181.8 150 72.7
Duzib187G0122 Durio zibethinus HOM05D007253 ORTHO05D009055 3.3e-43 178.7 148 71.6
COL.COLO4_18974 Corchorus olitorius HOM05D007253 ORTHO05D009055 1.4e-41 173.3 148 70.3
Ciclev10009764m.g Citrus clementina HOM05D007253 ORTHO05D009055 2.4e-41 172.6 144 71.5
TWI63G1073 Tripterygium wilfordii HOM05D007253 ORTHO05D009055 2.4e-41 172.6 111 87.4
MELO3C016946.2 Cucumis melo HOM05D007253 ORTHO05D009055 4.1e-41 171.8 149 72.5
Thecc.09G013200 Theobroma cacao HOM05D007253 ORTHO05D009055 5.3e-41 171.4 148 69.6
Sed0002011 Sechium edule HOM05D007253 ORTHO05D009055 6.9e-41 171.0 153 68.6
Atru.chr7.2576 Acer truncatum HOM05D007253 ORTHO05D009055 9.0e-41 170.6 103 92.2
TAR626G1108 Trochodendron aralioides HOM05D007253 ORTHO05D009055 2.6e-40 169.1 136 72.8
ClCG05G016120 Citrullus lanatus HOM05D007253 ORTHO05D009055 1.3e-39 166.8 116 84.5
Prupe.1G396700 Prunus persica HOM05D007253 ORTHO05D009055 2.9e-39 165.6 148 70.3
Gohir.D05G063600 Gossypium hirsutum HOM05D007253 ORTHO05D009055 5.5e-38 161.4 149 66.4
Duzib168G0559 Durio zibethinus HOM05D007253 ORTHO05D009055 9.3e-38 160.6 103 88.3
FAN27G1409 Fragaria x ananassa HOM05D007253 ORTHO05D009055 2.1e-37 159.5 117 77.8
Nn8g40104 Nelumbo nucifera HOM05D007253 ORTHO05D009055 2.1e-37 159.5 130 74.6
Sc09g0010780 Simmondsia chinensis HOM05D007253 ORTHO05D009055 2.1e-37 159.5 139 70.5
CiPaw.07G233200 Carya illinoinensis HOM05D007253 ORTHO05D009055 2.7e-37 159.1 136 72.1
GSVIVG01035999001 Vitis vinifera HOM05D007253 ORTHO05D009055 3.6e-37 158.7 112 80.4
CANSAT35G1478 Cannabis sativa HOM05D007253 ORTHO05D009055 4.6e-37 158.3 114 78.9
Aqoxy7G03301 Aquilegia oxysepala HOM05D007253 ORTHO05D009055 1.0e-36 157.1 119 63.9
Cc08_g07700 Coffea canephora HOM05D007253 ORTHO05D009055 1.0e-36 157.1 103 81.6
FvH4_2g41340 Fragaria vesca HOM05D007253 ORTHO05D009055 1.0e-36 157.1 111 80.2
Gorai.009G064300 Gossypium raimondii HOM05D007253 ORTHO05D009055 2.3e-36 156.0 149 65.1
Cpa.g.sc148.44 Carica papaya HOM05D007253 ORTHO05D009055 3.0e-36 155.6 103 84.5
FAN15G3156 Fragaria x ananassa HOM05D007253 ORTHO05D009055 3.0e-36 155.6 111 79.3
Potri.006G266800 Populus trichocarpa HOM05D007253 ORTHO05D009055 3.0e-36 155.6 109 81.7
RcHm_v2.0_Chr6g0299201 Rosa chinensis HOM05D007253 ORTHO05D009055 3.0e-36 155.6 140 69.3
HanXRQChr13g0413301 Helianthus annuus HOM05D007253 ORTHO05D009055 6.7e-36 154.5 132 69.7
Manes.03G007000 Manihot esculenta HOM05D007253 ORTHO05D009055 6.7e-36 154.5 142 65.5
SalBow8G5515 Salvia bowleyana HOM05D007253 ORTHO05D009055 8.7e-36 154.1 105 81.0
Nitab4.5_0005450g0020 Nicotiana tabacum HOM05D007253 ORTHO05D009055 1.9e-35 152.9 142 69.0
Nitab4.5_0000264g0020 Nicotiana tabacum HOM05D007253 ORTHO05D009055 2.5e-35 152.5 142 69.0
Lj1g0002882 Lotus japonicus HOM05D007253 ORTHO05D009055 3.3e-35 152.1 146 62.3
PSO063G6023 Papaver somniferum HOM05D007253 ORTHO05D009055 3.3e-35 152.1 132 72.0
Glyma.04G059900 Glycine max HOM05D007253 ORTHO05D009055 4.3e-35 151.8 140 63.6
CAN.G285.13 Capsicum annuum HOM05D007253 ORTHO05D009055 7.4e-35 151.0 143 67.1
Oeu023241.1 Olea europaea HOM05D007253 ORTHO05D009055 9.7e-35 150.6 104 80.8
Lsat_1_v5_gn_6_77860 Lactuca sativa HOM05D007253 ORTHO05D009055 1.6e-34 149.8 141 68.8
PGR044G0212 Punica granatum HOM05D007253 ORTHO05D009055 1.6e-34 149.8 103 83.5
ATR0580G321 Amborella trichopoda HOM05D007253 ORTHO05D009055 2.2e-34 149.4 106 81.1
Sp4g03910 Schrenkiella parvula HOM05D007253 ORTHO05D009055 2.2e-34 149.4 131 70.2
vmacro05116 Vaccinium macrocarpon HOM05D007253 ORTHO05D009055 2.2e-34 149.4 165 60.0
HPP92_010354 Vanilla planifolia HOM05D007253 ORTHO05D009055 2.2e-34 149.4 105 78.1
BcaB06g28020 Brassica carinata HOM05D007253 ORTHO05D009055 2.8e-34 149.1 130 67.7
Eucgr.C04033 Eucalyptus grandis HOM05D007253 ORTHO05D009055 2.8e-34 149.1 144 64.6
MD15G1043300 Malus domestica HOM05D007253 ORTHO05D009055 3.7e-34 148.7 109 80.7
BolC4t27019H Brassica oleracea HOM05D007253 ORTHO05D009055 4.8e-34 148.3 130 67.7
Solyc08g006620.3 Solanum lycopersicum HOM05D007253 ORTHO05D009055 4.8e-34 148.3 144 68.1
CARHR116800 Cardamine hirsuta HOM05D007253 ORTHO05D009055 6.3e-34 147.9 117 75.2
PSO782G0429 Papaver somniferum HOM05D007253 ORTHO05D009055 6.3e-34 147.9 132 71.2
A04p19250 Brassica napus HOM05D007253 ORTHO05D009055 8.2e-34 147.5 130 67.7
BraA04t17525Z Brassica rapa HOM05D007253 ORTHO05D009055 8.2e-34 147.5 130 67.7
Potri.018G016400 Populus trichocarpa HOM05D007253 ORTHO05D009055 1.4e-33 146.7 100 83.0
BcaC02g08395 Brassica carinata HOM05D007253 ORTHO05D009055 2.4e-33 146.0 130 66.9
C04p54740 Brassica napus HOM05D007253 ORTHO05D009055 2.4e-33 146.0 130 66.9
Thhalv10000367m.g Eutrema salsugineum HOM05D007253 ORTHO05D009055 2.4e-33 146.0 139 67.6
Hund25608 Selenicereus undatus HOM05D007253 ORTHO05D009055 2.4e-33 146.0 104 76.9
Glyma.06G060300 Glycine max HOM05D007253 ORTHO05D009055 5.3e-33 144.8 109 74.3
EL10Ac2g02465 Beta vulgaris HOM05D007253 ORTHO05D009055 6.9e-33 144.4 148 60.1
Sopen08g002570 Solanum pennellii HOM05D007253 ORTHO05D009055 6.9e-33 144.4 108 78.7
SGA_v2.0_scaffold4G02163 Striga asiatica HOM05D007253 ORTHO05D009055 9.1e-33 144.1 131 67.2
Medtr3g105830 Medicago truncatula HOM05D007253 ORTHO05D009055 1.2e-32 143.7 120 70.0
Psat5g033080 Pisum sativum HOM05D007253 ORTHO05D009055 1.2e-32 143.7 110 71.8
MBI14_g31385_MAGBIO Magnolia biondii HOM05D007253 ORTHO05D009055 1.5e-32 143.3 98 83.7
MD08G1052200 Malus domestica HOM05D007253 ORTHO05D009055 1.5e-32 143.3 116 61.2
CDE05G3047 Ceratophyllum demersum HOM05D007253 ORTHO05D009055 2.0e-32 142.9 99 83.8
ECA240G1715 Erigeron canadensis HOM05D001941 ORTHO05D002198 2.0e-32 142.9 125 68.8
TPR.G1881 Trifolium pratense HOM05D007253 ORTHO05D009055 2.0e-32 142.9 145 59.3
Carub.0004s0449 Capsella rubella HOM05D007253 ORTHO05D009055 2.6e-32 142.5 131 64.9
THA.LOC104803610 Tarenaya hassleriana HOM05D007253 ORTHO05D009055 4.5e-32 141.7 122 69.7
arahy.Tifrunner.gnm1.ann1.G7TND8 Arachis hypogaea HOM05D007253 ORTHO05D009055 7.7e-32 141.0 104 78.8
Ah.00g238170 Amaranthus hybridus HOM05D007253 ORTHO05D009055 1.3e-31 140.2 112 72.3
AL4G15950 Arabidopsis lyrata HOM05D007253 ORTHO05D009055 1.3e-31 140.2 100 79.0
AT2G24860 Arabidopsis thaliana HOM05D007253 ORTHO05D009055 1.3e-31 140.2 100 79.0
Aa31LG7G11560 Aethionema arabicum HOM05D007253 ORTHO05D009055 1.7e-31 139.8 112 73.2
Ah.12g060580 Amaranthus hybridus HOM05D007253 ORTHO05D009055 1.7e-31 139.8 104 76.0
arahy.Tifrunner.gnm1.ann1.2K72KI Arachis hypogaea HOM05D007253 ORTHO05D009055 2.2e-31 139.4 104 77.9
Glyma.17G221800 Glycine max HOM05D007253 ORTHO05D009055 2.9e-31 139.0 110 74.5
DCAR_000661 Daucus carota HOM05D007253 ORTHO05D009055 5.0e-31 138.3 109 74.3
Migut.E01444 Erythranthe guttata HOM05D007253 ORTHO05D009055 5.0e-31 138.3 106 76.4
Phvul.009G086100 Phaseolus vulgaris HOM05D007253 ORTHO05D009055 6.5e-31 137.9 108 73.1
Os09g0423700 Oryza sativa ssp. japonica HOM05D007253 ORTHO05D009055 8.5e-31 137.5 101 77.2
Lalb_Chr23g0268151 Lupinus albus HOM05D007253 ORTHO05D009055 1.4e-30 136.7 107 72.9
Glyma.14G104200 Glycine max HOM05D007253 ORTHO05D009055 1.9e-30 136.3 111 73.9
MSTRG.13960 Avicennia marina HOM05D007253 ORTHO05D009055 2.5e-30 136.0 100 77.0
arahy.Tifrunner.gnm1.ann1.LF5WZD Arachis hypogaea HOM05D007253 ORTHO05D009055 7.2e-30 134.4 108 73.1
Zm00001eb313320 Zea mays HOM05D007253 ORTHO05D009055 8.8e-28 127.5 71 77.5
CDE02G4354 Ceratophyllum demersum HOM05D007253 ORTHO05D009055 1.1e-27 127.1 94 78.7
SEGI_37228 Sequoiadendron giganteum HOM05D007253 ORTHO05D009055 8.2e-26 120.9 101 69.3
unitig_32.g11120 Utricularia gibba HOM05D007253 ORTHO05D009055 3.1e-25 119.0 98 71.4
TAR383G0216 Trochodendron aralioides HOM05D007253 ORTHO05D009055 5.3e-25 118.2 80 83.8
PGSC0003DMG400026305 Solanum tuberosum HOM05D005612 ORTHO05D007014 2.6e-24 115.9 75 88.0
Peaxi162Scf00045g01937 Petunia axillaris HOM05D007253 ORTHO05D009055 1.3e-23 113.6 75 88.0
Pp3c6_11160 Physcomitrium patens HOM05D007253 ORTHO05D009055 2.9e-23 112.5 91 69.2
AagrBONN_evm.TU.Sc2ySwM_117.2542 Anthoceros agrestis HOM05D007253 ORTHO05D009055 3.8e-23 112.1 89 69.7
AUR62032436 Chenopodium quinoa HOM05D007253 ORTHO05D009055 5.0e-23 111.7 79 81.0
SMO196G0205 Selaginella moellendorffii HOM05D007253 ORTHO05D009055 3.6e-21 105.5 83 71.1
Mapoly0121s0030 Marchantia polymorpha HOM05D007253 ORTHO05D009055 2.3e-20 102.8 89 62.9
Gohir.A05G061100 Gossypium hirsutum HOM05D007253 ORTHO05D009055 1.6e-13 80.1 87 51.7
CsaV3_4G036390 Cucumis sativus L. HOM05D018710 ORTHO05D009055 1.3e-07 60.5 86 48.8
Hma1.2p1_0022F.1_g014850 Hydrangea macrophylla HOM05D007253 ORTHO05D009055 3.2e-06 55.8 33 81.8
Oeu010291.1 Olea europaea HOM05D007253 ORTHO05D009055 3.2e-06 55.8 58 44.8
Rhsim07G0166900 Rhododendron simsii HOM05D018710 ORTHO05D023780 5.5e-06 55.1 44 63.6


User provided reference genes

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