Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0026468 Camellia sinensis var. sinensis HOM05D007175 ORTHO05D009032 2.9e-87 325.1 153 100.0
CSS0005025 Camellia sinensis var. sinensis HOM05D007175 ORTHO05D009032 1.0e-71 273.5 132 98.5
CSS0000573 Camellia sinensis var. sinensis HOM05D007175 ORTHO05D009032 2.6e-67 258.8 130 95.4
CSS0003113 Camellia sinensis var. sinensis HOM05D007175 ORTHO05D009032 2.6e-67 258.8 130 95.4
CSS0005819 Camellia sinensis var. sinensis HOM05D007175 ORTHO05D009032 2.6e-67 258.8 130 95.4
CSS0024225 Camellia sinensis var. sinensis HOM05D007175 ORTHO05D009032 1.1e-65 253.4 137 89.8
Dinv30325 Davidia involucrata HOM05D007175 ORTHO05D009032 3.2e-62 241.9 130 88.5
Actinidia37900 Actinidia chinensis HOM05D007175 ORTHO05D009032 4.2e-62 241.5 130 89.2
Rhsim07G0258300 Rhododendron simsii HOM05D007175 ORTHO05D009032 8.0e-61 237.3 130 86.9
Cfa014168 Carpinus fangiana HOM05D007175 ORTHO05D009032 4.0e-60 235.0 130 86.9
Haze_22891 Corylus avellana HOM05D007175 ORTHO05D009032 2.8e-58 228.8 130 84.6
CiPaw.07G130000 Carya illinoinensis HOM05D007175 ORTHO05D009032 3.7e-58 228.4 130 83.1
GSVIVG01013462001 Vitis vinifera HOM05D007175 ORTHO05D009032 3.7e-58 228.4 130 83.1
TAR376G0324 Trochodendron aralioides HOM05D007175 ORTHO05D009032 6.3e-58 227.6 130 83.8
Oeu000737.1 Olea europaea HOM05D007175 ORTHO05D009032 8.2e-58 227.3 130 81.5
Cpa.g.sc36.96 Carica papaya HOM05D007175 ORTHO05D009032 1.1e-57 226.9 130 82.3
QL02p016318 Quercus lobata HOM05D007175 ORTHO05D009032 1.4e-57 226.5 130 82.3
FvH4_5g26760 Fragaria vesca HOM05D007175 ORTHO05D009032 5.3e-57 224.6 130 81.5
FAN18G0319 Fragaria x ananassa HOM05D007175 ORTHO05D009032 5.3e-57 224.6 130 81.5
Sabra05G0201000 Salix brachista HOM05D007175 ORTHO05D009032 5.3e-57 224.6 130 80.0
FAN08G3457 Fragaria x ananassa HOM05D007175 ORTHO05D009032 7.0e-57 224.2 130 80.8
Phvul.008G212600 Phaseolus vulgaris HOM05D007175 ORTHO05D009032 7.0e-57 224.2 130 80.0
Eucgr.F03631 Eucalyptus grandis HOM05D007175 ORTHO05D009032 9.1e-57 223.8 130 80.8
FAN13G2687 Fragaria x ananassa HOM05D007175 ORTHO05D009032 1.2e-56 223.4 130 80.0
Cc10_g00080 Coffea canephora HOM05D007175 ORTHO05D009032 1.6e-56 223.0 130 83.1
FAN04G1040 Fragaria x ananassa HOM05D007175 ORTHO05D009032 1.6e-56 223.0 130 80.8
Potri.005G259700 Populus trichocarpa HOM05D007175 ORTHO05D009032 1.6e-56 223.0 130 80.0
VMungo0647G1837 Vigna mungo HOM05D007175 ORTHO05D009032 1.6e-56 223.0 130 80.0
RcHm_v2.0_Chr7g0217631 Rosa chinensis HOM05D007175 ORTHO05D009032 2.0e-56 222.6 130 80.8
Nn5g31081 Nelumbo nucifera HOM05D007175 ORTHO05D009032 2.7e-56 222.2 130 81.5
TWI36G1138 Tripterygium wilfordii HOM05D007175 ORTHO05D009032 2.7e-56 222.2 130 79.2
DCAR_013353 Daucus carota HOM05D007175 ORTHO05D009032 3.5e-56 221.9 130 80.0
Glyma.02G269500 Glycine max HOM05D007175 ORTHO05D009032 4.5e-56 221.5 130 78.5
Psat2g024960 Pisum sativum HOM05D007175 ORTHO05D009032 5.9e-56 221.1 130 78.5
LjContig00564g0015126 Lotus japonicus HOM05D007175 ORTHO05D009032 7.7e-56 220.7 130 80.0
Glyma.14G047400 Glycine max HOM05D007175 ORTHO05D009032 1.0e-55 220.3 130 78.5
Lalb_Chr10g0105651 Lupinus albus HOM05D007175 ORTHO05D009032 1.3e-55 219.9 130 78.5
Lalb_Chr17g0347321 Lupinus albus HOM05D007175 ORTHO05D009032 1.3e-55 219.9 130 77.7
THA.LOC104801648 Tarenaya hassleriana HOM05D007175 ORTHO05D009032 1.3e-55 219.9 130 77.7
Aqoxy5G03363 Aquilegia oxysepala HOM05D007175 ORTHO05D009032 1.7e-55 219.5 130 80.8
Medtr5g085780 Medicago truncatula HOM05D007175 ORTHO05D009032 1.7e-55 219.5 130 78.5
Prupe.5G000900 Prunus persica HOM05D007175 ORTHO05D009032 2.2e-55 219.2 130 80.0
THA.LOC104806865 Tarenaya hassleriana HOM05D007175 ORTHO05D009032 6.5e-55 217.6 130 79.2
AL8G19150 Arabidopsis lyrata HOM05D007175 ORTHO05D009032 8.5e-55 217.2 130 78.5
TPR.G14442 Trifolium pratense HOM05D007175 ORTHO05D009032 8.5e-55 217.2 130 76.2
Ca_06102_v3 Cicer arietinum L. HOM05D007175 ORTHO05D009032 1.9e-54 216.1 130 78.5
Atru.chr13.18 Acer truncatum HOM05D007175 ORTHO05D009032 2.5e-54 215.7 130 78.5
HanXRQChr14g0427501 Helianthus annuus HOM05D007175 ORTHO05D009032 2.5e-54 215.7 130 79.2
COL.COLO4_12263 Corchorus olitorius HOM05D007175 ORTHO05D009032 7.2e-54 214.2 130 77.7
Duzib116G0712 Durio zibethinus HOM05D007175 ORTHO05D009032 7.2e-54 214.2 130 79.2
Thecc.08G097400 Theobroma cacao HOM05D007175 ORTHO05D009032 7.2e-54 214.2 130 77.7
EL10Ac1g01857 Beta vulgaris HOM05D007175 ORTHO05D009032 1.2e-53 213.4 130 76.2
arahy.Tifrunner.gnm1.ann1.YTK8KP Arachis hypogaea HOM05D007175 ORTHO05D009032 2.7e-53 212.2 130 74.6
BraA09t37575Z Brassica rapa HOM05D007175 ORTHO05D009032 2.7e-53 212.2 130 77.7
Lsat_1_v5_gn_2_2721 Lactuca sativa HOM05D007175 ORTHO05D009032 2.7e-53 212.2 133 79.7
PSO782G3151 Papaver somniferum HOM05D007175 ORTHO05D009032 2.7e-53 212.2 130 78.5
BcaC04g21999 Brassica carinata HOM05D007175 ORTHO05D009032 3.6e-53 211.8 130 76.9
C09p25000 Brassica napus HOM05D007175 ORTHO05D009032 3.6e-53 211.8 130 76.9
Gohir.D01G086300 Gossypium hirsutum HOM05D007175 ORTHO05D009032 3.6e-53 211.8 130 76.9
BolC9t55392H Brassica oleracea HOM05D007175 ORTHO05D009032 4.7e-53 211.5 130 76.2
A09p19640 Brassica napus HOM05D007175 ORTHO05D009032 6.1e-53 211.1 130 76.9
CsaV3_4G037860 Cucumis sativus L. HOM05D007175 ORTHO05D009032 6.1e-53 211.1 130 74.6
AT5G42370 Arabidopsis thaliana HOM05D007175 ORTHO05D009032 8.0e-53 210.7 130 75.4
arahy.Tifrunner.gnm1.ann1.BW2M8B Arachis hypogaea HOM05D000005 ORTHO05D009032 8.0e-53 210.7 130 73.8
CARHR285020 Cardamine hirsuta HOM05D007175 ORTHO05D009032 8.0e-53 210.7 130 75.4
ClCG11G019270 Citrullus lanatus HOM05D007175 ORTHO05D009032 8.0e-53 210.7 130 74.6
MELO3C017080.2 Cucumis melo HOM05D007175 ORTHO05D009032 8.0e-53 210.7 130 74.6
BcaB07g31081 Brassica carinata HOM05D007175 ORTHO05D009032 1.0e-52 210.3 130 76.9
PSO063G1612 Papaver somniferum HOM05D007175 ORTHO05D009032 1.0e-52 210.3 130 78.5
Aa31LG9G12520 Aethionema arabicum HOM05D007175 ORTHO05D009032 1.4e-52 209.9 130 75.4
CANSAT25G0321 Cannabis sativa HOM05D007175 ORTHO05D009032 1.4e-52 209.9 141 74.5
PSO063G3513 Papaver somniferum HOM05D007175 ORTHO05D009032 1.8e-52 209.5 130 78.5
Thhalv10003204m.g Eutrema salsugineum HOM05D007175 ORTHO05D009032 2.3e-52 209.1 130 73.1
Gorai.002G111700 Gossypium raimondii HOM05D007175 ORTHO05D009032 3.0e-52 208.8 130 76.2
Ciclev10003552m.g Citrus clementina HOM05D007175 ORTHO05D009032 4.0e-52 208.4 132 73.5
Gohir.A01G101333 Gossypium hirsutum HOM05D007175 ORTHO05D009032 5.2e-52 208.0 137 72.3
ECA238G4354 Erigeron canadensis HOM05D007175 ORTHO05D009032 2.6e-51 205.7 130 74.6
Lj4A814G51 Lonicera japonica HOM05D007175 ORTHO05D009032 4.4e-51 204.9 108 87.0
ATR0605G370 Amborella trichopoda HOM05D007175 ORTHO05D009032 5.7e-51 204.5 128 77.3
HPP92_018864 Vanilla planifolia HOM05D007175 ORTHO05D009032 2.2e-50 202.6 130 75.4
Sed0015844 Sechium edule HOM05D007175 ORTHO05D009032 2.8e-50 202.2 130 73.1
CAN.G1330.33 Capsicum annuum HOM05D007175 ORTHO05D009032 3.7e-50 201.8 131 73.3
Ah.14g086450 Amaranthus hybridus HOM05D007175 ORTHO05D009032 6.3e-50 201.1 130 70.8
Zm00001eb245810 Zea mays HOM05D007175 ORTHO05D009032 1.4e-49 199.9 130 72.3
Os02g0592200 Oryza sativa ssp. japonica HOM05D007175 ORTHO05D009032 1.8e-49 199.5 130 71.5
Sp7g08160 Schrenkiella parvula HOM05D007175 ORTHO05D009032 2.4e-49 199.1 115 79.1
AUR62035193 Chenopodium quinoa HOM05D007175 ORTHO05D009032 7.0e-49 197.6 130 70.0
Manes.18G000500 Manihot esculenta HOM05D007175 ORTHO05D009032 7.0e-49 197.6 108 81.5
Carub.0008s0679 Capsella rubella HOM05D007175 ORTHO05D009032 2.0e-48 196.1 115 77.4
AUR62042532 Chenopodium quinoa HOM05D007175 ORTHO05D009032 5.9e-48 194.5 130 67.7
BcaNung05249 Brassica carinata HOM05D007175 ORTHO05D009032 1.3e-47 193.4 114 78.1
AagrBONN_evm.TU.Sc2ySwM_117.3655 Anthoceros agrestis HOM05D007175 ORTHO05D009032 5.2e-44 181.4 130 64.6
LjContig00564g0013673 Lotus japonicus HOM05D007175 ORTHO05D009032 1.3e-42 176.8 130 69.2
Mapoly0013s0050 Marchantia polymorpha HOM05D007175 ORTHO05D009032 1.3e-42 176.8 130 64.6
CBR_g4433 Chara braunii HOM05D007175 ORTHO05D009032 2.4e-41 172.6 130 63.1
SMO259G0040 Selaginella moellendorffii HOM05D007175 ORTHO05D009032 4.1e-41 171.8 130 63.1
Pp3c5_8650 Physcomitrium patens HOM05D007175 ORTHO05D009032 2.0e-40 169.5 131 61.8
HPP92_018876 Vanilla planifolia HOM05D007175 ORTHO05D009032 3.7e-34 148.7 130 60.0
Peaxi162Scf00385g01230 Petunia axillaris HOM05D007175 ORTHO05D009032 3.3e-30 135.6 84 77.4
PRCOL_00006786 Prasinoderma coloniale HOM05D007175 ORTHO05D009032 1.7e-26 123.2 146 45.9
SEGI_21773 Sequoiadendron giganteum HOM05D007175 ORTHO05D009032 2.8e-21 105.9 63 73.0
MCO15G710 Micromonas commoda HOM05D007175 ORTHO05D009032 1.1e-20 104.0 104 48.1
Lsat_1_v5_gn_8_80261 Lactuca sativa HOM05D007175 ORTHO05D009032 1.5e-11 73.6 41 78.0
Mapoly0091s0011 Marchantia polymorpha HOM05D019562 ORTHO05D021280 1.7e-10 70.1 75 44.0
Pp3c27_7660 Physcomitrium patens HOM05D019562 ORTHO05D021280 3.2e-09 65.9 75 44.0
Cre07.g321350 Chlamydomonas reinhardtii HOM05D019562 ORTHO05D021280 1.2e-08 63.9 77 40.3
AagrBONN_evm.TU.Sc2ySwM_117.1015 Anthoceros agrestis HOM05D019562 ORTHO05D021280 6.0e-08 61.6 77 39.0
CBR_g24078 Chara braunii HOM05D019562 ORTHO05D021280 6.0e-08 61.6 76 38.2
Mapoly0022s0145 Marchantia polymorpha HOM05D019562 ORTHO05D021280 3.0e-07 59.3 77 40.3


User provided reference genes

Program Settings