Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0001174 Camellia sinensis var. sinensis HOM05D007798 ORTHO05D009882 4.7e-85 317.8 154 100.0
CSS0001345 Camellia sinensis var. sinensis HOM05D007798 ORTHO05D009882 4.7e-85 317.8 154 100.0
CSS0013307 Camellia sinensis var. sinensis HOM05D007798 ORTHO05D009882 4.7e-85 317.8 154 100.0
CSS0017826 Camellia sinensis var. sinensis HOM05D007798 ORTHO05D009882 4.7e-85 317.8 154 100.0
CSS0026447 Camellia sinensis var. sinensis HOM05D007798 ORTHO05D009882 4.7e-85 317.8 154 100.0
CSS0026772 Camellia sinensis var. sinensis HOM05D007798 ORTHO05D009882 4.7e-85 317.8 154 100.0
CSS0049921 Camellia sinensis var. sinensis HOM05D007798 ORTHO05D009882 4.7e-85 317.8 154 100.0
CSS0003769 Camellia sinensis var. sinensis HOM05D007798 ORTHO05D009882 1.3e-82 309.7 154 96.8
CSS0004443 Camellia sinensis var. sinensis HOM05D007798 ORTHO05D009882 2.4e-81 305.4 154 95.5
CSS0047120 Camellia sinensis var. sinensis HOM05D007798 ORTHO05D009882 7.0e-81 303.9 154 94.8
CSS0029753 Camellia sinensis var. sinensis HOM05D007798 ORTHO05D009882 6.2e-45 184.5 137 62.8
CSS0004685 Camellia sinensis var. sinensis HOM05D007798 ORTHO05D009882 1.1e-44 183.7 137 62.8
CSS0008205 Camellia sinensis var. sinensis HOM05D007798 ORTHO05D009882 1.1e-44 183.7 137 62.8
CSS0022173 Camellia sinensis var. sinensis HOM05D007798 ORTHO05D009882 1.1e-44 183.7 137 62.8
CSS0031004 Camellia sinensis var. sinensis HOM05D007798 ORTHO05D009882 1.1e-44 183.7 137 62.8
CSS0034332 Camellia sinensis var. sinensis HOM05D007798 ORTHO05D009882 1.1e-44 183.7 137 62.8
CSS0045394 Camellia sinensis var. sinensis HOM05D007798 ORTHO05D009882 1.1e-44 183.7 137 62.8
Rhsim11G0007300 Rhododendron simsii HOM05D007798 ORTHO05D009882 1.8e-44 183.0 136 60.3
Rhsim05G0212100 Rhododendron simsii HOM05D007798 ORTHO05D009882 2.3e-44 182.6 136 60.3
Rhsim02G0017800 Rhododendron simsii HOM05D007798 ORTHO05D009882 3.1e-44 182.2 136 59.6
CSS0047376 Camellia sinensis var. sinensis HOM05D007798 ORTHO05D009882 4.0e-44 181.8 137 62.0
CSS0038208 Camellia sinensis var. sinensis HOM05D007798 ORTHO05D009882 5.2e-44 181.4 137 61.3
CSS0003759 Camellia sinensis var. sinensis HOM05D007798 ORTHO05D009882 8.9e-44 180.6 137 61.3
CSS0021747 Camellia sinensis var. sinensis HOM05D007798 ORTHO05D009882 1.5e-43 179.9 137 62.0
CSS0033268 Camellia sinensis var. sinensis HOM05D007798 ORTHO05D009882 1.5e-43 179.9 137 62.0
Rhsim01G0156700 Rhododendron simsii HOM05D007798 ORTHO05D009882 4.9e-42 174.9 138 56.5
Rhsim11G0057000 Rhododendron simsii HOM05D007798 ORTHO05D009882 8.3e-42 174.1 138 57.2
Rhsim06G0076200 Rhododendron simsii HOM05D000107 ORTHO05D009882 5.4e-41 171.4 138 55.8
Rhsim03G0060900 Rhododendron simsii HOM05D007798 ORTHO05D009882 2.7e-40 169.1 137 55.5
Rhsim01G0150700 Rhododendron simsii HOM05D007798 ORTHO05D009882 3.9e-39 165.2 132 56.1
Rhsim05G0032900 Rhododendron simsii HOM05D000107 ORTHO05D000062 5.1e-39 164.9 137 54.7
Rhsim06G0104000 Rhododendron simsii HOM05D007798 ORTHO05D009882 8.6e-39 164.1 137 54.7
Rhsim06G0120600 Rhododendron simsii HOM05D000107 ORTHO05D000062 4.3e-38 161.8 137 54.0
RhsimUnG0041700 Rhododendron simsii HOM05D007798 ORTHO05D009882 5.6e-38 161.4 137 53.3
RhsimUnG0063700 Rhododendron simsii HOM05D000107 ORTHO05D000062 1.6e-37 159.8 137 53.3
Rhsim01G0063300 Rhododendron simsii HOM05D007798 ORTHO05D009882 1.1e-36 157.1 133 57.9
Rhsim02G0156600 Rhododendron simsii HOM05D007798 ORTHO05D009882 5.2e-36 154.8 137 51.8
Rhsim11G0017600 Rhododendron simsii HOM05D007798 ORTHO05D009882 1.3e-31 140.2 110 58.2
Actinidia33688 Actinidia chinensis HOM05D007798 ORTHO05D009882 1.1e-30 137.1 110 54.5
Rhsim11G0005600 Rhododendron simsii HOM05D007798 ORTHO05D009882 2.8e-29 132.5 137 48.2
QL05p075545 Quercus lobata HOM05D007798 ORTHO05D009882 3.6e-29 132.1 137 43.8
QL02p083298 Quercus lobata HOM05D007798 ORTHO05D009882 4.7e-29 131.7 137 43.8
QL05p078054 Quercus lobata HOM05D007798 ORTHO05D009882 4.7e-29 131.7 137 44.5
QL05p006610 Quercus lobata HOM05D007798 ORTHO05D009882 6.8e-28 127.9 137 43.1
Rhsim11G0015900 Rhododendron simsii HOM05D007798 ORTHO05D009882 1.2e-27 127.1 108 50.9
QL04p082690 Quercus lobata HOM05D007798 ORTHO05D009882 2.6e-27 125.9 137 41.6
Actinidia04231 Actinidia chinensis HOM05D007798 ORTHO05D009882 9.3e-25 117.5 136 42.6
Rhsim12G0212200 Rhododendron simsii HOM05D007798 ORTHO05D009882 1.0e-23 114.0 107 53.3
Hma1.2p1_0849F.1_g228030 Hydrangea macrophylla HOM05D007798 ORTHO05D009882 5.1e-23 111.7 133 40.6
Rhsim09G0073700 Rhododendron simsii HOM05D007798 ORTHO05D009882 4.8e-21 105.1 85 58.8
CSS0021921 Camellia sinensis var. sinensis HOM05D007798 ORTHO05D009882 4.4e-19 98.6 63 77.8
RhsimUnG0235000 Rhododendron simsii HOM05D007798 ORTHO05D009882 5.8e-19 98.2 89 53.9
Rhsim02G0157700 Rhododendron simsii HOM05D000107 ORTHO05D000062 1.3e-18 97.1 77 54.5
CSS0004734 Camellia sinensis var. sinensis HOM05D007798 ORTHO05D009882 1.7e-18 96.7 71 70.4
Actinidia03841 Actinidia chinensis HOM05D007798 ORTHO05D009882 2.4e-17 92.8 87 48.3
vmacro12525 Vaccinium macrocarpon HOM05D007798 ORTHO05D009882 3.2e-17 92.4 88 47.7
Hma1.2p1_0613F.1_g189140 Hydrangea macrophylla HOM05D007798 ORTHO05D009882 4.2e-17 92.0 92 45.7
Actinidia07485 Actinidia chinensis HOM05D007798 ORTHO05D009882 5.1e-15 85.1 79 44.3
Rhsim05G0057700 Rhododendron simsii HOM05D007798 ORTHO05D009882 4.3e-14 82.0 77 51.9
Rhsim11G0003100 Rhododendron simsii HOM05D007798 ORTHO05D009882 4.3e-14 82.0 60 58.3
Rhsim09G0076000 Rhododendron simsii HOM05D000107 ORTHO05D000062 1.3e-13 80.5 62 58.1
CSS0035454 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D015543 6.2e-13 78.2 73 52.1
Rhsim03G0114400 Rhododendron simsii HOM05D007798 ORTHO05D009882 5.3e-12 75.1 60 56.7
CSS0032723 Camellia sinensis var. sinensis HOM05D007798 ORTHO05D009882 9.0e-12 74.3 39 87.2
vmacro17806 Vaccinium macrocarpon HOM05D008549 ORTHO05D010234 2.6e-11 72.8 129 32.6
vmacro23182 Vaccinium macrocarpon HOM05D008549 ORTHO05D010234 2.6e-11 72.8 129 32.6
Actinidia38754 Actinidia chinensis HOM05D007798 ORTHO05D009882 1.7e-10 70.1 75 41.3
vmacro07116 Vaccinium macrocarpon HOM05D001028 ORTHO05D000827 5.5e-09 65.1 56 51.8
Rhsim10G0213800 Rhododendron simsii HOM05D008549 ORTHO05D010234 3.5e-08 62.4 129 27.1
Rhsim09G0060200 Rhododendron simsii HOM05D008549 ORTHO05D010234 6.0e-08 61.6 124 28.2
MBI13_g12520_MAGBIO Magnolia biondii HOM05D000791 ORTHO05D000669 7.9e-08 61.2 131 30.5
CSS0011214 Camellia sinensis var. sinensis HOM05D017353 ORTHO05D009882 1.0e-07 60.8 69 46.4
MBI12_g43234_MAGBIO Magnolia biondii HOM05D000791 ORTHO05D000669 1.3e-07 60.5 131 29.8
MBI07_g22513_MAGBIO Magnolia biondii HOM05D000791 ORTHO05D000669 2.3e-07 59.7 133 27.8
MBI19_g18856_MAGBIO Magnolia biondii HOM05D000791 ORTHO05D000669 5.1e-07 58.5 131 28.2
QL93p0053_0646 Quercus lobata HOM05D007798 ORTHO05D009882 5.1e-07 58.5 85 35.3
Rhsim09G0047300 Rhododendron simsii HOM05D000107 ORTHO05D000062 5.1e-07 58.5 128 28.9
MBI05_g43492_MAGBIO Magnolia biondii HOM05D000791 ORTHO05D000669 8.7e-07 57.8 140 27.9
MBI18_g17722_MAGBIO Magnolia biondii HOM05D000791 ORTHO05D000669 1.1e-06 57.4 113 29.2
CSS0044986 Camellia sinensis var. sinensis HOM05D017353 ORTHO05D009882 2.5e-06 56.2 58 48.3
Hma1.2p1_0101F.1_g049380 Hydrangea macrophylla HOM05D005507 ORTHO05D009882 3.3e-06 55.8 45 46.7
Rhsim04G0116500 Rhododendron simsii HOM05D008549 ORTHO05D010234 4.3e-06 55.5 109 25.7
MBI15_g13723_MAGBIO Magnolia biondii HOM05D000791 ORTHO05D000669 7.4e-06 54.7 131 27.5
MBI19_g01025_MAGBIO Magnolia biondii HOM05D000791 ORTHO05D000669 7.4e-06 54.7 131 26.7
MBI19_g27593_MAGBIO Magnolia biondii HOM05D000791 ORTHO05D000669 7.4e-06 54.7 131 26.7
MBI12_g38023_MAGBIO Magnolia biondii HOM05D000791 ORTHO05D000669 9.6e-06 54.3 112 31.2
MBI15_g15098_MAGBIO Magnolia biondii HOM05D000791 ORTHO05D000669 9.6e-06 54.3 131 28.2


User provided reference genes

Program Settings