Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0026407 Camellia sinensis var. sinensis HOM05D000318 ORTHO05D009141 3.4e-74 281.6 142 100.0
Cc08_g14340 Coffea canephora HOM05D000318 ORTHO05D009141 3.8e-25 118.6 117 54.7
Rhsim02G0223600 Rhododendron simsii HOM05D005566 ORTHO05D007534 1.1e-24 117.1 120 55.0
PGR031G2759 Punica granatum HOM05D000318 ORTHO05D009141 4.2e-24 115.2 120 52.5
Actinidia14545 Actinidia chinensis HOM05D000318 ORTHO05D009141 7.2e-24 114.4 120 53.3
CSS0008231 Camellia sinensis var. sinensis HOM05D000318 ORTHO05D009141 7.2e-24 114.4 117 54.7
Actinidia02023 Actinidia chinensis HOM05D000318 ORTHO05D009141 9.4e-24 114.0 120 53.3
SalBow1G5358 Salvia bowleyana HOM05D000318 ORTHO05D009141 9.4e-24 114.0 120 53.3
Atru.chr13.1694 Acer truncatum HOM05D000318 ORTHO05D009141 1.6e-23 113.2 117 54.7
MSTRG.1881 Avicennia marina HOM05D000318 ORTHO05D009141 1.6e-23 113.2 120 50.8
GSVIVG01019805001 Vitis vinifera HOM05D000318 ORTHO05D009141 1.6e-23 113.2 120 51.7
Haze_08894 Corylus avellana HOM05D000318 ORTHO05D009141 2.1e-23 112.8 120 51.7
HanXRQChr03g0086561 Helianthus annuus HOM05D000318 ORTHO05D009141 3.6e-23 112.1 117 55.6
QL12p018081 Quercus lobata HOM05D000318 ORTHO05D009141 3.6e-23 112.1 120 50.8
Eucgr.E00568 Eucalyptus grandis HOM05D000318 ORTHO05D009141 4.7e-23 111.7 120 51.7
CSS0012007 Camellia sinensis var. sinensis HOM05D000318 ORTHO05D009141 6.1e-23 111.3 133 50.4
CANSAT21G2466 Cannabis sativa HOM05D000318 ORTHO05D009141 6.1e-23 111.3 120 51.7
Lj8A233G54 Lonicera japonica HOM05D000318 ORTHO05D009141 8.0e-23 110.9 120 50.8
vmacro11304 Vaccinium macrocarpon HOM05D000318 ORTHO05D009141 8.0e-23 110.9 131 48.9
CiPaw.12G095400 Carya illinoinensis HOM05D000318 ORTHO05D009141 1.4e-22 110.2 120 50.8
FvH4_5g01944 Fragaria vesca HOM05D000318 ORTHO05D009141 1.4e-22 110.2 120 49.2
FAN18G1004 Fragaria x ananassa HOM05D005566 ORTHO05D007534 1.4e-22 110.2 120 49.2
MELO3C005652.2 Cucumis melo HOM05D000318 ORTHO05D009141 1.8e-22 109.8 117 50.4
CsaV3_5G003020 Cucumis sativus L. HOM05D005566 ORTHO05D007534 1.8e-22 109.8 117 50.4
MBI17_g08174_MAGBIO Magnolia biondii HOM05D000318 ORTHO05D009141 1.8e-22 109.8 120 51.7
COL.COLO4_34426 Corchorus olitorius HOM05D005566 ORTHO05D007534 3.0e-22 109.0 120 48.3
Manes.02G024300 Manihot esculenta HOM05D000318 ORTHO05D009141 3.0e-22 109.0 120 53.3
RcHm_v2.0_Chr7g0198441 Rosa chinensis HOM05D000318 ORTHO05D009141 4.0e-22 108.6 120 48.3
FAN08G2943 Fragaria x ananassa HOM05D005566 ORTHO05D007534 8.8e-22 107.5 120 47.5
Nn6g33533 Nelumbo nucifera HOM05D000318 ORTHO05D009141 8.8e-22 107.5 120 47.5
Potri.001G107200 Populus trichocarpa HOM05D000318 ORTHO05D009141 1.2e-21 107.1 120 51.7
Sed0021933 Sechium edule HOM05D000318 ORTHO05D009141 1.2e-21 107.1 117 49.6
TWI15G0460 Tripterygium wilfordii HOM05D000318 ORTHO05D009141 1.2e-21 107.1 120 50.0
Duzib205G0400 Durio zibethinus HOM05D000318 ORTHO05D009141 1.5e-21 106.7 135 44.4
Gohir.A08G180000 Gossypium hirsutum HOM05D000318 ORTHO05D009141 1.5e-21 106.7 120 46.7
Ciclev10021645m.g Citrus clementina HOM05D000318 ORTHO05D009141 2.0e-21 106.3 120 49.2
Migut.E01113 Erythranthe guttata HOM05D000318 ORTHO05D009141 2.0e-21 106.3 120 46.7
Nitab4.5_0008905g0050 Nicotiana tabacum HOM05D000318 ORTHO05D009141 2.0e-21 106.3 120 47.5
Phvul.002G287500 Phaseolus vulgaris HOM05D000318 ORTHO05D009141 2.0e-21 106.3 120 50.8
Sabra01G0081200 Salix brachista HOM05D000318 ORTHO05D009141 2.0e-21 106.3 120 50.8
Aa31LG2G710 Aethionema arabicum HOM05D000318 ORTHO05D007251 2.6e-21 105.9 120 50.8
Gorai.004G209600 Gossypium raimondii HOM05D000318 ORTHO05D009141 2.6e-21 105.9 120 45.8
Peaxi162Scf00714g00122 Petunia axillaris HOM05D000318 ORTHO05D009141 2.6e-21 105.9 120 47.5
PGSC0003DMG400003061 Solanum tuberosum HOM05D000318 ORTHO05D009141 2.6e-21 105.9 120 48.3
VMungo0251G0790 Vigna mungo HOM05D000032 ORTHO05D002227 2.6e-21 105.9 120 51.7
ClCG01G002940 Citrullus lanatus HOM05D005566 ORTHO05D007534 3.4e-21 105.5 107 51.4
FAN13G1151 Fragaria x ananassa HOM05D005566 ORTHO05D007534 3.4e-21 105.5 120 46.7
Solyc08g080730.3 Solanum lycopersicum HOM05D000318 ORTHO05D009141 3.4e-21 105.5 120 47.5
Thecc.03G275200 Theobroma cacao HOM05D000318 ORTHO05D009141 3.4e-21 105.5 120 47.5
TAR629G0468 Trochodendron aralioides HOM05D000318 ORTHO05D009141 3.4e-21 105.5 120 48.3
Glyma.08G012500 Glycine max HOM05D000318 ORTHO05D009141 4.4e-21 105.1 108 54.6
Gohir.D08G198800 Gossypium hirsutum HOM05D000318 ORTHO05D009141 4.4e-21 105.1 120 45.8
arahy.Tifrunner.gnm1.ann1.H32RIC Arachis hypogaea HOM05D005566 ORTHO05D007534 5.7e-21 104.8 120 49.2
Cpa.g.sc98.26 Carica papaya HOM05D000318 ORTHO05D009141 5.7e-21 104.8 123 48.8
Duzib084G0779 Durio zibethinus HOM05D000318 ORTHO05D009141 5.7e-21 104.8 117 47.9
Lj4g0013226 Lotus japonicus HOM05D000318 ORTHO05D009141 7.5e-21 104.4 120 48.3
DCAR_004650 Daucus carota HOM05D000318 ORTHO05D009141 9.8e-21 104.0 120 47.5
Lsat_1_v5_gn_6_87160 Lactuca sativa HOM05D000318 ORTHO05D009141 9.8e-21 104.0 117 47.9
Nn1g01430 Nelumbo nucifera HOM05D000318 ORTHO05D009141 9.8e-21 104.0 120 48.3
arahy.Tifrunner.gnm1.ann1.2A0H1U Arachis hypogaea HOM05D000318 ORTHO05D009141 1.3e-20 103.6 120 50.0
MD06G1077800 Malus domestica HOM05D000318 ORTHO05D009141 1.3e-20 103.6 117 47.9
Psat7g034960 Pisum sativum HOM05D000318 ORTHO05D009141 1.3e-20 103.6 120 47.5
Sc22g0000220 Simmondsia chinensis HOM05D000318 ORTHO05D009141 1.3e-20 103.6 117 48.7
Glyma.05G205600 Glycine max HOM05D000318 ORTHO05D009141 1.7e-20 103.2 120 49.2
Hund11491 Selenicereus undatus HOM05D000318 ORTHO05D009141 1.7e-20 103.2 120 45.8
Sopen08g029040 Solanum pennellii HOM05D000318 ORTHO05D009141 2.8e-20 102.4 120 47.5
CAN.G859.11 Capsicum annuum HOM05D000318 ORTHO05D009141 3.7e-20 102.1 120 47.5
Medtr8g097280 Medicago truncatula HOM05D000318 ORTHO05D009141 3.7e-20 102.1 120 45.8
TPR.G12836 Trifolium pratense HOM05D000318 ORTHO05D009141 4.8e-20 101.7 120 45.8
CARHR048150 Cardamine hirsuta HOM05D000318 ORTHO05D009141 1.1e-19 100.5 120 48.3
Thhalv10023642m.g Eutrema salsugineum HOM05D000318 ORTHO05D009141 1.1e-19 100.5 120 48.3
BcaC06g31942 Brassica carinata HOM05D000318 ORTHO05D009141 1.4e-19 100.1 120 46.7
Ca_17551_v3 Cicer arietinum L. HOM05D000318 ORTHO05D009141 1.4e-19 100.1 120 46.7
HanXRQChr17g0533341 Helianthus annuus HOM05D000318 ORTHO05D009141 1.4e-19 100.1 117 47.0
Ah.12g057310 Amaranthus hybridus HOM05D000318 ORTHO05D009141 1.8e-19 99.8 132 43.9
Aqoxy5G04020 Aquilegia oxysepala HOM05D000318 ORTHO05D009141 2.4e-19 99.4 108 49.1
AL2G11880 Arabidopsis lyrata HOM05D000318 ORTHO05D007251 2.4e-19 99.4 120 49.2
AL2G11970 Arabidopsis lyrata HOM05D000318 ORTHO05D007251 2.4e-19 99.4 120 49.2
AL2G12010 Arabidopsis lyrata HOM05D000318 ORTHO05D009141 2.4e-19 99.4 120 49.2
AT1G63260 Arabidopsis thaliana HOM05D000318 ORTHO05D009141 2.4e-19 99.4 120 49.2
Carub.0002s0156 Capsella rubella HOM05D000318 ORTHO05D009141 2.4e-19 99.4 120 47.5
HPP92_004976 Vanilla planifolia HOM05D000318 ORTHO05D009141 2.4e-19 99.4 117 50.4
BcaC04g22708 Brassica carinata HOM05D000318 ORTHO05D009141 3.1e-19 99.0 120 47.5
A09p13550 Brassica napus HOM05D000318 ORTHO05D009141 3.1e-19 99.0 120 47.5
C09p16060 Brassica napus HOM05D000318 ORTHO05D009141 3.1e-19 99.0 120 47.5
BolC9t54523H Brassica oleracea HOM05D000318 ORTHO05D009141 3.1e-19 99.0 120 47.5
BraA09t37006Z Brassica rapa HOM05D000318 ORTHO05D009141 3.1e-19 99.0 120 47.5
Sp2g01260 Schrenkiella parvula HOM05D000318 ORTHO05D009141 3.1e-19 99.0 120 47.5
ECA246G3976 Erigeron canadensis HOM05D000318 ORTHO05D009141 4.1e-19 98.6 108 47.2
AUR62010606 Chenopodium quinoa HOM05D000318 ORTHO05D009141 9.1e-19 97.4 120 45.0
AUR62017247 Chenopodium quinoa HOM05D000318 ORTHO05D009141 1.2e-18 97.1 107 48.6
Os10g0503600 Oryza sativa ssp. japonica HOM05D000318 ORTHO05D009141 1.2e-18 97.1 120 43.3
Lalb_Chr05g0224931 Lupinus albus HOM05D000318 ORTHO05D009141 1.6e-18 96.7 120 47.5
SEGI_21294 Sequoiadendron giganteum HOM05D000318 ORTHO05D009141 1.6e-18 96.7 108 49.1
EL10Ac5g12768 Beta vulgaris HOM05D000318 ORTHO05D009141 1.0e-17 94.0 120 42.5
PSO063G4890 Papaver somniferum HOM05D000318 ORTHO05D009141 2.9e-17 92.4 121 43.8
Lsat_1_v5_gn_9_44660 Lactuca sativa HOM05D000318 ORTHO05D009141 5.0e-17 91.7 105 46.7
PSO782G3853 Papaver somniferum HOM05D000318 ORTHO05D009141 1.1e-16 90.5 121 43.8
Zm00001eb044140 Zea mays HOM05D000318 ORTHO05D009141 3.3e-16 89.0 120 38.3
PSO143G0001 Papaver somniferum HOM05D000318 ORTHO05D009141 7.2e-16 87.8 106 46.2
Nitab4.5_0001356g0040 Nicotiana tabacum HOM05D000318 ORTHO05D009141 3.4e-13 79.0 41 78.0
arahy.Tifrunner.gnm1.ann1.8RU08H Arachis hypogaea HOM05D005566 ORTHO05D007534 2.8e-12 75.9 120 40.0
Medtr8g097250 Medicago truncatula HOM05D000318 ORTHO05D009141 3.7e-12 75.5 104 41.3
HanXRQChr02g0058991 Helianthus annuus HOM05D000318 ORTHO05D009141 4.1e-11 72.0 104 41.3
HanXRQChr14g0455261 Helianthus annuus HOM05D000318 ORTHO05D009141 1.2e-10 70.5 104 39.4
ECA240G2842 Erigeron canadensis HOM05D000318 ORTHO05D009141 3.5e-10 68.9 95 47.4
SMO118G0270 Selaginella moellendorffii HOM05D000318 ORTHO05D009141 1.1e-08 63.9 108 36.1
AagrBONN_evm.TU.Sc2ySwM_228.5548 Anthoceros agrestis HOM05D000318 ORTHO05D009141 4.7e-07 58.5 109 33.0


User provided reference genes

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