Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0026389 Camellia sinensis var. sinensis HOM05D007037 ORTHO05D006691 1.0e-38 162.9 84 100.0
Dinv13899 Davidia involucrata HOM05D001191 ORTHO05D000979 2.1e-23 112.1 85 71.8
Oeu025269.1 Olea europaea HOM05D007037 ORTHO05D006691 1.3e-20 102.8 81 70.4
CSS0006945 Camellia sinensis var. sinensis HOM05D007037 ORTHO05D006691 1.7e-20 102.4 85 72.9
Nitab4.5_0009030g0010 Nicotiana tabacum HOM05D007037 ORTHO05D006691 4.1e-19 97.8 82 64.6
Nitab4.5_0000005g0340 Nicotiana tabacum HOM05D007037 ORTHO05D006691 1.6e-18 95.9 82 63.4
DCAR_008156 Daucus carota HOM05D007037 ORTHO05D006691 7.8e-18 93.6 83 66.3
Hma1.2p1_0749F.1_g212630 Hydrangea macrophylla HOM05D007037 ORTHO05D006691 7.8e-18 93.6 81 65.4
Hma1.2p1_0749F.1_g212635 Hydrangea macrophylla HOM05D007037 ORTHO05D006691 7.8e-18 93.6 81 65.4
Peaxi162Scf00331g00119 Petunia axillaris HOM05D007037 ORTHO05D006691 7.8e-18 93.6 82 62.2
MD10G1322200 Malus domestica HOM05D007037 ORTHO05D006691 1.7e-17 92.4 79 62.0
Nitab4.5_0005074g0010 Nicotiana tabacum HOM05D007037 ORTHO05D006691 2.3e-17 92.0 81 59.3
Prupe.4G019700 Prunus persica HOM05D007037 ORTHO05D006691 3.9e-17 91.3 79 62.0
TAR624G1029 Trochodendron aralioides HOM05D007037 ORTHO05D006691 3.9e-17 91.3 88 62.5
QL05p073032 Quercus lobata HOM05D007037 ORTHO05D006691 6.6e-17 90.5 82 59.8
RcHm_v2.0_Chr5g0002881 Rosa chinensis HOM05D007037 ORTHO05D006691 6.6e-17 90.5 80 58.8
CiPaw.09G092600 Carya illinoinensis HOM05D007037 ORTHO05D006691 1.1e-16 89.7 77 63.6
MD05G1347800 Malus domestica HOM05D007037 ORTHO05D006691 1.9e-16 89.0 79 60.8
Nitab4.5_0002827g0030 Nicotiana tabacum HOM05D007037 ORTHO05D006691 4.3e-16 87.8 81 55.6
FAN21G2981 Fragaria x ananassa HOM05D001191 ORTHO05D000979 9.5e-16 86.7 80 57.5
Potri.011G004400 Populus trichocarpa HOM05D007037 ORTHO05D006691 1.2e-15 86.3 77 59.7
Manes.16G006400 Manihot esculenta HOM05D007037 ORTHO05D006691 1.6e-15 85.9 77 57.1
Thecc.06G221700 Theobroma cacao HOM05D007037 ORTHO05D006691 1.6e-15 85.9 77 59.7
FAN25G2740 Fragaria x ananassa HOM05D007037 ORTHO05D006691 2.1e-15 85.5 80 57.5
Atru.chr10.2236 Acer truncatum HOM05D007037 ORTHO05D006691 4.7e-15 84.3 80 56.2
Cc09_g01610 Coffea canephora HOM05D007037 ORTHO05D006691 8.1e-15 83.6 81 54.3
Eucgr.E04050 Eucalyptus grandis HOM05D007037 ORTHO05D006691 8.1e-15 83.6 77 57.1
Manes.01G159201 Manihot esculenta HOM05D007037 ORTHO05D006691 8.1e-15 83.6 77 55.8
Gohir.A05G170900 Gossypium hirsutum HOM05D007037 ORTHO05D006691 1.1e-14 83.2 77 57.1
Potri.004G013601 Populus trichocarpa HOM05D007037 ORTHO05D006691 1.1e-14 83.2 77 55.8
Duzib192G0147 Durio zibethinus HOM05D007037 ORTHO05D006691 2.4e-14 82.0 81 56.8
Gorai.009G179200 Gossypium raimondii HOM05D007037 ORTHO05D006691 6.8e-14 80.5 77 57.1
Sopen02g025300 Solanum pennellii HOM05D007037 ORTHO05D006691 6.8e-14 80.5 78 55.1
ECA234G0681 Erigeron canadensis HOM05D007037 ORTHO05D006691 1.5e-13 79.3 84 56.0
Lsat_1_v5_gn_4_60821 Lactuca sativa HOM05D007037 ORTHO05D006691 1.5e-13 79.3 82 57.3
PGSC0003DMG400016450 Solanum tuberosum HOM05D007037 ORTHO05D006691 1.5e-13 79.3 82 51.2
COL.COLO4_00342 Corchorus olitorius HOM05D007037 ORTHO05D006691 2.6e-13 78.6 82 54.9
Gohir.D05G173900 Gossypium hirsutum HOM05D007037 ORTHO05D006691 4.4e-13 77.8 84 54.8
Sopen02g011150 Solanum pennellii HOM05D007037 ORTHO05D006691 5.8e-13 77.4 77 54.5
FvH4_3g01970 Fragaria vesca HOM05D007037 ORTHO05D006691 4.9e-12 74.3 80 51.2
PGSC0003DMG400019869 Solanum tuberosum HOM05D007037 ORTHO05D006691 8.4e-12 73.6 74 55.4
Medtr2g023440 Medicago truncatula HOM05D007037 ORTHO05D006691 1.1e-11 73.2 81 48.1
SalBow8G3366 Salvia bowleyana HOM05D007037 ORTHO05D006691 1.4e-11 72.8 68 61.8
ClCG01G021940 Citrullus lanatus HOM05D007037 ORTHO05D006691 4.1e-11 71.2 80 55.0
CsaV3_6G049020 Cucumis sativus L. HOM05D007037 ORTHO05D006691 4.1e-11 71.2 80 53.8
Peaxi162Scf01204g00120 Petunia axillaris HOM05D007037 ORTHO05D006691 4.1e-11 71.2 81 51.9
TPR.G13436 Trifolium pratense HOM05D007037 ORTHO05D006691 5.4e-11 70.9 81 46.9
vmacro23211 Vaccinium macrocarpon HOM05D007037 ORTHO05D006691 7.1e-11 70.5 77 54.5
Aqoxy1G02111 Aquilegia oxysepala HOM05D007037 ORTHO05D006691 1.2e-10 69.7 74 52.7
Ca_26471_v3 Cicer arietinum L. HOM05D007037 ORTHO05D006691 1.2e-10 69.7 83 48.2
Migut.M01325 Erythranthe guttata HOM05D007037 ORTHO05D006691 7.8e-10 67.0 81 48.1
Sed0008683 Sechium edule HOM05D007037 ORTHO05D006691 7.8e-10 67.0 80 48.8
Actinidia09718 Actinidia chinensis HOM05D007037 ORTHO05D006691 1.7e-09 65.9 90 46.7
vmacro15807 Vaccinium macrocarpon HOM05D007037 ORTHO05D006691 3.9e-09 64.7 88 47.7
Glyma.09G004000 Glycine max HOM05D007037 ORTHO05D006691 1.1e-08 63.2 81 48.1
EL10Ac8g20067 Beta vulgaris HOM05D007037 ORTHO05D006691 1.5e-08 62.8 77 46.8
Potri.014G153900 Populus trichocarpa HOM05D009550 ORTHO05D006691 1.9e-08 62.4 78 47.4
Sabra11G0003500 Salix brachista HOM05D007037 ORTHO05D006691 1.9e-08 62.4 74 48.6
TAR626G0921 Trochodendron aralioides HOM05D007037 ORTHO05D006691 1.9e-08 62.4 61 60.7
Rhsim02G0106600 Rhododendron simsii HOM05D007037 ORTHO05D006691 3.3e-08 61.6 91 44.0
Glyma.17G012900 Glycine max HOM05D007037 ORTHO05D006691 5.6e-08 60.8 81 44.4
HanXRQChr16g0506491 Helianthus annuus HOM05D007037 ORTHO05D006691 5.6e-08 60.8 83 48.2
Phvul.003G079400 Phaseolus vulgaris HOM05D007037 ORTHO05D006691 5.6e-08 60.8 81 44.4
Sed0010286 Sechium edule HOM05D007037 ORTHO05D006691 7.3e-08 60.5 78 47.4
Gorai.013G189700 Gossypium raimondii HOM05D007037 ORTHO05D006691 1.2e-07 59.7 83 45.8
TPR.G37004 Trifolium pratense HOM05D007037 ORTHO05D006691 1.2e-07 59.7 77 44.2
Cc05_g04380 Coffea canephora HOM05D007037 ORTHO05D006691 1.6e-07 59.3 84 46.4
Gohir.D13G171150 Gossypium hirsutum HOM05D007037 ORTHO05D006691 1.6e-07 59.3 83 48.2
Gohir.D13G171533 Gossypium hirsutum HOM05D007037 ORTHO05D006691 2.1e-07 58.9 81 45.7
Sabra04G0006400 Salix brachista HOM05D007037 ORTHO05D006691 2.1e-07 58.9 77 42.9
CiPaw.10G071700 Carya illinoinensis HOM05D007037 ORTHO05D006691 2.8e-07 58.5 77 42.9
Nn1g07147 Nelumbo nucifera HOM05D009550 ORTHO05D006691 2.8e-07 58.5 88 40.9
Thhalv10009555m.g Eutrema salsugineum HOM05D001191 ORTHO05D000979 3.6e-07 58.2 84 44.0
Sp1g10350 Schrenkiella parvula HOM05D001191 ORTHO05D000979 3.6e-07 58.2 82 48.8
arahy.Tifrunner.gnm1.ann1.98H95S Arachis hypogaea HOM05D007037 ORTHO05D006691 4.7e-07 57.8 77 48.1
Aqoxy4G01827 Aquilegia oxysepala HOM05D009550 ORTHO05D006691 6.2e-07 57.4 82 47.6
Ciclev10018055m.g Citrus clementina HOM05D007037 ORTHO05D006691 6.2e-07 57.4 77 46.8
Psat4g006560 Pisum sativum HOM05D007037 ORTHO05D006691 6.2e-07 57.4 78 50.0
BcaC05g25043 Brassica carinata HOM05D001191 ORTHO05D000979 1.1e-06 56.6 79 45.6
Ca_21080_v3 Cicer arietinum L. HOM05D007037 ORTHO05D006691 1.1e-06 56.6 83 37.3
Haze_06807 Corylus avellana HOM05D007037 ORTHO05D006691 1.1e-06 56.6 81 44.4
Glyma.07G261100 Glycine max HOM05D007037 ORTHO05D006691 1.1e-06 56.6 77 48.1
THA.LOC104823525 Tarenaya hassleriana HOM05D007037 ORTHO05D006691 1.1e-06 56.6 84 42.9
Gohir.D11G101450 Gossypium hirsutum HOM05D007037 ORTHO05D006691 1.4e-06 56.2 80 45.0
Gorai.007G108200 Gossypium raimondii HOM05D007037 ORTHO05D006691 1.4e-06 56.2 80 45.0
Carub.0001s1138 Capsella rubella HOM05D007037 ORTHO05D006691 1.8e-06 55.8 83 42.2
Cfa000214 Carpinus fangiana HOM05D007037 ORTHO05D006691 2.4e-06 55.5 80 43.8
Lj4g0019440 Lotus japonicus HOM05D007037 ORTHO05D006691 2.4e-06 55.5 83 41.0
Medtr4g132230 Medicago truncatula HOM05D007037 ORTHO05D006691 2.4e-06 55.5 83 41.0
CiPaw.03G159600 Carya illinoinensis HOM05D007037 ORTHO05D006691 3.1e-06 55.1 82 46.3
CARHR012050 Cardamine hirsuta HOM05D007037 ORTHO05D006691 4.0e-06 54.7 79 44.3
Sp5g13860 Schrenkiella parvula HOM05D003533 ORTHO05D004009 4.0e-06 54.7 79 44.3
C05p09860 Brassica napus HOM05D007037 ORTHO05D006691 5.2e-06 54.3 79 44.3
arahy.Tifrunner.gnm1.ann1.CZMF37 Arachis hypogaea HOM05D007037 ORTHO05D006691 6.9e-06 53.9 76 46.1
A06p08290 Brassica napus HOM05D007037 ORTHO05D006691 6.9e-06 53.9 79 43.0
Lj6g0006723 Lotus japonicus HOM05D007037 ORTHO05D006691 6.9e-06 53.9 80 42.5
Lalb_Chr13g0304241 Lupinus albus HOM05D007037 ORTHO05D006691 6.9e-06 53.9 82 43.9
Lalb_Chr07g0177181 Lupinus albus HOM05D007037 ORTHO05D006691 9.0e-06 53.5 82 43.9
Rhsim13G0153300 Rhododendron simsii HOM05D007037 ORTHO05D006691 9.0e-06 53.5 81 45.7


User provided reference genes

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