Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0026382 Camellia sinensis var. sinensis HOM05D006796 ORTHO05D008615 6.2e-147 524.2 290 100.0
Actinidia19934 Actinidia chinensis HOM05D006796 ORTHO05D008615 6.0e-110 401.4 292 74.3
Nn4g23271 Nelumbo nucifera HOM05D006796 ORTHO05D008615 2.3e-109 399.4 293 72.4
GSVIVG01012496001 Vitis vinifera HOM05D006796 ORTHO05D008615 1.1e-108 397.1 296 71.6
Dinv34092 Davidia involucrata HOM05D006796 ORTHO05D008615 6.9e-106 387.9 317 68.1
CiPaw.07G071700 Carya illinoinensis HOM05D006796 ORTHO05D008615 3.4e-105 385.6 293 70.3
Manes.05G105900 Manihot esculenta HOM05D006796 ORTHO05D008615 7.6e-105 384.4 295 70.5
TAR371G0712 Trochodendron aralioides HOM05D006796 ORTHO05D008615 8.5e-104 380.9 295 68.8
Thecc.02G339900 Theobroma cacao HOM05D006796 ORTHO05D008615 1.9e-103 379.8 294 70.1
Haze_11961 Corylus avellana HOM05D006796 ORTHO05D008615 4.2e-103 378.6 311 67.5
Atru.chr11.1722 Acer truncatum HOM05D006796 ORTHO05D008615 2.7e-102 375.9 292 70.5
Lj3A1033T56 Lonicera japonica HOM05D006796 ORTHO05D008615 1.0e-101 374.0 292 69.9
arahy.Tifrunner.gnm1.ann1.R8NX8D Arachis hypogaea HOM05D006796 ORTHO05D008615 3.0e-101 372.5 293 66.9
arahy.Tifrunner.gnm1.ann1.NP20FV Arachis hypogaea HOM05D006796 ORTHO05D008615 3.9e-101 372.1 293 66.9
TWI31G0717 Tripterygium wilfordii HOM05D006796 ORTHO05D008615 5.1e-101 371.7 288 69.4
TAR629G0550 Trochodendron aralioides HOM05D006796 ORTHO05D008615 3.3e-100 369.0 290 66.9
Gorai.012G186400 Gossypium raimondii HOM05D006796 ORTHO05D008615 4.3e-100 368.6 301 67.4
Gohir.D04G191000 Gossypium hirsutum HOM05D006796 ORTHO05D008615 9.7e-100 367.5 301 67.4
Nitab4.5_0000391g0260 Nicotiana tabacum HOM05D006796 ORTHO05D008615 6.3e-99 364.8 298 69.8
Duzib268G1785 Durio zibethinus HOM05D006796 ORTHO05D008615 8.2e-99 364.4 299 67.6
Potri.010G164400 Populus trichocarpa HOM05D006796 ORTHO05D008615 8.2e-99 364.4 297 68.0
VMungo1215G0648 Vigna mungo HOM05D006796 ORTHO05D008615 1.1e-98 364.0 291 69.4
Phvul.002G103200 Phaseolus vulgaris HOM05D006796 ORTHO05D008615 1.4e-98 363.6 291 69.4
FAN07G2185 Fragaria x ananassa HOM05D006796 ORTHO05D008615 3.1e-98 362.5 292 68.8
Eucgr.B03198 Eucalyptus grandis HOM05D006796 ORTHO05D008615 4.1e-98 362.1 284 68.7
Glyma.01G052700 Glycine max HOM05D006796 ORTHO05D008615 1.2e-97 360.5 292 68.8
Lj2g0006920 Lotus japonicus HOM05D006796 ORTHO05D008615 1.2e-97 360.5 294 66.3
Sabra10G0124800 Salix brachista HOM05D006796 ORTHO05D008615 1.7e-96 356.7 298 67.1
PGR102G1583 Punica granatum HOM05D006796 ORTHO05D008615 3.8e-96 355.5 288 67.0
Glyma.02G111300 Glycine max HOM05D006796 ORTHO05D008615 1.1e-95 354.0 291 68.7
PGSC0003DMG400028345 Solanum tuberosum HOM05D006796 ORTHO05D008615 1.1e-95 354.0 298 66.4
CsaV3_5G022970 Cucumis sativus L. HOM05D006796 ORTHO05D008615 1.4e-95 353.6 230 77.4
FvH4_4g30770 Fragaria vesca HOM05D006796 ORTHO05D008615 1.9e-95 353.2 294 67.3
FAN12G1163 Fragaria x ananassa HOM05D006796 ORTHO05D008615 1.9e-95 353.2 294 67.3
Ca_04876_v3 Cicer arietinum L. HOM05D006796 ORTHO05D008615 2.5e-95 352.8 292 66.1
FAN22G2031 Fragaria x ananassa HOM05D006796 ORTHO05D008615 4.2e-95 352.1 294 67.3
CAN.G964.30 Capsicum annuum HOM05D006796 ORTHO05D008615 5.5e-95 351.7 224 79.5
Gohir.D04G190901 Gossypium hirsutum HOM05D006796 ORTHO05D008615 5.5e-95 351.7 294 66.3
Psat2g126440 Pisum sativum HOM05D006796 ORTHO05D008615 7.2e-95 351.3 292 66.8
ClCG09G022060 Citrullus lanatus HOM05D006796 ORTHO05D008615 9.4e-95 350.9 233 76.0
MSTRG.13431 Avicennia marina HOM05D006796 ORTHO05D008615 2.1e-94 349.7 302 67.2
Cc11_g12630 Coffea canephora HOM05D006796 ORTHO05D008615 3.6e-94 349.0 304 65.5
Lalb_Chr10g0098461 Lupinus albus HOM05D006796 ORTHO05D008615 3.6e-94 349.0 203 85.2
Ciclev10032381m.g Citrus clementina HOM05D006796 ORTHO05D008615 6.1e-94 348.2 292 66.8
Hma1.2p1_0354F.1_g133830 Hydrangea macrophylla HOM05D006796 ORTHO05D008615 7.9e-94 347.8 203 85.7
Sopen05g007830 Solanum pennellii HOM05D006796 ORTHO05D008615 3.0e-93 345.9 296 64.5
Cpa.g.sc1.63 Carica papaya HOM05D006796 ORTHO05D008615 3.9e-93 345.5 286 67.5
CiPaw.05G129900 Carya illinoinensis HOM05D006796 ORTHO05D008615 1.5e-92 343.6 294 73.8
Peaxi162Scf00222g00236 Petunia axillaris HOM05D006796 ORTHO05D008615 2.0e-92 343.2 289 67.5
RcHm_v2.0_Chr4g0439161 Rosa chinensis HOM05D006796 ORTHO05D008615 7.4e-92 341.3 295 65.4
Prupe.1G279300 Prunus persica HOM05D006796 ORTHO05D008615 1.7e-91 340.1 248 71.4
QL03p069702 Quercus lobata HOM05D006796 ORTHO05D008615 3.7e-91 339.0 380 53.2
TPR.G19931 Trifolium pratense HOM05D006796 ORTHO05D008615 3.7e-91 339.0 294 63.9
Lsat_1_v5_gn_4_10660 Lactuca sativa HOM05D006796 ORTHO05D008615 6.3e-91 338.2 297 66.7
CANSAT64G1871 Cannabis sativa HOM05D006796 ORTHO05D008615 1.8e-90 336.7 298 63.8
MELO3C002984.2 Cucumis melo HOM05D006796 ORTHO05D008615 2.4e-90 336.3 333 58.3
SalBow8G2627 Salvia bowleyana HOM05D006796 ORTHO05D008615 4.1e-90 335.5 219 79.5
Hund25209 Selenicereus undatus HOM05D006796 ORTHO05D008615 4.1e-90 335.5 216 80.1
Migut.L01249 Erythranthe guttata HOM05D006796 ORTHO05D008615 9.1e-90 334.3 293 66.2
EL10Ac6g13260 Beta vulgaris HOM05D006796 ORTHO05D008615 1.5e-89 333.6 285 64.2
Cfa008932 Carpinus fangiana HOM05D006796 ORTHO05D008615 2.6e-89 332.8 420 50.2
Sc11g0002140 Simmondsia chinensis HOM05D006796 ORTHO05D008615 1.7e-88 330.1 220 75.9
MSTRG.2332 Avicennia marina HOM05D006796 ORTHO05D008615 8.5e-88 327.8 229 72.1
Aqoxy3G00482 Aquilegia oxysepala HOM05D006796 ORTHO05D008615 2.7e-86 322.8 304 59.2
AUR62032832 Chenopodium quinoa HOM05D006796 ORTHO05D008615 2.7e-86 322.8 290 62.4
SGA_v2.0_scaffold63G21639 Striga asiatica HOM05D006796 ORTHO05D008615 1.4e-85 320.5 297 66.7
vmacro01347 Vaccinium macrocarpon HOM05D006796 ORTHO05D008615 1.8e-85 320.1 313 59.4
MD16G1067400 Malus domestica HOM05D006796 ORTHO05D008615 3.0e-85 319.3 243 68.3
Oeu055099.3 Olea europaea HOM05D006796 ORTHO05D008615 3.0e-85 319.3 355 56.1
THA.LOC104805179 Tarenaya hassleriana HOM05D006796 ORTHO05D008615 3.0e-85 319.3 289 61.6
CARHR014360 Cardamine hirsuta HOM05D006796 ORTHO05D008615 5.2e-85 318.5 289 62.3
CDE02G1750 Ceratophyllum demersum HOM05D006796 ORTHO05D008615 5.2e-85 318.5 247 66.8
ECA234G4054 Erigeron canadensis HOM05D006796 ORTHO05D008615 2.0e-84 316.6 205 78.0
PSO478G1165 Papaver somniferum HOM05D006796 ORTHO05D008615 1.3e-83 313.9 201 78.1
MD13G1068600 Malus domestica HOM05D006796 ORTHO05D008615 2.8e-83 312.8 199 77.4
PSO017G7370 Papaver somniferum HOM05D006796 ORTHO05D008615 1.1e-82 310.8 201 77.1
Thhalv10008453m.g Eutrema salsugineum HOM05D006796 ORTHO05D008615 2.4e-82 309.7 290 61.0
Aa31LG1G1040 Aethionema arabicum HOM05D006796 ORTHO05D008615 2.2e-80 303.1 329 54.4
COL.COLO4_27978 Corchorus olitorius HOM05D006796 ORTHO05D008615 5.0e-80 302.0 301 59.8
AT1G13990 Arabidopsis thaliana HOM05D006796 ORTHO05D008615 1.1e-79 300.8 290 59.3
AL1G25830 Arabidopsis lyrata HOM05D006796 ORTHO05D008615 1.9e-79 300.1 289 60.6
HPP92_016903 Vanilla planifolia HOM05D006796 ORTHO05D008615 1.6e-78 297.0 227 65.6
C05p11750 Brassica napus HOM05D006796 ORTHO05D008615 2.7e-78 296.2 287 57.5
Carub.0001s1368 Capsella rubella HOM05D006796 ORTHO05D008615 2.7e-78 296.2 299 62.2
BcaC05g25295 Brassica carinata HOM05D006796 ORTHO05D008615 3.0e-77 292.7 290 58.3
BolC5t29921H Brassica oleracea HOM05D006796 ORTHO05D008615 3.0e-77 292.7 312 55.8
ATR0564G337 Amborella trichopoda HOM05D006796 ORTHO05D008615 8.8e-77 291.2 198 74.2
AUR62005838 Chenopodium quinoa HOM05D006796 ORTHO05D008615 1.8e-74 283.5 284 58.5
unitig_8.g3954 Utricularia gibba HOM05D006796 ORTHO05D008615 4.1e-74 282.3 228 64.5
Os03g0168200 Oryza sativa ssp. japonica HOM05D006796 ORTHO05D008615 2.0e-73 280.0 195 70.8
BraA06t24185Z Brassica rapa HOM05D006796 ORTHO05D008615 3.5e-73 279.3 228 65.8
Zm00001eb402440 Zea mays HOM05D006796 ORTHO05D008615 4.5e-73 278.9 198 70.2
HanXRQChr12g0379181 Helianthus annuus HOM05D006796 ORTHO05D008615 6.1e-70 268.5 251 68.1
Sed0012383 Sechium edule HOM05D006796 ORTHO05D008615 2.2e-67 260.0 263 56.3
Nitab4.5_0004906g0020 Nicotiana tabacum HOM05D006796 ORTHO05D008615 3.7e-67 259.2 154 81.8
Mapoly0042s0065 Marchantia polymorpha HOM05D006796 ORTHO05D008615 1.1e-66 257.7 229 59.8
A06p09990 Brassica napus HOM05D006796 ORTHO05D008615 2.8e-62 243.0 238 58.8
arahy.Tifrunner.gnm1.ann1.T4YGUP Arachis hypogaea HOM05D006796 ORTHO05D008615 3.0e-61 239.6 161 75.8
Potri.008G090900 Populus trichocarpa HOM05D006796 ORTHO05D008615 7.0e-58 228.4 189 66.1
Gohir.1Z049816 Gossypium hirsutum HOM05D006796 ORTHO05D008615 7.3e-55 218.4 131 82.4
Actinidia31964 Actinidia chinensis HOM05D006796 ORTHO05D008615 2.8e-54 216.5 133 83.5
Medtr5g042520 Medicago truncatula HOM05D006796 ORTHO05D008615 6.6e-48 195.3 215 54.9
CBR_g41640 Chara braunii HOM05D006796 ORTHO05D008615 4.3e-47 192.6 241 49.0
Rhsim12G0078900 Rhododendron simsii HOM05D006796 ORTHO05D008615 1.2e-46 191.0 404 38.4
SMO271G0176 Selaginella moellendorffii HOM05D006796 ORTHO05D008615 1.5e-44 184.1 211 51.2
Hma1.2p1_0354F.1_g133820 Hydrangea macrophylla HOM05D006796 ORTHO05D008615 1.7e-43 180.6 109 84.4
Solyc05g013060.4 Solanum lycopersicum HOM05D006796 ORTHO05D008615 5.0e-40 169.1 185 55.1
AagrBONN_evm.TU.Sc2ySwM_344.1473 Anthoceros agrestis HOM05D006796 ORTHO05D008615 3.0e-32 143.3 151 53.6
vmacro01341 Vaccinium macrocarpon HOM05D006796 ORTHO05D008615 2.5e-31 140.2 228 43.9
Nn2g13928 Nelumbo nucifera HOM05D006796 ORTHO05D008615 1.2e-28 131.3 96 68.8
CDE09G0941 Ceratophyllum demersum HOM05D006796 ORTHO05D008615 1.1e-26 124.8 80 73.8
SEGI_14917 Sequoiadendron giganteum HOM05D006796 ORTHO05D008615 5.1e-24 115.9 75 76.0
Oeu021077.1 Olea europaea HOM05D006796 ORTHO05D008615 2.5e-23 113.6 291 35.4
Nn2g11199 Nelumbo nucifera HOM05D006796 ORTHO05D008615 1.8e-13 80.9 61 67.2
PRCOL_00001264 Prasinoderma coloniale HOM05D006796 ORTHO05D008615 1.5e-12 77.8 222 30.2
Gohir.A12G247950 Gossypium hirsutum HOM05D006796 ORTHO05D008615 9.9e-12 75.1 78 52.6
SalBow1G4829 Salvia bowleyana HOM05D006796 ORTHO05D000018 1.9e-10 70.9 58 63.8
Ca_27564_v3 Cicer arietinum L. HOM05D003588 ORTHO05D004252 7.4e-07 58.9 38 71.1
Ca_04476_v3 Cicer arietinum L. HOM05D003588 ORTHO05D004252 1.6e-06 57.8 38 71.1
Ca_28040_v3 Cicer arietinum L. HOM05D006796 ORTHO05D008615 2.1e-06 57.4 37 67.6
Ca_03868_v3 Cicer arietinum L. HOM05D000047 ORTHO05D000044 3.7e-06 56.6 41 63.4


User provided reference genes

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