Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0026374 Camellia sinensis var. sinensis HOM05D006074 ORTHO05D008728 5.4e-198 694.1 350 100.0
CSS0024892 Camellia sinensis var. sinensis HOM05D006074 ORTHO05D008728 8.2e-186 653.7 366 92.9
CSS0026498 Camellia sinensis var. sinensis HOM05D006074 ORTHO05D008728 1.2e-184 649.8 365 92.6
CSS0037615 Camellia sinensis var. sinensis HOM05D006074 ORTHO05D008728 8.7e-172 607.1 369 87.0
Actinidia02708 Actinidia chinensis HOM05D006074 ORTHO05D008728 1.5e-163 579.7 364 82.4
vmacro18203 Vaccinium macrocarpon HOM05D006074 ORTHO05D008728 6.1e-157 557.8 366 79.2
Rhsim08G0067900 Rhododendron simsii HOM05D006074 ORTHO05D008728 2.3e-156 555.8 367 79.3
Dinv33738 Davidia involucrata HOM05D006074 ORTHO05D008728 5.3e-153 544.7 348 79.9
Hma1.2p1_0449F.1_g155300 Hydrangea macrophylla HOM05D006074 ORTHO05D008728 2.0e-152 542.7 364 75.8
TAR622G0709 Trochodendron aralioides HOM05D006074 ORTHO05D008728 7.5e-147 524.2 361 74.2
TAR729G0002 Trochodendron aralioides HOM05D006074 ORTHO05D008728 7.5e-147 524.2 361 74.2
QL02p081203 Quercus lobata HOM05D006074 ORTHO05D008728 1.8e-145 519.6 361 73.7
FAN02G2663 Fragaria x ananassa HOM05D006074 ORTHO05D008728 2.4e-145 519.2 363 73.6
Lju41C23G10 Lonicera japonica HOM05D006074 ORTHO05D008728 3.1e-145 518.8 368 74.5
GSVIVG01011374001 Vitis vinifera HOM05D006074 ORTHO05D008728 9.1e-145 517.3 361 73.4
MBI02_g10680_MAGBIO Magnolia biondii HOM05D006074 ORTHO05D008728 7.7e-144 514.2 361 72.3
RcHm_v2.0_Chr2g0168871 Rosa chinensis HOM05D006074 ORTHO05D008728 2.9e-143 512.3 363 72.5
CiPaw.03G029000 Carya illinoinensis HOM05D006074 ORTHO05D008728 5.0e-143 511.5 361 72.3
Potri.017G080300 Populus trichocarpa HOM05D006074 ORTHO05D008728 1.1e-142 510.4 361 73.4
Sabra17G0072000 Salix brachista HOM05D006074 ORTHO05D008728 1.5e-142 510.0 361 72.3
Migut.H00904 Erythranthe guttata HOM05D006074 ORTHO05D008728 2.5e-142 509.2 362 71.0
FvH4_6g49080 Fragaria vesca HOM05D006074 ORTHO05D008728 2.5e-142 509.2 363 72.2
Oeu060929.1 Olea europaea HOM05D006074 ORTHO05D008728 3.2e-142 508.8 362 72.1
MD09G1048800 Malus domestica HOM05D006074 ORTHO05D008728 7.2e-142 507.7 361 71.2
Psat1g075640 Pisum sativum HOM05D006074 ORTHO05D008728 9.4e-142 507.3 361 72.9
Medtr1g039990 Medicago truncatula HOM05D006074 ORTHO05D008728 1.2e-141 506.9 361 72.3
Prupe.3G270100 Prunus persica HOM05D006074 ORTHO05D008728 1.6e-141 506.5 363 71.3
Phvul.004G027100 Phaseolus vulgaris HOM05D006074 ORTHO05D008728 8.8e-140 500.7 361 72.3
PSO832G2479 Papaver somniferum HOM05D006074 ORTHO05D008728 1.2e-139 500.4 363 70.5
Duzib187G1598 Durio zibethinus HOM05D006074 ORTHO05D008728 3.4e-139 498.8 366 69.7
Lalb_Chr21g0318901 Lupinus albus HOM05D006074 ORTHO05D008728 7.5e-139 497.7 361 70.4
Aqoxy3G03321 Aquilegia oxysepala HOM05D006074 ORTHO05D008728 1.3e-138 496.9 361 70.4
Sopen03g012680 Solanum pennellii HOM05D006074 ORTHO05D008728 1.7e-138 496.5 362 70.2
Thecc.04G099800 Theobroma cacao HOM05D006074 ORTHO05D008728 6.3e-138 494.6 361 70.1
CAN.G579.8 Capsicum annuum HOM05D006074 ORTHO05D008728 1.1e-137 493.8 363 70.0
Lj2g0007765 Lotus japonicus HOM05D006074 ORTHO05D008728 1.1e-137 493.8 361 70.9
ClCG10G014940 Citrullus lanatus HOM05D006074 ORTHO05D008728 1.4e-137 493.4 363 70.0
PSO591G0110 Papaver somniferum HOM05D006074 ORTHO05D008728 3.1e-137 492.3 363 69.1
Solyc03g058860.3 Solanum lycopersicum HOM05D006074 ORTHO05D008728 7.0e-137 491.1 362 69.6
arahy.Tifrunner.gnm1.ann1.V4TPJI Arachis hypogaea HOM05D006074 ORTHO05D008728 2.0e-136 489.6 363 69.7
PGSC0003DMG400009217 Solanum tuberosum HOM05D006074 ORTHO05D008728 2.7e-136 489.2 362 69.1
arahy.Tifrunner.gnm1.ann1.1Y4ZQN Arachis hypogaea HOM05D006074 ORTHO05D008728 3.5e-136 488.8 363 69.7
CsaV3_3G041590 Cucumis sativus L. HOM05D006074 ORTHO05D008728 3.5e-136 488.8 363 69.1
SalBow1G4287 Salvia bowleyana HOM05D006074 ORTHO05D008728 4.5e-136 488.4 362 68.5
ATR0564G024 Amborella trichopoda HOM05D006074 ORTHO05D008728 1.0e-135 487.3 364 69.0
HanXRQChr09g0265461 Helianthus annuus HOM05D006074 ORTHO05D008728 1.7e-135 486.5 362 69.9
Lsat_1_v5_gn_4_177200 Lactuca sativa HOM05D006074 ORTHO05D008728 2.9e-135 485.7 364 70.1
Gohir.A07G215200 Gossypium hirsutum HOM05D006074 ORTHO05D008728 8.6e-135 484.2 364 68.1
MELO3C009883.2 Cucumis melo HOM05D006074 ORTHO05D008728 9.5e-134 480.7 361 69.0
VMungo0464G0585 Vigna mungo HOM05D006074 ORTHO05D008728 1.2e-133 480.3 343 72.6
Cc07_g03180 Coffea canephora HOM05D006074 ORTHO05D008728 6.1e-133 478.0 362 69.9
COL.COLO4_36112 Corchorus olitorius HOM05D006074 ORTHO05D008728 1.8e-132 476.5 367 69.8
PGR083G0972 Punica granatum HOM05D006074 ORTHO05D008728 1.8e-132 476.5 364 68.7
Gorai.001G256400 Gossypium raimondii HOM05D006074 ORTHO05D008728 1.5e-131 473.4 398 62.8
CANSAT64G1183 Cannabis sativa HOM05D006074 ORTHO05D008728 2.0e-131 473.0 361 67.6
CANSAT64G2140 Cannabis sativa HOM05D006074 ORTHO05D008728 7.5e-131 471.1 361 68.1
Eucgr.J01218 Eucalyptus grandis HOM05D006074 ORTHO05D008728 1.7e-130 469.9 362 68.0
DCAR_021653 Daucus carota HOM05D006074 ORTHO05D008728 1.4e-129 466.8 362 67.4
Gohir.D07G222100 Gossypium hirsutum HOM05D006074 ORTHO05D008728 1.4e-129 466.8 364 66.8
Sc14g0005980 Simmondsia chinensis HOM05D006074 ORTHO05D008728 4.1e-129 465.3 361 68.1
THA.LOC104823933 Tarenaya hassleriana HOM05D006074 ORTHO05D008728 7.0e-129 464.5 362 66.0
Cpa.g.sc14.19 Carica papaya HOM05D006074 ORTHO05D008728 4.5e-128 461.8 407 60.9
ECA232G4667 Erigeron canadensis HOM05D006074 ORTHO05D008728 7.8e-128 461.1 355 69.3
BcaC06g30896 Brassica carinata HOM05D006074 ORTHO05D008728 1.7e-127 459.9 362 64.6
Sed0009974 Sechium edule HOM05D006074 ORTHO05D008728 1.7e-127 459.9 349 66.5
AT3G28760 Arabidopsis thaliana HOM05D006074 ORTHO05D008728 2.9e-127 459.1 362 64.9
TWI34G1337 Tripterygium wilfordii HOM05D006074 ORTHO05D008728 3.8e-127 458.8 361 65.9
EL10Ac2g02949 Beta vulgaris HOM05D006074 ORTHO05D008728 6.6e-127 458.0 361 64.8
C07p37700 Brassica napus HOM05D006074 ORTHO05D008728 1.9e-126 456.4 362 64.1
Aa31LG2G4460 Aethionema arabicum HOM05D006074 ORTHO05D008728 2.5e-126 456.1 361 63.2
BolC7t44287H Brassica oleracea HOM05D006074 ORTHO05D008728 2.5e-126 456.1 362 63.8
Sp2g17410 Schrenkiella parvula HOM05D006074 ORTHO05D008728 2.5e-126 456.1 362 64.6
Atru.BG.207.p Acer truncatum HOM05D006074 ORTHO05D008728 4.3e-126 455.3 359 67.1
AUR62038861 Chenopodium quinoa HOM05D006074 ORTHO05D008728 5.6e-126 454.9 361 66.2
A06p40350 Brassica napus HOM05D006074 ORTHO05D008728 2.1e-125 453.0 362 63.3
BraA06t26953Z Brassica rapa HOM05D006074 ORTHO05D008728 2.1e-125 453.0 362 63.3
Carub.0005s0731 Capsella rubella HOM05D006074 ORTHO05D008728 8.0e-125 451.1 363 64.2
AL5G18490 Arabidopsis lyrata HOM05D006074 ORTHO05D008728 1.4e-124 450.3 366 63.7
BcaC06g33639 Brassica carinata HOM05D006074 ORTHO05D008728 1.4e-124 450.3 362 63.5
AUR62031615 Chenopodium quinoa HOM05D006074 ORTHO05D008728 3.0e-124 449.1 361 65.4
Nn4g23084 Nelumbo nucifera HOM05D006074 ORTHO05D008728 5.8e-123 444.9 315 71.7
Glyma.19G020800 Glycine max HOM05D006074 ORTHO05D008728 1.3e-122 443.7 361 64.5
Os03g0170300 Oryza sativa ssp. japonica HOM05D006074 ORTHO05D008728 1.7e-122 443.4 363 64.2
Nitab4.5_0003081g0050 Nicotiana tabacum HOM05D006074 ORTHO05D008728 4.9e-122 441.8 316 71.2
Hund15626 Selenicereus undatus HOM05D006074 ORTHO05D008728 4.9e-122 441.8 366 65.3
Nitab4.5_0000002g0350 Nicotiana tabacum HOM05D006074 ORTHO05D008728 1.2e-120 437.2 316 70.3
TPR.G10370 Trifolium pratense HOM05D006074 ORTHO05D008728 1.3e-119 433.7 322 70.5
Zm00001eb402270 Zea mays HOM05D006074 ORTHO05D008728 2.5e-118 429.5 362 63.0
Peaxi162Scf00451g00822 Petunia axillaris HOM05D006074 ORTHO05D008728 2.8e-117 426.0 362 64.1
Ca_04272_v3 Cicer arietinum L. HOM05D006074 ORTHO05D008728 1.5e-115 420.2 330 68.5
SGA_v2.0_scaffold59G20672 Striga asiatica HOM05D006074 ORTHO05D008728 3.4e-115 419.1 325 66.5
Manes.15G177000 Manihot esculenta HOM05D006074 ORTHO05D008728 2.1e-109 399.8 280 71.8
Thhalv10004593m.g Eutrema salsugineum HOM05D006074 ORTHO05D008728 4.6e-104 382.1 334 60.2
AagrBONN_evm.TU.Sc2ySwM_228.462 Anthoceros agrestis HOM05D006074 ORTHO05D008728 3.6e-101 372.5 369 53.7
Pp3c9_19570 Physcomitrium patens HOM05D006074 ORTHO05D008728 2.0e-99 366.7 361 52.6
Pp3c10_1080 Physcomitrium patens HOM05D006074 ORTHO05D008728 9.9e-99 364.4 361 52.1
Mapoly0005s0075 Marchantia polymorpha HOM05D006074 ORTHO05D008728 2.2e-90 336.7 356 50.8
unitig_21.g20922 Utricularia gibba HOM05D006074 ORTHO05D008728 1.3e-85 320.9 257 61.1
FAN14G0759 Fragaria x ananassa HOM05D006074 ORTHO05D008728 2.1e-80 303.5 388 49.7
CDE02G2631 Ceratophyllum demersum HOM05D006074 ORTHO05D008728 2.7e-80 303.1 258 60.5
Glyma.13G064100 Glycine max HOM05D006074 ORTHO05D008728 7.6e-75 285.0 258 62.4
Pp3c15_19890 Physcomitrium patens HOM05D006074 ORTHO05D008728 1.2e-72 277.7 348 45.4
Ciclev10012867m.g Citrus clementina HOM05D006074 ORTHO05D008728 4.0e-68 262.7 186 74.2
Pp3c1_20750 Physcomitrium patens HOM05D006074 ORTHO05D020966 6.3e-61 238.8 420 36.4
Pp3c1_20753 Physcomitrium patens HOM05D006074 ORTHO05D020966 6.3e-61 238.8 420 36.4
Lsat_1_v5_gn_4_177220 Lactuca sativa HOM05D006074 ORTHO05D008728 1.8e-60 237.3 179 70.4
MCO08G127 Micromonas commoda HOM05D006074 ORTHO05D008728 2.4e-60 236.9 371 40.2
Pp3c2_18540 Physcomitrium patens HOM05D006074 ORTHO05D020966 2.6e-59 233.4 420 35.0
SEGI_14685 Sequoiadendron giganteum HOM05D006074 ORTHO05D008728 1.3e-58 231.1 183 61.7
CARHR151760 Cardamine hirsuta HOM05D006074 ORTHO05D008728 3.9e-55 219.5 216 52.8
Pp3c10_2120 Physcomitrium patens HOM05D006074 ORTHO05D020966 5.1e-47 192.6 526 27.9
Cre05.g248250 Chlamydomonas reinhardtii HOM05D006074 ORTHO05D008728 3.3e-46 189.9 337 40.1
Haze_18216 Corylus avellana HOM05D000132 ORTHO05D000058 2.5e-41 173.7 160 59.4
PRCOL_00003957 Prasinoderma coloniale HOM05D006074 ORTHO05D008728 2.6e-38 163.7 370 35.4
Lsat_1_v5_gn_0_26800 Lactuca sativa HOM05D006074 ORTHO05D008728 3.3e-38 163.3 137 60.6
Lsat_1_v5_gn_3_53141 Lactuca sativa HOM05D006074 ORTHO05D008728 1.6e-32 144.4 124 59.7
Actinidia17537 Actinidia chinensis HOM05D006074 ORTHO05D026256 3.4e-22 110.2 68 80.9
Sabra17G0081400 Salix brachista HOM05D006074 ORTHO05D008728 1.1e-20 105.1 71 76.1
Atru.chr3.96 Acer truncatum HOM05D006074 ORTHO05D026256 3.5e-19 100.1 70 74.3
PGSC0003DMG400013970 Solanum tuberosum HOM05D006074 ORTHO05D008728 9.5e-17 92.0 61 65.6
CDE02G1972 Ceratophyllum demersum HOM05D006074 ORTHO05D026256 4.0e-15 86.7 66 68.2
HanXRQChr09g0253281 Helianthus annuus HOM05D006074 ORTHO05D008728 2.7e-11 73.9 53 73.6
Pp3c20_4730 Physcomitrium patens HOM05D006074 ORTHO05D026055 4.5e-11 73.2 173 34.1
Pp3c20_10280 Physcomitrium patens HOM05D006074 ORTHO05D026055 1.3e-10 71.6 172 30.8
Pp3c8_20190 Physcomitrium patens HOM05D006074 ORTHO05D026055 1.7e-10 71.2 178 30.9
Pp3c23_20410 Physcomitrium patens HOM05D006074 ORTHO05D026055 2.3e-10 70.9 174 31.0


User provided reference genes

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