Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0026373 Camellia sinensis var. sinensis HOM05D006256 ORTHO05D007833 3.2e-48 194.9 107 100.0
CSS0035436 Camellia sinensis var. sinensis HOM05D006256 ORTHO05D007833 3.8e-41 171.4 106 88.7
Dinv42817 Davidia involucrata HOM05D006256 ORTHO05D007833 2.3e-22 109.0 108 61.1
Dinv43283 Davidia involucrata HOM05D006256 ORTHO05D007833 2.3e-22 109.0 108 61.1
Actinidia38660 Actinidia chinensis HOM05D006256 ORTHO05D007833 3.3e-21 105.1 109 61.5
vmacro06052 Vaccinium macrocarpon HOM05D006256 ORTHO05D007833 9.6e-21 103.6 108 56.5
Hma1.2p1_1084F.1_g255300 Hydrangea macrophylla HOM05D006256 ORTHO05D007833 1.8e-19 99.4 108 57.4
HanXRQChr10g0307761 Helianthus annuus HOM05D006256 ORTHO05D007833 4.5e-18 94.7 108 56.5
Lsat_1_v5_gn_5_88481 Lactuca sativa HOM05D006256 ORTHO05D007833 4.5e-18 94.7 105 58.1
Actinidia33300 Actinidia chinensis HOM05D006256 ORTHO05D007833 2.9e-17 92.0 113 54.0
Sed0025015 Sechium edule HOM05D006256 ORTHO05D007833 6.4e-17 90.9 112 55.4
CANSAT11G0095 Cannabis sativa HOM05D006256 ORTHO05D007833 1.9e-16 89.4 108 51.9
QL02p094215 Quercus lobata HOM05D006256 ORTHO05D007833 1.9e-16 89.4 111 52.3
HanXRQChr12g0357751 Helianthus annuus HOM05D006256 ORTHO05D007833 9.3e-16 87.0 107 51.4
CiPaw.15G164300 Carya illinoinensis HOM05D006256 ORTHO05D007833 3.5e-15 85.1 115 50.4
Nitab4.5_0006744g0050 Nicotiana tabacum HOM05D006256 ORTHO05D007833 4.6e-15 84.7 113 54.9
MELO3C010199.2 Cucumis melo HOM05D006256 ORTHO05D007833 6.0e-15 84.3 110 54.5
TAR626G0939 Trochodendron aralioides HOM05D006256 ORTHO05D007833 6.0e-15 84.3 82 58.5
MSTRG.10713 Avicennia marina HOM05D006256 ORTHO05D007833 1.0e-14 83.6 109 51.4
Cc06_g14490 Coffea canephora HOM05D006256 ORTHO05D007833 1.3e-14 83.2 110 51.8
Nn2g12458 Nelumbo nucifera HOM05D006256 ORTHO05D007833 1.3e-14 83.2 111 52.3
Nitab4.5_0001036g0150 Nicotiana tabacum HOM05D006256 ORTHO05D007833 1.3e-14 83.2 113 53.1
Aqoxy7G03320 Aquilegia oxysepala HOM05D006256 ORTHO05D007833 1.8e-14 82.8 87 57.5
MBI15_g35737_MAGBIO Magnolia biondii HOM05D006256 ORTHO05D007833 1.8e-14 82.8 78 61.5
Cfa020783 Carpinus fangiana HOM05D006256 ORTHO05D007833 3.0e-14 82.0 111 50.5
ECA234G3762 Erigeron canadensis HOM05D006256 ORTHO05D007833 3.0e-14 82.0 109 51.4
CsaV3_1G029200 Cucumis sativus L. HOM05D006256 ORTHO05D007833 3.9e-14 81.6 110 53.6
RcHm_v2.0_Chr4g0405501 Rosa chinensis HOM05D006256 ORTHO05D007833 6.7e-14 80.9 108 50.9
Prupe.1G102100 Prunus persica HOM05D006256 ORTHO05D007833 8.7e-14 80.5 109 47.7
Oeu010284.1 Olea europaea HOM05D006256 ORTHO05D007833 1.1e-13 80.1 110 45.5
ClCG06G012650 Citrullus lanatus HOM05D006256 ORTHO05D007833 1.5e-13 79.7 110 50.0
Haze_19139 Corylus avellana HOM05D006256 ORTHO05D007833 2.5e-13 79.0 111 49.5
FvH4_4g09690 Fragaria vesca HOM05D006256 ORTHO05D007833 2.5e-13 79.0 109 48.6
FAN07G0991 Fragaria x ananassa HOM05D006256 ORTHO05D007833 3.3e-13 78.6 108 50.0
Peaxi162Scf00563g00414 Petunia axillaris HOM05D006256 ORTHO05D007833 3.3e-13 78.6 110 47.3
Atru.chr7.353 Acer truncatum HOM05D006256 ORTHO05D007833 4.3e-13 78.2 109 54.1
MBI15_g42789_MAGBIO Magnolia biondii HOM05D006256 ORTHO05D007833 4.3e-13 78.2 73 61.6
CiPaw.16G106600 Carya illinoinensis HOM05D006256 ORTHO05D007833 5.6e-13 77.8 110 49.1
Migut.K00301 Erythranthe guttata HOM05D006256 ORTHO05D007833 5.6e-13 77.8 110 50.0
FAN17G2907 Fragaria x ananassa HOM05D006256 ORTHO05D007833 1.3e-12 76.6 109 48.6
FAN17G2911 Fragaria x ananassa HOM05D006256 ORTHO05D007833 1.3e-12 76.6 109 48.6
VMungo1215G1943 Vigna mungo HOM05D006256 ORTHO05D007833 1.3e-12 76.6 97 54.6
TAR383G0166 Trochodendron aralioides HOM05D006256 ORTHO05D007833 1.6e-12 76.3 101 47.5
MD04G1052200 Malus domestica HOM05D006256 ORTHO05D007833 2.1e-12 75.9 81 56.8
Manes.14G113600 Manihot esculenta HOM05D006256 ORTHO05D007833 2.1e-12 75.9 112 52.7
SalBow1G2070 Salvia bowleyana HOM05D006256 ORTHO05D007833 2.1e-12 75.9 104 48.1
PGR102G0560 Punica granatum HOM05D006256 ORTHO05D007833 2.8e-12 75.5 115 49.6
arahy.Tifrunner.gnm1.ann1.6DRS7R Arachis hypogaea HOM05D006256 ORTHO05D007833 3.7e-12 75.1 108 53.7
arahy.Tifrunner.gnm1.ann1.RJ4A7B Arachis hypogaea HOM05D006256 ORTHO05D007833 3.7e-12 75.1 108 53.7
Migut.J01392 Erythranthe guttata HOM05D006256 ORTHO05D007833 3.7e-12 75.1 111 50.5
ATR0580G126 Amborella trichopoda HOM05D006256 ORTHO05D007833 4.8e-12 74.7 97 56.7
Lj4g0007171 Lotus japonicus HOM05D006256 ORTHO05D007833 6.2e-12 74.3 108 51.9
AUR62028378 Chenopodium quinoa HOM05D006256 ORTHO05D007833 1.1e-11 73.6 120 47.5
C04p53670 Brassica napus HOM05D006256 ORTHO05D007833 2.4e-11 72.4 111 50.5
CDE02G1547 Ceratophyllum demersum HOM05D006256 ORTHO05D007833 2.4e-11 72.4 78 56.4
FAN22G0392 Fragaria x ananassa HOM05D006256 ORTHO05D007833 2.4e-11 72.4 109 47.7
PSO170G3639 Papaver somniferum HOM05D006256 ORTHO05D007833 3.1e-11 72.0 107 48.6
Sp4g02990 Schrenkiella parvula HOM05D006256 ORTHO05D007833 3.1e-11 72.0 88 51.1
Gohir.D08G098900 Gossypium hirsutum HOM05D006256 ORTHO05D007833 4.0e-11 71.6 89 53.9
AUR62025373 Chenopodium quinoa HOM05D006256 ORTHO05D007833 6.9e-11 70.9 114 46.5
Solyc07g006000.3 Solanum lycopersicum HOM05D006256 ORTHO05D007833 6.9e-11 70.9 111 46.8
PGSC0003DMG400011211 Solanum tuberosum HOM05D006256 ORTHO05D007833 6.9e-11 70.9 111 46.8
A04p18400 Brassica napus HOM05D006256 ORTHO05D007833 9.0e-11 70.5 111 49.5
C08p39560 Brassica napus HOM05D006256 ORTHO05D007833 9.0e-11 70.5 108 46.3
BolC8t51529H Brassica oleracea HOM05D006256 ORTHO05D007833 9.0e-11 70.5 108 46.3
BraA04t17452Z Brassica rapa HOM05D006256 ORTHO05D007833 9.0e-11 70.5 111 49.5
Cpa.g.sc199.16 Carica papaya HOM05D006256 ORTHO05D007833 9.0e-11 70.5 106 50.0
COL.COLO4_05401 Corchorus olitorius HOM05D006256 ORTHO05D007833 9.0e-11 70.5 111 49.5
Sopen07g002140 Solanum pennellii HOM05D006256 ORTHO05D007833 9.0e-11 70.5 111 46.8
A09p56610 Brassica napus HOM05D006256 ORTHO05D007833 1.2e-10 70.1 92 48.9
BraA09t41052Z Brassica rapa HOM05D006256 ORTHO05D007833 1.2e-10 70.1 92 48.9
Gorai.004G106500 Gossypium raimondii HOM05D006256 ORTHO05D007833 1.2e-10 70.1 89 52.8
Glyma.02G206700 Glycine max HOM05D006256 ORTHO05D007833 1.5e-10 69.7 103 50.5
Potri.018G102700 Populus trichocarpa HOM05D006256 ORTHO05D007833 1.5e-10 69.7 109 51.4
Aa31LG7G12680 Aethionema arabicum HOM05D006256 ORTHO05D007833 2.0e-10 69.3 111 45.9
BolC4t26923H Brassica oleracea HOM05D006256 ORTHO05D007833 2.0e-10 69.3 111 49.5
Gohir.A08G087800 Gossypium hirsutum HOM05D006256 ORTHO05D007833 2.0e-10 69.3 88 54.5
Medtr4g130300 Medicago truncatula HOM05D006256 ORTHO05D007833 2.0e-10 69.3 109 48.6
Sabra18G0088200 Salix brachista HOM05D006256 ORTHO05D007833 2.0e-10 69.3 84 53.6
SGA_v2.0_scaffold12G06024 Striga asiatica HOM05D006256 ORTHO05D007833 2.0e-10 69.3 111 45.9
Thecc.09G154100 Theobroma cacao HOM05D006256 ORTHO05D007833 2.0e-10 69.3 112 50.0
BcaC07g40961 Brassica carinata HOM05D006256 ORTHO05D007833 3.4e-10 68.6 92 48.9
Ciclev10009792m.g Citrus clementina HOM05D006256 ORTHO05D007833 3.4e-10 68.6 95 46.3
Eucgr.C02515 Eucalyptus grandis HOM05D006256 ORTHO05D007833 5.8e-10 67.8 108 47.2
CDE05G2121 Ceratophyllum demersum HOM05D006256 ORTHO05D007833 7.6e-10 67.4 78 52.6
Glyma.17G071200 Glycine max HOM05D006256 ORTHO05D007833 7.6e-10 67.4 81 54.3
Duzib187G1001 Durio zibethinus HOM05D006256 ORTHO05D007833 1.0e-09 67.0 112 48.2
Phvul.003G153700 Phaseolus vulgaris HOM05D006256 ORTHO05D007833 1.0e-09 67.0 100 50.0
TWI32G1056 Tripterygium wilfordii HOM05D006256 ORTHO05D007833 1.0e-09 67.0 97 50.5
Eucgr.L01548 Eucalyptus grandis HOM05D006256 ORTHO05D007833 1.3e-09 66.6 108 45.4
PSO063G2398 Papaver somniferum HOM05D006256 ORTHO05D007833 1.3e-09 66.6 108 48.1
HPP92_010352 Vanilla planifolia HOM05D006256 ORTHO05D007833 1.3e-09 66.6 109 47.7
CARHR118260 Cardamine hirsuta HOM05D006256 ORTHO05D007833 1.7e-09 66.2 71 52.1
Thhalv10000362m.g Eutrema salsugineum HOM05D006256 ORTHO05D007833 2.2e-09 65.9 111 45.0
Carub.0004s0326 Capsella rubella HOM05D006256 ORTHO05D007833 3.8e-09 65.1 111 45.0
CAN.G1190.22 Capsicum annuum HOM05D006256 ORTHO05D007833 3.8e-09 65.1 105 43.8
SGA_v2.0_scaffold222G42778 Striga asiatica HOM05D006256 ORTHO05D007833 3.8e-09 65.1 109 44.0
Ah.09g228670 Amaranthus hybridus HOM05D006256 ORTHO05D007833 4.9e-09 64.7 117 45.3
EL10Ac8g18906 Beta vulgaris HOM05D006256 ORTHO05D007833 4.9e-09 64.7 125 43.2
Gohir.A04G058552 Gossypium hirsutum HOM05D006256 ORTHO05D007833 6.5e-09 64.3 87 50.6
Psat7g006560 Pisum sativum HOM05D006256 ORTHO05D007833 8.4e-09 63.9 106 46.2
Lalb_Chr13g0300681 Lupinus albus HOM05D006256 ORTHO05D007833 1.4e-08 63.2 107 43.9
Hund08959 Selenicereus undatus HOM05D006256 ORTHO05D007833 3.2e-08 62.0 114 42.1
SEGI_40166 Sequoiadendron giganteum HOM05D006256 ORTHO05D007833 3.2e-08 62.0 37 81.1
AT2G24090 Arabidopsis thaliana HOM05D006256 ORTHO05D007833 4.2e-08 61.6 111 43.2
AL4G14180 Arabidopsis lyrata HOM05D006256 ORTHO05D007833 5.5e-08 61.2 111 43.2
CSS0023303 Camellia sinensis var. sinensis HOM05D006256 ORTHO05D007833 5.5e-08 61.2 107 43.9
TPR.G24835 Trifolium pratense HOM05D006256 ORTHO05D007833 2.7e-07 58.9 110 41.8
Os06g0647100 Oryza sativa ssp. japonica HOM05D006256 ORTHO05D007833 1.8e-06 56.2 36 77.8
vmacro10856 Vaccinium macrocarpon HOM05D001438 ORTHO05D001336 2.3e-06 55.8 85 44.7
THA.LOC104803911 Tarenaya hassleriana HOM05D006256 ORTHO05D007833 3.0e-06 55.5 120 40.0
unitig_748.g7194 Utricularia gibba HOM05D006256 ORTHO05D007833 3.0e-06 55.5 38 73.7
CBR_g46223 Chara braunii HOM05D006256 ORTHO05D007833 5.1e-06 54.7 34 79.4


User provided reference genes

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