Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0026369 Camellia sinensis var. sinensis HOM05D007227 ORTHO05D002252 1.5e-68 262.7 128 100.0
CSS0038929 Camellia sinensis var. sinensis HOM05D007227 ORTHO05D002252 4.1e-42 174.9 88 93.2
CSS0037950 Camellia sinensis var. sinensis HOM05D007227 ORTHO05D002252 4.0e-21 105.1 121 55.4
Dinv23539 Davidia involucrata HOM05D007227 ORTHO05D002252 3.5e-17 92.0 110 47.3
Dinv42073 Davidia involucrata HOM05D007227 ORTHO05D002252 3.5e-17 92.0 129 47.3
Oeu014341.1 Olea europaea HOM05D007227 ORTHO05D002252 3.6e-14 82.0 84 48.8
Phvul.011G046400 Phaseolus vulgaris HOM05D007227 ORTHO05D002252 3.0e-13 79.0 86 47.7
GSVIVG01031940001 Vitis vinifera HOM05D007227 ORTHO05D002252 3.0e-13 79.0 78 46.2
Rhsim11G0174800 Rhododendron simsii HOM05D007227 ORTHO05D002252 5.2e-13 78.2 87 46.0
Glyma.12G044400 Glycine max HOM05D007227 ORTHO05D002252 8.8e-13 77.4 120 38.3
Glyma.11G119200 Glycine max HOM05D007227 ORTHO05D002252 4.4e-12 75.1 112 37.5
Lj3g0002713 Lotus japonicus HOM05D007227 ORTHO05D002252 5.7e-12 74.7 76 44.7
Glyma.06G013300 Glycine max HOM05D007227 ORTHO05D002252 9.8e-12 73.9 76 48.7
MSTRG.20093 Avicennia marina HOM05D007227 ORTHO05D002252 1.7e-11 73.2 90 42.2
CiPaw.05G063200 Carya illinoinensis HOM05D007227 ORTHO05D002252 2.2e-11 72.8 82 42.7
CiPaw.06G136700 Carya illinoinensis HOM05D007227 ORTHO05D002252 2.8e-11 72.4 80 47.5
Lj9C368G9 Lonicera japonica HOM05D007227 ORTHO05D002252 3.7e-11 72.0 75 45.3
Actinidia00511 Actinidia chinensis HOM05D007227 ORTHO05D002252 6.3e-11 71.2 91 48.4
QL11p043287 Quercus lobata HOM05D007227 ORTHO05D002252 1.4e-10 70.1 76 47.4
Lalb_Chr23g0265441 Lupinus albus HOM05D007227 ORTHO05D002252 1.8e-10 69.7 103 36.9
Cfa005018 Carpinus fangiana HOM05D007227 ORTHO05D002252 3.1e-10 68.9 75 44.0
Glyma.04G013400 Glycine max HOM05D007227 ORTHO05D002252 4.1e-10 68.6 79 44.3
Glyma.02G300900 Glycine max HOM05D007227 ORTHO05D002252 5.4e-10 68.2 74 43.2
Lsat_1_v5_gn_9_109540 Lactuca sativa HOM05D007227 ORTHO05D002252 7.0e-10 67.8 79 40.5
MSTRG.27703 Avicennia marina HOM05D007227 ORTHO05D002252 9.1e-10 67.4 93 43.0
LjContig00081g0025580 Lotus japonicus HOM05D007227 ORTHO05D002252 9.1e-10 67.4 96 34.4
SalBow6G0041 Salvia bowleyana HOM05D007227 ORTHO05D002252 9.1e-10 67.4 65 43.1
SalBow6G1279 Salvia bowleyana HOM05D007227 ORTHO05D002252 9.1e-10 67.4 65 43.1
VMungo1127G0518 Vigna mungo HOM05D007227 ORTHO05D002252 9.1e-10 67.4 76 44.7
Gorai.002G211000 Gossypium raimondii HOM05D007227 ORTHO05D002252 2.0e-09 66.2 103 38.8
arahy.Tifrunner.gnm1.ann1.ZTQ30L Arachis hypogaea HOM05D007227 ORTHO05D002252 2.7e-09 65.9 71 46.5
Gohir.D01G169400 Gossypium hirsutum HOM05D007227 ORTHO05D002252 2.7e-09 65.9 79 43.0
Lj1g0025376 Lotus japonicus HOM05D007227 ORTHO05D002252 3.5e-09 65.5 71 45.1
Gohir.A01G178500 Gossypium hirsutum HOM05D007227 ORTHO05D002252 4.5e-09 65.1 79 43.0
Lalb_Chr19g0138601 Lupinus albus HOM05D007227 ORTHO05D002252 4.5e-09 65.1 76 40.8
TPR.G38124 Trifolium pratense HOM05D007227 ORTHO05D002252 4.5e-09 65.1 70 44.3
Thecc.02G037700 Theobroma cacao HOM05D007227 ORTHO05D002252 5.9e-09 64.7 68 47.1
Medtr4g069770 Medicago truncatula HOM05D007227 ORTHO05D002252 1.0e-08 63.9 87 37.9
Psat7g141720 Pisum sativum HOM05D007227 ORTHO05D002252 1.0e-08 63.9 79 44.3
Sabra04G0101600 Salix brachista HOM05D007227 ORTHO05D002252 1.0e-08 63.9 77 46.8
Sed0019925 Sechium edule HOM05D007227 ORTHO05D002252 1.0e-08 63.9 73 45.2
TPR.G8589 Trifolium pratense HOM05D007227 ORTHO05D002252 1.0e-08 63.9 73 41.1
arahy.Tifrunner.gnm1.ann1.16ZZBQ Arachis hypogaea HOM05D007227 ORTHO05D002252 1.3e-08 63.5 71 45.1
Gohir.A03G212200 Gossypium hirsutum HOM05D007227 ORTHO05D002252 3.8e-08 62.0 69 42.0
Gohir.D02G233600 Gossypium hirsutum HOM05D007227 ORTHO05D002252 3.8e-08 62.0 69 42.0
Gorai.005G261600 Gossypium raimondii HOM05D007227 ORTHO05D002252 3.8e-08 62.0 69 42.0
Medtr5g095980 Medicago truncatula HOM05D007227 ORTHO05D002252 3.8e-08 62.0 73 39.7
TPR.G9008 Trifolium pratense HOM05D007227 ORTHO05D002252 6.5e-08 61.2 89 37.1
LjContig00272g0019714 Lotus japonicus HOM05D007227 ORTHO05D002252 8.5e-08 60.8 89 31.5
Cc07_g14570 Coffea canephora HOM05D007227 ORTHO05D002252 1.9e-07 59.7 115 36.5
MD10G1078100 Malus domestica HOM05D007227 ORTHO05D002252 1.9e-07 59.7 66 47.0
Potri.004G153200 Populus trichocarpa HOM05D007227 ORTHO05D002252 1.9e-07 59.7 75 41.3
Duzib132G0468 Durio zibethinus HOM05D007227 ORTHO05D002252 3.2e-07 58.9 104 35.6
Phvul.009G024600 Phaseolus vulgaris HOM05D007227 ORTHO05D002252 3.2e-07 58.9 74 40.5
SalBow3G1687 Salvia bowleyana HOM05D007227 ORTHO05D002252 4.2e-07 58.5 74 41.9
FAN15G1220 Fragaria x ananassa HOM05D007227 ORTHO05D002252 5.5e-07 58.2 71 42.3
vmacro17500 Vaccinium macrocarpon HOM05D017364 ORTHO05D002252 5.5e-07 58.2 76 44.7
EL10Ac9g21739 Beta vulgaris HOM05D007227 ORTHO05D002252 7.2e-07 57.8 83 39.8
AUR62011338 Chenopodium quinoa HOM05D007227 ORTHO05D002252 7.2e-07 57.8 70 41.4
Ciclev10029608m.g Citrus clementina HOM05D007227 ORTHO05D002252 7.2e-07 57.8 102 34.3
Manes.07G098300 Manihot esculenta HOM05D007556 ORTHO05D002252 7.2e-07 57.8 83 33.7
Peaxi162Scf00016g00938 Petunia axillaris HOM05D007227 ORTHO05D002252 7.2e-07 57.8 77 37.7
FvH4_2g08520 Fragaria vesca HOM05D007227 ORTHO05D002252 9.4e-07 57.4 71 43.7
FAN24G3084 Fragaria x ananassa HOM05D007227 ORTHO05D002252 9.4e-07 57.4 71 43.7
HanXRQChr16g0505811 Helianthus annuus HOM05D007227 ORTHO05D002252 9.4e-07 57.4 82 35.4
Medtr3g007880 Medicago truncatula HOM05D007227 ORTHO05D002252 9.4e-07 57.4 73 37.0
Nitab4.5_0001794g0120 Nicotiana tabacum HOM05D007227 ORTHO05D002252 1.2e-06 57.0 75 36.0
Dinv23538 Davidia involucrata HOM05D007556 ORTHO05D002252 1.6e-06 56.6 96 34.4
Migut.N01231 Erythranthe guttata HOM05D007227 ORTHO05D002252 1.6e-06 56.6 76 42.1
FAN27G2103 Fragaria x ananassa HOM05D007227 ORTHO05D002252 1.6e-06 56.6 71 39.4
Potri.009G114400 Populus trichocarpa HOM05D007227 ORTHO05D002252 1.6e-06 56.6 82 43.9
Eucgr.I01259 Eucalyptus grandis HOM05D007227 ORTHO05D002252 2.1e-06 56.2 84 34.5
HanXRQChr04g0127891 Helianthus annuus HOM05D007227 ORTHO05D002252 2.1e-06 56.2 70 38.6
Manes.17G100100 Manihot esculenta HOM05D007227 ORTHO05D002252 2.1e-06 56.2 80 42.5
ECA236G1258 Erigeron canadensis HOM05D007227 ORTHO05D002252 2.7e-06 55.8 81 38.3
MD00G1082000 Malus domestica HOM05D007227 ORTHO05D002252 2.7e-06 55.8 66 43.9
arahy.Tifrunner.gnm1.ann1.9WD8WJ Arachis hypogaea HOM05D007227 ORTHO05D002252 3.6e-06 55.5 84 39.3
HanXRQChr01g0007701 Helianthus annuus HOM05D017364 ORTHO05D002252 3.6e-06 55.5 77 39.0
PGR142G1531 Punica granatum HOM05D007227 ORTHO05D002252 4.7e-06 55.1 87 39.1
ClCG11G004490 Citrullus lanatus HOM05D007227 ORTHO05D002252 6.1e-06 54.7 84 35.7
Prupe.8G099800 Prunus persica HOM05D007227 ORTHO05D002252 6.1e-06 54.7 70 44.3
RcHm_v2.0_Chr6g0263881 Rosa chinensis HOM05D007227 ORTHO05D002252 6.1e-06 54.7 83 41.0
arahy.Tifrunner.gnm1.ann1.BHH580 Arachis hypogaea HOM05D007227 ORTHO05D002252 8.0e-06 54.3 73 41.1
Manes.15G164600 Manihot esculenta HOM05D007227 ORTHO05D002252 8.0e-06 54.3 112 36.6


User provided reference genes

Program Settings