Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0026358 Camellia sinensis var. sinensis HOM05D005917 ORTHO05D007517 9.5e-248 859.8 442 100.0
Rhsim06G0173900 Rhododendron simsii HOM05D005917 ORTHO05D007517 1.5e-181 639.8 508 70.3
Hma1.2p1_0405F.1_g145810 Hydrangea macrophylla HOM05D005917 ORTHO05D007517 1.2e-178 630.2 506 69.2
Dinv07857 Davidia involucrata HOM05D005917 ORTHO05D007517 3.0e-177 625.5 483 72.7
Nn1g08522 Nelumbo nucifera HOM05D005917 ORTHO05D007517 7.7e-173 610.9 511 67.9
vmacro12107 Vaccinium macrocarpon HOM05D005917 ORTHO05D007517 2.5e-171 605.9 504 68.1
TAR624G1058 Trochodendron aralioides HOM05D005917 ORTHO05D007517 2.5e-168 595.9 519 64.7
Manes.13G063400 Manihot esculenta HOM05D005917 ORTHO05D007517 4.3e-168 595.1 514 66.1
Lj1P791T65 Lonicera japonica HOM05D005917 ORTHO05D007517 1.2e-165 587.0 510 66.1
PGSC0003DMG400006133 Solanum tuberosum HOM05D005917 ORTHO05D007517 1.2e-162 577.0 514 64.8
Solyc07g047980.3 Solanum lycopersicum HOM05D005917 ORTHO05D007517 2.1e-162 576.2 515 64.9
Sopen07g024410 Solanum pennellii HOM05D005917 ORTHO05D007517 2.1e-162 576.2 515 65.2
CiPaw.04G195700 Carya illinoinensis HOM05D005917 ORTHO05D007517 1.0e-161 573.9 519 64.5
Peaxi162Scf00776g00033 Petunia axillaris HOM05D005917 ORTHO05D007517 3.0e-161 572.4 509 65.4
Thecc.01G189700 Theobroma cacao HOM05D005917 ORTHO05D007517 3.0e-161 572.4 514 63.2
Duzib133G0758 Durio zibethinus HOM05D005917 ORTHO05D007517 5.1e-161 571.6 514 63.4
PGR042G1386 Punica granatum HOM05D005917 ORTHO05D007517 2.6e-160 569.3 512 64.1
CAN.G854.3 Capsicum annuum HOM05D005917 ORTHO05D007517 3.3e-160 568.9 511 64.6
QL08p028769 Quercus lobata HOM05D005917 ORTHO05D007517 4.4e-160 568.5 513 63.5
Sabra02G0169500 Salix brachista HOM05D005917 ORTHO05D007517 4.4e-160 568.5 517 62.5
Nitab4.5_0005699g0010 Nicotiana tabacum HOM05D005917 ORTHO05D007517 5.7e-160 568.2 523 64.1
Potri.002G222100 Populus trichocarpa HOM05D005917 ORTHO05D007517 7.4e-160 567.8 518 62.7
Aqoxy1G02033 Aquilegia oxysepala HOM05D005917 ORTHO05D007517 2.2e-159 566.2 509 64.8
TWI36G1171 Tripterygium wilfordii HOM05D005917 ORTHO05D007517 3.1e-158 562.4 516 63.6
EL10Ac9g22738 Beta vulgaris HOM05D005917 ORTHO05D007517 1.5e-157 560.1 504 64.7
Lsat_1_v5_gn_7_96161 Lactuca sativa HOM05D005917 ORTHO05D007517 1.5e-157 560.1 520 62.5
Nitab4.5_0000441g0160 Nicotiana tabacum HOM05D005917 ORTHO05D007517 5.9e-157 558.1 525 63.4
DCAR_019712 Daucus carota HOM05D005917 ORTHO05D007517 7.7e-157 557.8 514 61.7
Gohir.A11G150200 Gossypium hirsutum HOM05D005917 ORTHO05D007517 1.0e-156 557.4 516 62.2
Gorai.007G167200 Gossypium raimondii HOM05D005917 ORTHO05D007517 1.0e-156 557.4 516 62.6
Gohir.D11G156700 Gossypium hirsutum HOM05D005917 ORTHO05D007517 6.5e-156 554.7 517 62.3
COL.COLO4_33026 Corchorus olitorius HOM05D005917 ORTHO05D007517 1.1e-155 553.9 514 62.3
PSO700G0235 Papaver somniferum HOM05D005917 ORTHO05D007517 1.1e-155 553.9 515 63.1
Sc21g0000840 Simmondsia chinensis HOM05D005917 ORTHO05D007517 1.1e-155 553.9 505 62.4
Cpa.g.sc136.15 Carica papaya HOM05D005917 ORTHO05D007517 1.9e-155 553.1 515 61.9
MBI16_g11554_MAGBIO Magnolia biondii HOM05D005917 ORTHO05D007517 1.2e-154 550.4 512 61.7
Cfa014247 Carpinus fangiana HOM05D005917 ORTHO05D007517 1.6e-154 550.1 516 64.0
PSO761G0708 Papaver somniferum HOM05D005917 ORTHO05D007517 2.7e-154 549.3 515 63.1
TWI18G0259 Tripterygium wilfordii HOM05D005917 ORTHO05D007517 6.1e-154 548.1 509 62.1
TAR626G1403 Trochodendron aralioides HOM05D005917 ORTHO05D007517 8.0e-154 547.7 457 65.9
ClCG02G002680 Citrullus lanatus HOM05D005917 ORTHO05D007517 2.6e-152 542.7 517 62.3
MD09G1121500 Malus domestica HOM05D005917 ORTHO05D007517 4.4e-152 542.0 510 62.0
Haze_12696 Corylus avellana HOM05D005917 ORTHO05D007517 5.7e-152 541.6 511 63.8
Cc02_g11180 Coffea canephora HOM05D005917 ORTHO05D007517 2.2e-151 539.7 537 61.6
AUR62017525 Chenopodium quinoa HOM05D005917 ORTHO05D007517 3.7e-151 538.9 510 62.0
Sed0016848 Sechium edule HOM05D005917 ORTHO05D007517 8.2e-151 537.7 519 61.1
Ca_06463_v3 Cicer arietinum L. HOM05D005917 ORTHO05D007517 1.8e-150 536.6 511 62.6
Atru.chr6.3353 Acer truncatum HOM05D005917 ORTHO05D007517 3.1e-150 535.8 514 61.9
Prupe.3G202200 Prunus persica HOM05D005917 ORTHO05D007517 5.3e-150 535.0 511 60.9
Ah.14g082780 Amaranthus hybridus HOM05D005917 ORTHO05D007517 7.0e-150 534.6 502 62.0
Glyma.02G306400 Glycine max HOM05D005917 ORTHO05D007517 7.0e-150 534.6 508 62.0
Glyma.14G006700 Glycine max HOM05D005917 ORTHO05D007517 2.6e-149 532.7 508 61.8
CsaV3_7G002690 Cucumis sativus L. HOM05D005917 ORTHO05D007517 4.5e-149 531.9 517 61.1
Ciclev10014942m.g Citrus clementina HOM05D005917 ORTHO05D007517 5.9e-149 531.6 517 60.0
TPR.G15058 Trifolium pratense HOM05D005917 ORTHO05D007517 7.7e-149 531.2 509 61.9
Eucgr.K00656 Eucalyptus grandis HOM05D005917 ORTHO05D007517 2.2e-148 529.6 511 59.5
Medtr5g097510 Medicago truncatula HOM05D005917 ORTHO05D007517 6.5e-148 528.1 516 60.9
Lalb_Chr17g0349121 Lupinus albus HOM05D005917 ORTHO05D007517 2.5e-147 526.2 518 59.7
MD17G1112500 Malus domestica HOM05D005917 ORTHO05D007517 5.5e-147 525.0 509 60.5
arahy.Tifrunner.gnm1.ann1.V8M1HU Arachis hypogaea HOM05D005917 ORTHO05D007517 7.2e-147 524.6 520 61.0
Potri.014G164200 Populus trichocarpa HOM05D005917 ORTHO05D007517 1.2e-146 523.9 525 58.9
Manes.12G062101 Manihot esculenta HOM05D005917 ORTHO05D007517 1.6e-146 523.5 506 60.5
THA.LOC104802624 Tarenaya hassleriana HOM05D005917 ORTHO05D007517 1.6e-146 523.5 514 58.9
VMungo0647G1382 Vigna mungo HOM05D005917 ORTHO05D007517 4.7e-146 521.9 508 60.6
ECA236G4414 Erigeron canadensis HOM05D005917 ORTHO05D007517 1.0e-145 520.8 526 58.6
AUR62015069 Chenopodium quinoa HOM05D005917 ORTHO05D007517 1.8e-145 520.0 466 63.5
Psat0s736g0080 Pisum sativum HOM05D005917 ORTHO05D007517 2.3e-145 519.6 509 60.5
AL3G19160 Arabidopsis lyrata HOM05D005917 ORTHO05D007517 4.4e-144 515.4 504 58.1
Thhalv10022183m.g Eutrema salsugineum HOM05D005917 ORTHO05D007517 4.8e-143 511.9 502 58.0
CARHR082500 Cardamine hirsuta HOM05D005917 ORTHO05D007517 6.3e-143 511.5 505 58.6
LjContig00081g0012334 Lotus japonicus HOM05D005917 ORTHO05D007517 8.3e-143 511.1 520 58.5
Aa31LG5G18370 Aethionema arabicum HOM05D005917 ORTHO05D007517 2.4e-142 509.6 515 57.3
arahy.Tifrunner.gnm1.ann1.410RPC Arachis hypogaea HOM05D005917 ORTHO05D007517 2.4e-142 509.6 511 59.7
Phvul.008G286200 Phaseolus vulgaris HOM05D005917 ORTHO05D007517 2.0e-141 506.5 509 58.7
MSTRG.14928 Avicennia marina HOM05D005917 ORTHO05D007517 2.7e-141 506.1 524 58.4
HanXRQChr04g0126661 Helianthus annuus HOM05D005917 ORTHO05D007517 1.7e-140 503.4 514 57.8
AT3G07790 Arabidopsis thaliana HOM05D005917 ORTHO05D007517 2.9e-140 502.7 509 57.2
Actinidia09775 Actinidia chinensis HOM05D005917 ORTHO05D007517 6.5e-140 501.5 455 63.5
Carub.0003s0737 Capsella rubella HOM05D005917 ORTHO05D007517 2.5e-139 499.6 516 57.0
Sp3g06720 Schrenkiella parvula HOM05D005917 ORTHO05D007517 2.5e-139 499.6 503 56.7
SalBow2G0814 Salvia bowleyana HOM05D005917 ORTHO05D007517 9.4e-139 497.7 521 57.4
SHI10119 Sapria himalayana HOM05D005917 ORTHO05D007517 1.2e-138 497.3 509 57.0
SalBow2G2149 Salvia bowleyana HOM05D005917 ORTHO05D007517 8.0e-138 494.6 516 57.2
FAN05G4769 Fragaria x ananassa HOM05D005917 ORTHO05D007517 2.6e-136 489.6 513 58.5
SGA_v2.0_scaffold302G47853 Striga asiatica HOM05D005917 ORTHO05D000086 2.6e-136 489.6 518 57.1
Oeu012341.1 Olea europaea HOM05D005917 ORTHO05D007517 4.4e-136 488.8 520 56.9
FAN09G3123 Fragaria x ananassa HOM05D005917 ORTHO05D007517 1.7e-135 486.9 510 58.0
FvH4_6g41230 Fragaria vesca HOM05D005917 ORTHO05D007517 4.8e-135 485.3 510 57.8
FAN14G0404 Fragaria x ananassa HOM05D005917 ORTHO05D007517 1.8e-134 483.4 510 57.8
CDE02G0007 Ceratophyllum demersum HOM05D005917 ORTHO05D007517 4.1e-134 482.3 482 57.5
RcHm_v2.0_Chr2g0156781 Rosa chinensis HOM05D005917 ORTHO05D007517 2.0e-133 479.9 510 57.1
Migut.M00025 Erythranthe guttata HOM05D005917 ORTHO05D007517 1.7e-132 476.9 516 56.6
C05p59510 Brassica napus HOM05D005917 ORTHO05D007517 8.0e-130 468.0 493 55.8
HPP92_002896 Vanilla planifolia HOM05D005917 ORTHO05D007517 2.3e-129 466.5 532 54.9
BcaC09g47947 Brassica carinata HOM05D005917 ORTHO05D007517 4.4e-128 462.2 498 56.0
BolC5t34607H Brassica oleracea HOM05D005917 ORTHO05D007517 5.7e-128 461.8 493 55.6
BolC1t05532H Brassica oleracea HOM05D005917 ORTHO05D007517 1.3e-127 460.7 500 55.4
A05p40430 Brassica napus HOM05D005917 ORTHO05D007517 1.7e-127 460.3 493 56.0
BraA05t22776Z Brassica rapa HOM05D005917 ORTHO05D007517 1.7e-127 460.3 493 56.0
unitig_747.g21169 Utricularia gibba HOM05D005917 ORTHO05D007517 2.2e-127 459.9 521 53.2
BcaC05g29571 Brassica carinata HOM05D005917 ORTHO05D007517 2.8e-127 459.5 495 54.5
HPP92_002885 Vanilla planifolia HOM05D005917 ORTHO05D007517 2.8e-127 459.5 532 54.5
BraA01t04362Z Brassica rapa HOM05D005917 ORTHO05D007517 1.1e-126 457.6 499 55.3
FAN02G4512 Fragaria x ananassa HOM05D005917 ORTHO05D007517 4.5e-125 452.2 503 55.3
Os06g0502900 Oryza sativa ssp. japonica HOM05D005917 ORTHO05D007517 1.2e-117 427.6 512 52.5
SEGI_07273 Sequoiadendron giganteum HOM05D005917 ORTHO05D007517 1.5e-112 410.6 528 48.5
Zm00001eb209420 Zea mays HOM05D005917 ORTHO05D007517 1.5e-112 410.6 502 52.2
Zm00001eb209430 Zea mays HOM05D005917 ORTHO05D007517 1.3e-111 407.5 502 52.0
Manes.12G052600 Manihot esculenta HOM05D005917 ORTHO05D007517 4.9e-111 405.6 469 53.7
Zm00001eb403830 Zea mays HOM05D005917 ORTHO05D007517 5.4e-110 402.1 501 51.3
ATR0665G318 Amborella trichopoda HOM05D005917 ORTHO05D007517 1.0e-108 397.9 488 51.8
GSVIVG01030044001 Vitis vinifera HOM05D005917 ORTHO05D000188 6.8e-105 385.2 441 54.9
Mapoly0016s0028 Marchantia polymorpha HOM05D005917 ORTHO05D007517 3.5e-101 372.9 543 44.6
Pp3c5_28640 Physcomitrium patens HOM05D005917 ORTHO05D007517 1.3e-100 370.9 527 45.9
MELO3C024210.2 Cucumis melo HOM05D005917 ORTHO05D007517 4.6e-93 345.9 292 66.8
SMO347G0414 Selaginella moellendorffii HOM05D005917 ORTHO05D007517 5.8e-88 328.9 503 42.7
CDE09G1298 Ceratophyllum demersum HOM05D005917 ORTHO05D007517 3.9e-84 316.2 305 58.7
Migut.L01336 Erythranthe guttata HOM05D005917 ORTHO05D007517 3.6e-82 309.7 470 47.0
CBR_g39617 Chara braunii HOM05D005917 ORTHO05D007517 2.6e-72 276.9 569 37.3
AagrBONN_evm.TU.Sc2ySwM_344.1277 Anthoceros agrestis HOM05D005917 ORTHO05D007517 2.4e-57 227.3 334 44.0
HanXRQChr11g0328131 Helianthus annuus HOM05D005917 ORTHO05D007517 5.3e-49 199.5 260 47.7
TPR.G18819 Trifolium pratense HOM05D005917 ORTHO05D007517 6.3e-42 176.0 271 41.3
Sed0013022 Sechium edule HOM05D005917 ORTHO05D007517 2.8e-26 124.0 199 46.2
Prupe.3G225800 Prunus persica HOM05D005917 ORTHO05D007517 1.5e-22 111.7 97 60.8
MCO15G396 Micromonas commoda HOM05D005917 ORTHO05D007517 4.2e-22 110.2 320 29.7
FAN14G5926 Fragaria x ananassa HOM05D005917 ORTHO05D007517 9.4e-22 109.0 105 59.0
Cre11.g482050 Chlamydomonas reinhardtii HOM05D005917 ORTHO05D007517 1.0e-20 105.5 283 29.0
Manes.16G064350 Manihot esculenta HOM05D005917 ORTHO05D007517 1.3e-18 98.6 80 62.5
CAN.G244.10 Capsicum annuum HOM05D000180 ORTHO05D000099 1.5e-14 85.1 55 69.1
Nn6g32049 Nelumbo nucifera HOM05D005917 ORTHO05D007517 3.3e-14 84.0 66 65.2
Cfa024500 Carpinus fangiana HOM05D005917 ORTHO05D007517 6.1e-13 79.7 166 31.3
FAN02G4549 Fragaria x ananassa HOM05D005917 ORTHO05D007517 8.0e-13 79.3 54 66.7
Nn6g32048 Nelumbo nucifera HOM05D005917 ORTHO05D007517 4.9e-10 70.1 45 84.4


User provided reference genes

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