Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0026316 Camellia sinensis var. sinensis HOM05D012713 ORTHO05D011057 2.9e-268 927.9 455 100.0
CSS0020841 Camellia sinensis var. sinensis HOM05D012713 ORTHO05D011057 9.1e-145 517.7 427 66.3
CSS0021702 Camellia sinensis var. sinensis HOM05D012713 ORTHO05D011057 1.2e-136 490.7 434 63.1
CSS0047841 Camellia sinensis var. sinensis HOM05D012713 ORTHO05D011057 9.5e-118 427.9 436 55.7
CSS0001491 Camellia sinensis var. sinensis HOM05D012713 ORTHO05D011057 6.6e-103 378.6 396 53.3
CSS0023562 Camellia sinensis var. sinensis HOM05D000557 ORTHO05D011057 4.1e-28 130.2 159 46.5
CSS0012554 Camellia sinensis var. sinensis HOM05D012713 ORTHO05D011057 2.7e-16 90.9 161 31.7
CSS0043342 Camellia sinensis var. sinensis HOM05D012713 ORTHO05D011057 3.6e-16 90.5 227 27.8
CSS0010468 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D011057 4.4e-14 83.6 218 27.5
Rhsim05G0024200 Rhododendron simsii HOM05D008219 ORTHO05D009356 1.7e-13 81.6 229 26.2
CSS0006937 Camellia sinensis var. sinensis HOM05D012713 ORTHO05D011057 4.8e-13 80.1 84 39.3
CSS0024781 Camellia sinensis var. sinensis HOM05D011882 ORTHO05D011057 8.3e-13 79.3 202 27.7
CSS0021891 Camellia sinensis var. sinensis HOM05D012713 ORTHO05D011057 2.9e-10 70.9 84 35.7
CSS0049061 Camellia sinensis var. sinensis HOM05D012713 ORTHO05D011057 3.8e-10 70.5 84 35.7
vmacro22723 Vaccinium macrocarpon HOM05D005228 ORTHO05D006208 1.1e-09 68.9 242 25.2
RhsimUnG0200600 Rhododendron simsii HOM05D008219 ORTHO05D009356 4.7e-08 63.5 174 24.1
CSS0020104 Camellia sinensis var. sinensis HOM05D012713 ORTHO05D011057 1.8e-07 61.6 129 26.4
CSS0044383 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000006 2.3e-07 61.2 159 27.7
Actinidia36659 Actinidia chinensis HOM05D012898 ORTHO05D009356 5.2e-07 60.1 174 28.7
Rhsim01G0047800 Rhododendron simsii HOM05D008219 ORTHO05D009356 2.0e-06 58.2 203 26.1
vmacro21269 Vaccinium macrocarpon HOM05D005003 ORTHO05D006220 2.0e-06 58.2 172 25.6
vmacro00634 Vaccinium macrocarpon HOM05D000516 ORTHO05D000409 2.6e-06 57.8 141 24.8
Actinidia12328 Actinidia chinensis HOM05D008219 ORTHO05D009356 3.4e-06 57.4 142 28.9
vmacro10949 Vaccinium macrocarpon HOM05D008219 ORTHO05D009356 3.4e-06 57.4 198 23.7


User provided reference genes

Program Settings