Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0026295 Camellia sinensis var. sinensis HOM05D006585 ORTHO05D007798 3.6e-70 268.1 132 100.0
Dinv24805 Davidia involucrata HOM05D006585 ORTHO05D007798 3.9e-40 168.3 122 71.3
Actinidia27800 Actinidia chinensis HOM05D006585 ORTHO05D007798 4.8e-38 161.4 123 69.1
CiPaw.05G183700 Carya illinoinensis HOM05D006585 ORTHO05D007798 6.5e-35 151.0 121 60.3
TAR371G0523 Trochodendron aralioides HOM05D006585 ORTHO05D007798 6.5e-35 151.0 121 62.8
Cfa009198 Carpinus fangiana HOM05D006585 ORTHO05D007798 6.7e-32 141.0 121 54.5
FAN12G1097 Fragaria x ananassa HOM05D006585 ORTHO05D007798 1.7e-30 136.3 124 54.8
FAN12G1379 Fragaria x ananassa HOM05D006585 ORTHO05D007798 1.7e-30 136.3 124 54.8
FvH4_4g25900 Fragaria vesca HOM05D006585 ORTHO05D007798 2.2e-30 136.0 124 54.0
QL03p058556 Quercus lobata HOM05D006585 ORTHO05D007798 2.8e-30 135.6 145 50.3
FAN07G1571 Fragaria x ananassa HOM05D006585 ORTHO05D007798 3.7e-30 135.2 124 54.8
Manes.13G025900 Manihot esculenta HOM05D006585 ORTHO05D007798 6.3e-30 134.4 122 57.4
RcHm_v2.0_Chr4g0433351 Rosa chinensis HOM05D006585 ORTHO05D007798 8.2e-30 134.0 124 53.2
FAN17G2552 Fragaria x ananassa HOM05D006585 ORTHO05D007798 1.2e-28 130.2 124 54.0
GSVIVG01007676001 Vitis vinifera HOM05D006585 ORTHO05D007798 1.5e-28 129.8 121 52.1
CANSAT01G1755 Cannabis sativa HOM05D006585 ORTHO05D007798 2.0e-28 129.4 120 53.3
ClCG08G017740 Citrullus lanatus HOM05D006585 ORTHO05D007798 2.0e-28 129.4 116 56.9
TWI75G0333 Tripterygium wilfordii HOM05D006585 ORTHO05D007798 2.2e-27 125.9 111 55.9
FAN22G0568 Fragaria x ananassa HOM05D006585 ORTHO05D007798 2.9e-27 125.6 135 50.4
Prupe.1G247600 Prunus persica HOM05D006585 ORTHO05D007798 6.5e-27 124.4 120 51.7
MD13G1097800 Malus domestica HOM05D006585 ORTHO05D007798 1.1e-26 123.6 124 54.0
Potri.010G044800 Populus trichocarpa HOM05D006585 ORTHO05D007798 1.4e-26 123.2 127 55.1
Cpa.g.sc33.3 Carica papaya HOM05D006585 ORTHO05D007798 4.2e-26 121.7 122 54.1
Prupe.1G247500 Prunus persica HOM05D006585 ORTHO05D007798 4.2e-26 121.7 126 53.2
Thecc.02G257200 Theobroma cacao HOM05D006585 ORTHO05D007798 4.2e-26 121.7 133 51.9
Lj6C811T17 Lonicera japonica HOM05D006585 ORTHO05D007798 7.2e-26 120.9 121 58.7
arahy.Tifrunner.gnm1.ann1.I6QGYY Arachis hypogaea HOM05D006585 ORTHO05D007798 9.4e-26 120.6 121 52.1
arahy.Tifrunner.gnm1.ann1.QD46ZG Arachis hypogaea HOM05D006585 ORTHO05D007798 1.2e-25 120.2 121 52.1
MD13G1097900 Malus domestica HOM05D006585 ORTHO05D007798 2.1e-25 119.4 105 54.3
Oeu049180.1 Olea europaea HOM05D006585 ORTHO05D007798 2.1e-25 119.4 134 50.0
Sed0016045 Sechium edule HOM05D006585 ORTHO05D007798 3.6e-25 118.6 123 56.9
TWI36G0027 Tripterygium wilfordii HOM05D006585 ORTHO05D007798 1.8e-24 116.3 104 58.7
TAR629G0056 Trochodendron aralioides HOM05D006585 ORTHO05D007798 1.8e-24 116.3 121 51.2
COL.COLO4_24245 Corchorus olitorius HOM05D006585 ORTHO05D002520 5.1e-24 114.8 126 50.8
Duzib248G0505 Durio zibethinus HOM05D006585 ORTHO05D007798 6.7e-24 114.4 122 50.0
MBI10_g00733_MAGBIO Magnolia biondii HOM05D006585 ORTHO05D007798 6.7e-24 114.4 125 53.6
Aqoxy5G03808 Aquilegia oxysepala HOM05D006585 ORTHO05D007798 2.6e-23 112.5 125 52.0
Sabra10G0023300 Salix brachista HOM05D000740 ORTHO05D003236 3.3e-23 112.1 127 50.4
Thecc.03G022200 Theobroma cacao HOM05D006585 ORTHO05D007798 4.4e-23 111.7 100 55.0
Gorai.005G179800 Gossypium raimondii HOM05D006585 ORTHO05D007798 5.7e-23 111.3 124 51.6
Actinidia08143 Actinidia chinensis HOM05D006585 ORTHO05D007798 9.7e-23 110.5 107 55.1
SalBow8G1297 Salvia bowleyana HOM05D006585 ORTHO05D007798 2.2e-22 109.4 125 46.4
GSVIVG01004087001 Vitis vinifera HOM05D006585 ORTHO05D007798 2.2e-22 109.4 123 52.0
ECA246G2324 Erigeron canadensis HOM05D000225 ORTHO05D002520 2.8e-22 109.0 111 55.9
THA.LOC104823651 Tarenaya hassleriana HOM05D006585 ORTHO05D007798 2.8e-22 109.0 128 48.4
VMungo0251G2192 Vigna mungo HOM05D006585 ORTHO05D007798 2.8e-22 109.0 133 45.9
Gohir.D02G159700 Gossypium hirsutum HOM05D006585 ORTHO05D007798 3.7e-22 108.6 124 50.8
Gohir.A03G136500 Gossypium hirsutum HOM05D006585 ORTHO05D007798 4.8e-22 108.2 109 52.3
Nitab4.5_0002255g0100 Nicotiana tabacum HOM05D006585 ORTHO05D007798 1.4e-21 106.7 123 49.6
Psat1g023160 Pisum sativum HOM05D006585 ORTHO05D007798 1.8e-21 106.3 123 48.0
Nitab4.5_0002552g0050 Nicotiana tabacum HOM05D006585 ORTHO05D007798 4.1e-21 105.1 121 48.8
BcaB08g37368 Brassica carinata HOM05D006585 ORTHO05D007798 6.9e-21 104.4 122 46.7
BraA09t41832Z Brassica rapa HOM05D006585 ORTHO05D007798 6.9e-21 104.4 121 47.1
Aa31LG1G4120 Aethionema arabicum HOM05D006585 ORTHO05D007798 1.2e-20 103.6 128 45.3
A09p64570 Brassica napus HOM05D006585 ORTHO05D007798 1.5e-20 103.2 127 44.9
Thhalv10007956m.g Eutrema salsugineum HOM05D006585 ORTHO05D007798 1.5e-20 103.2 122 48.4
Ca_22577_v3 Cicer arietinum L. HOM05D006585 ORTHO05D007798 2.0e-20 102.8 119 48.7
AT1G10710 Arabidopsis thaliana HOM05D006585 ORTHO05D007798 2.6e-20 102.4 124 47.6
Carub.0001s1022 Capsella rubella HOM05D006585 ORTHO05D007798 2.6e-20 102.4 127 44.9
MBI16_g23844_MAGBIO Magnolia biondii HOM05D006585 ORTHO05D007798 2.6e-20 102.4 121 49.6
Medtr8g069560 Medicago truncatula HOM05D006585 ORTHO05D007798 2.6e-20 102.4 123 46.3
Peaxi162Scf00128g00033 Petunia axillaris HOM05D006585 ORTHO05D007798 2.6e-20 102.4 131 42.0
EL10Ac6g13783 Beta vulgaris HOM05D006585 ORTHO05D007798 3.4e-20 102.1 138 47.8
CARHR010890 Cardamine hirsuta HOM05D006585 ORTHO05D007798 3.4e-20 102.1 131 45.8
BcaC07g41800 Brassica carinata HOM05D006585 ORTHO05D007798 4.5e-20 101.7 121 46.3
Dinv20613 Davidia involucrata HOM05D006585 ORTHO05D007798 4.5e-20 101.7 129 47.3
Glyma.18G143200 Glycine max HOM05D006585 ORTHO05D007798 4.5e-20 101.7 120 45.0
C08p48610 Brassica napus HOM05D006585 ORTHO05D007798 5.9e-20 101.3 121 46.3
BolC8t52400H Brassica oleracea HOM05D006585 ORTHO05D007798 5.9e-20 101.3 121 46.3
Medtr2g079800 Medicago truncatula HOM05D006585 ORTHO05D007798 5.9e-20 101.3 124 45.2
Phvul.003G063800 Phaseolus vulgaris HOM05D006585 ORTHO05D007798 5.9e-20 101.3 122 48.4
Sp1g09410 Schrenkiella parvula HOM05D006585 ORTHO05D007798 1.0e-19 100.5 124 47.6
Lsat_1_v5_gn_3_28841 Lactuca sativa HOM05D006585 ORTHO05D007798 1.3e-19 100.1 113 48.7
Lj4g0008721 Lotus japonicus HOM05D006585 ORTHO05D007798 3.8e-19 98.6 112 50.9
Nn3g16750 Nelumbo nucifera HOM05D006585 ORTHO05D007798 5.0e-19 98.2 123 48.8
AL1G21590 Arabidopsis lyrata HOM05D006585 ORTHO05D007798 6.5e-19 97.8 124 46.8
COL.COLO4_30156 Corchorus olitorius HOM05D006585 ORTHO05D007798 1.1e-18 97.1 100 49.0
HanXRQChr17g0539731 Helianthus annuus HOM05D006585 ORTHO05D007798 5.5e-18 94.7 103 45.6
DCAR_031138 Daucus carota HOM05D006585 ORTHO05D007798 9.4e-18 94.0 108 49.1
Rhsim12G0041300 Rhododendron simsii HOM05D006585 ORTHO05D007798 9.4e-18 94.0 92 57.6
Sopen05g008150 Solanum pennellii HOM05D006585 ORTHO05D007798 1.6e-17 93.2 130 40.8
Sc04g0009420 Simmondsia chinensis HOM05D006585 ORTHO05D007798 2.1e-17 92.8 130 49.2
AUR62024297 Chenopodium quinoa HOM05D006585 ORTHO05D007798 8.0e-17 90.9 108 50.9
Migut.E00193 Erythranthe guttata HOM05D006585 ORTHO05D007798 1.0e-16 90.5 131 41.2
Solyc05g013360.3 Solanum lycopersicum HOM05D006585 ORTHO05D007798 1.0e-16 90.5 130 40.0
HPP92_008331 Vanilla planifolia HOM05D006585 ORTHO05D007798 2.0e-15 86.3 113 39.8
Ah.03g133160 Amaranthus hybridus HOM05D006585 ORTHO05D007798 2.6e-15 85.9 105 44.8
Ciclev10033875m.g Citrus clementina HOM05D006585 ORTHO05D007798 3.3e-15 85.5 126 47.6
PSO063G7660 Papaver somniferum HOM05D000629 ORTHO05D007798 4.4e-15 85.1 123 39.8
SHI17754 Sapria himalayana HOM05D006585 ORTHO05D007798 5.7e-15 84.7 202 31.2
PSO832G3049 Papaver somniferum HOM05D000629 ORTHO05D007798 1.7e-14 83.2 124 41.9
SGA_v2.0_scaffold87G27084 Striga asiatica HOM05D006585 ORTHO05D007798 2.8e-14 82.4 120 41.7
EL10Ac5g10683 Beta vulgaris HOM05D006585 ORTHO05D007798 6.3e-14 81.3 106 45.3
ATR1154G038 Amborella trichopoda HOM05D006585 ORTHO05D007798 3.1e-13 79.0 110 40.0
Zm00001eb382430 Zea mays HOM05D006585 ORTHO05D007798 1.2e-12 77.0 129 38.8
SGA_v2.0_scaffold63G21726 Striga asiatica HOM05D006585 ORTHO05D007798 1.6e-12 76.6 117 39.3
ATR1154G026 Amborella trichopoda HOM05D006585 ORTHO05D007798 2.2e-11 72.8 110 37.3
Cc04_g11830 Coffea canephora HOM05D006585 ORTHO05D007798 5.5e-10 68.2 128 36.7
SEGI_25539 Sequoiadendron giganteum HOM05D006585 ORTHO05D007798 5.5e-10 68.2 106 38.7
CDE06G0796 Ceratophyllum demersum HOM05D006585 ORTHO05D007798 2.3e-08 62.8 93 39.8
Nn3g18224 Nelumbo nucifera HOM05D006585 ORTHO05D007798 3.0e-08 62.4 66 50.0
Cc11_g15560 Coffea canephora HOM05D006585 ORTHO05D007798 4.0e-08 62.0 139 34.5
Lalb_Chr16g0392231 Lupinus albus HOM05D006585 ORTHO05D007798 5.2e-08 61.6 94 40.4


User provided reference genes

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