Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0026250 Camellia sinensis var. sinensis HOM05D006546 ORTHO05D008362 2.9e-202 708.4 363 100.0
Actinidia17779 Actinidia chinensis HOM05D006546 ORTHO05D008362 3.2e-169 598.6 363 86.0
vmacro01645 Vaccinium macrocarpon HOM05D006546 ORTHO05D008362 5.5e-161 571.2 366 82.0
Lj4A701T20 Lonicera japonica HOM05D006546 ORTHO05D008362 4.1e-156 555.1 366 79.2
Rhsim11G0111500 Rhododendron simsii HOM05D006546 ORTHO05D008362 8.5e-154 547.4 360 79.7
GSVIVG01034559001 Vitis vinifera HOM05D006546 ORTHO05D008362 1.4e-151 540.0 360 79.7
Potri.005G194800 Populus trichocarpa HOM05D006546 ORTHO05D008362 4.0e-151 538.5 321 84.4
Prupe.8G036900 Prunus persica HOM05D006546 ORTHO05D008362 4.4e-150 535.0 378 74.6
SGA_v2.0_scaffold195G40788 Striga asiatica HOM05D006546 ORTHO05D008362 4.4e-150 535.0 371 74.9
Nitab4.5_0006961g0030 Nicotiana tabacum HOM05D006546 ORTHO05D008362 2.8e-149 532.3 352 77.6
Cfa018304 Carpinus fangiana HOM05D006546 ORTHO05D008362 6.3e-149 531.2 370 75.1
Nn5g28792 Nelumbo nucifera HOM05D006546 ORTHO05D008362 6.3e-149 531.2 372 75.0
TAR625G0865 Trochodendron aralioides HOM05D006546 ORTHO05D008362 6.3e-149 531.2 369 76.7
Cc10_g15070 Coffea canephora HOM05D006546 ORTHO05D008362 1.1e-148 530.4 319 82.1
Lsat_1_v5_gn_1_5280 Lactuca sativa HOM05D006546 ORTHO05D008362 1.1e-148 530.4 310 83.9
MD05G1030000 Malus domestica HOM05D006546 ORTHO05D008362 1.1e-148 530.4 372 75.5
MSTRG.1097 Avicennia marina HOM05D006546 ORTHO05D008362 2.4e-148 529.3 367 72.5
Migut.C00976 Erythranthe guttata HOM05D006546 ORTHO05D008362 4.1e-148 528.5 317 81.7
HanXRQChr04g0115661 Helianthus annuus HOM05D006546 ORTHO05D008362 4.1e-148 528.5 346 79.5
Sopen04g027680 Solanum pennellii HOM05D006546 ORTHO05D008362 5.4e-148 528.1 363 75.2
Solyc04g071700.3 Solanum lycopersicum HOM05D006546 ORTHO05D008362 7.0e-148 527.7 363 75.2
Gorai.002G231100 Gossypium raimondii HOM05D006546 ORTHO05D008362 4.5e-147 525.0 367 74.9
Atru.chr13.2063_Atru.chr13.2062 Acer truncatum HOM05D006546 ORTHO05D008362 7.7e-147 524.2 313 84.3
Manes.18G093500 Manihot esculenta HOM05D006546 ORTHO05D008362 1.0e-146 523.9 366 75.7
PGSC0003DMG400006373 Solanum tuberosum HOM05D006546 ORTHO05D008362 1.0e-146 523.9 363 73.8
TWI34G0343 Tripterygium wilfordii HOM05D006546 ORTHO05D008362 1.7e-146 523.1 365 75.1
Thecc.08G155700 Theobroma cacao HOM05D006546 ORTHO05D008362 5.0e-146 521.5 344 77.9
ECA247G1092 Erigeron canadensis HOM05D006546 ORTHO05D008362 6.5e-146 521.2 356 74.4
AUR62040584 Chenopodium quinoa HOM05D006546 ORTHO05D008362 8.6e-146 520.8 328 80.2
Haze_17787 Corylus avellana HOM05D006546 ORTHO05D008362 1.9e-145 519.6 370 74.1
COL.COLO4_03565 Corchorus olitorius HOM05D006546 ORTHO05D008362 9.5e-145 517.3 320 82.2
SalBow7G0432 Salvia bowleyana HOM05D006546 ORTHO05D008362 9.5e-145 517.3 311 81.7
CiPaw.16G009700 Carya illinoinensis HOM05D006546 ORTHO05D008362 1.2e-144 516.9 344 77.6
PGR042G3407 Punica granatum HOM05D006546 ORTHO05D008362 2.1e-144 516.2 363 74.4
arahy.Tifrunner.gnm1.ann1.PKA9SD Arachis hypogaea HOM05D006546 ORTHO05D008362 1.8e-143 513.1 331 77.3
FAN20G1322 Fragaria x ananassa HOM05D006546 ORTHO05D008362 3.0e-143 512.3 317 81.1
unitig_747.g21515 Utricularia gibba HOM05D006546 ORTHO05D008362 6.8e-143 511.1 304 82.2
Aqoxy6G00397 Aquilegia oxysepala HOM05D006546 ORTHO05D008362 8.9e-143 510.8 310 81.3
Duzib093G0633 Durio zibethinus HOM05D006546 ORTHO05D008362 4.4e-142 508.4 347 74.9
Sabra05G0148300 Salix brachista HOM05D006546 ORTHO05D008362 5.7e-142 508.1 375 72.3
FvH4_2g13270 Fragaria vesca HOM05D006546 ORTHO05D008362 9.8e-142 507.3 352 74.1
Hund17460 Selenicereus undatus HOM05D006546 ORTHO05D008362 9.8e-142 507.3 349 75.9
Nitab4.5_0001649g0020 Nicotiana tabacum HOM05D006546 ORTHO05D008362 1.3e-141 506.9 363 73.8
QL02p037672 Quercus lobata HOM05D006546 ORTHO05D008362 6.3e-141 504.6 305 83.6
Sc26g0002400 Simmondsia chinensis HOM05D006546 ORTHO05D008362 1.1e-140 503.8 308 82.1
CANSAT25G3312 Cannabis sativa HOM05D006546 ORTHO05D008362 1.8e-140 503.1 362 71.8
QL02p038646 Quercus lobata HOM05D006546 ORTHO05D008362 5.4e-140 501.5 307 83.4
VMungo0464G1775 Vigna mungo HOM05D006546 ORTHO05D008362 9.2e-140 500.7 321 78.2
Cpa.g.sc49.98 Carica papaya HOM05D006546 ORTHO05D008362 1.2e-139 500.4 368 72.0
FAN15G0764 Fragaria x ananassa HOM05D006546 ORTHO05D008362 1.2e-139 500.4 325 79.1
PSO541G2164 Papaver somniferum HOM05D006546 ORTHO05D008362 2.0e-139 499.6 345 75.9
Sed0023841 Sechium edule HOM05D006546 ORTHO05D008362 1.0e-138 497.3 347 72.9
Medtr6g037530 Medicago truncatula HOM05D006546 ORTHO05D008362 1.3e-138 496.9 313 79.6
Lj2g0010381 Lotus japonicus HOM05D006546 ORTHO05D008362 2.3e-138 496.1 322 79.5
CsaV3_6G005120 Cucumis sativus L. HOM05D006546 ORTHO05D008362 3.8e-138 495.4 369 71.0
Oeu002061.1 Olea europaea HOM05D006546 ORTHO05D008362 3.8e-138 495.4 303 80.5
Ca_03250_v3 Cicer arietinum L. HOM05D006546 ORTHO05D008362 1.1e-137 493.8 318 78.6
Phvul.004G092300 Phaseolus vulgaris HOM05D006546 ORTHO05D008362 1.9e-137 493.0 317 77.3
Psat1g100360 Pisum sativum HOM05D006546 ORTHO05D008362 1.9e-137 493.0 312 79.5
A07p28390 Brassica napus HOM05D006546 ORTHO05D008362 3.3e-137 492.3 307 79.5
MELO3C008332.2 Cucumis melo HOM05D006546 ORTHO05D008362 3.3e-137 492.3 369 70.2
BraA07t30475Z Brassica rapa HOM05D006546 ORTHO05D008362 5.6e-137 491.5 307 79.5
Glyma.16G164900 Glycine max HOM05D006546 ORTHO05D008362 9.5e-137 490.7 366 71.3
AL2G36880 Arabidopsis lyrata HOM05D006546 ORTHO05D008362 4.7e-136 488.4 369 70.5
AUR62026675 Chenopodium quinoa HOM05D006546 ORTHO05D008362 3.0e-135 485.7 297 82.2
C06p31830 Brassica napus HOM05D006546 ORTHO05D008362 4.0e-135 485.3 305 79.7
BolC6t38311H Brassica oleracea HOM05D006546 ORTHO05D008362 4.0e-135 485.3 305 79.7
AT1G76730 Arabidopsis thaliana HOM05D006546 ORTHO05D008362 5.2e-135 485.0 359 71.3
Sp5g31870 Schrenkiella parvula HOM05D006546 ORTHO05D008362 8.9e-135 484.2 306 79.4
BcaC08g45513 Brassica carinata HOM05D006546 ORTHO05D008362 1.5e-134 483.4 301 79.4
EL10Ac1g01586 Beta vulgaris HOM05D006546 ORTHO05D008362 2.0e-134 483.0 365 71.0
Aa31LG4G6800 Aethionema arabicum HOM05D006546 ORTHO05D008362 9.8e-134 480.7 359 69.6
Carub.0002s2364 Capsella rubella HOM05D006546 ORTHO05D008362 2.2e-133 479.6 359 69.9
ATR0584G152 Amborella trichopoda HOM05D006546 ORTHO05D008362 2.9e-133 479.2 304 78.0
CAN.G264.10 Capsicum annuum HOM05D006546 ORTHO05D008362 3.7e-133 478.8 281 82.9
Peaxi162Scf00079g02332 Petunia axillaris HOM05D006546 ORTHO05D008362 1.4e-132 476.9 363 70.0
Thhalv10018779m.g Eutrema salsugineum HOM05D006546 ORTHO05D008362 4.1e-132 475.3 359 69.6
BcaB02g07073 Brassica carinata HOM05D006546 ORTHO05D008362 7.8e-131 471.1 284 81.7
Zm00001eb407750 Zea mays HOM05D006546 ORTHO05D008362 1.2e-126 457.2 301 75.4
ClCG08G007080 Citrullus lanatus HOM05D006546 ORTHO05D008362 2.2e-125 453.0 439 58.3
HPP92_004409 Vanilla planifolia HOM05D006546 ORTHO05D008362 9.2e-124 447.6 306 72.9
MBI19_g24720_MAGBIO Magnolia biondii HOM05D006546 ORTHO05D008362 3.9e-122 442.2 478 53.1
Os12g0168000 Oryza sativa ssp. japonica HOM05D006546 ORTHO05D008362 7.3e-121 438.0 300 73.3
Pp3c18_17520 Physcomitrium patens HOM05D006546 ORTHO05D008362 8.9e-119 431.0 354 63.3
CBR_g53679 Chara braunii HOM05D006546 ORTHO05D008362 2.4e-116 422.9 309 69.3
AagrBONN_evm.TU.Sc2ySwM_228.4531 Anthoceros agrestis HOM05D006546 ORTHO05D008362 2.1e-115 419.9 307 68.7
Mapoly0007s0250 Marchantia polymorpha HOM05D006546 ORTHO05D008362 3.6e-112 409.1 312 66.3
SMO340G0128 Selaginella moellendorffii HOM05D006546 ORTHO05D008362 6.8e-111 404.8 288 69.4
arahy.Tifrunner.gnm1.ann1.AD4V0Z Arachis hypogaea HOM05D006546 ORTHO05D008362 3.8e-109 399.1 432 52.3
Ciclev10001828m.g Citrus clementina HOM05D006546 ORTHO05D008362 3.2e-108 396.0 304 71.1
Eucgr.F02694 Eucalyptus grandis HOM05D006546 ORTHO05D008362 1.5e-105 387.1 215 88.8
Cre13.g587450 Chlamydomonas reinhardtii HOM05D006546 ORTHO05D008362 1.2e-102 377.5 325 61.5
FAN27G2273 Fragaria x ananassa HOM05D006546 ORTHO05D008362 2.5e-97 359.8 210 86.2
CsaV3_6G005110 Cucumis sativus L. HOM05D006546 ORTHO05D008362 1.6e-91 340.5 369 54.7
CARHR070270 Cardamine hirsuta HOM05D006546 ORTHO05D008362 1.8e-90 337.0 200 84.0
MCO03G555 Micromonas commoda HOM05D006546 ORTHO05D008362 1.5e-89 334.0 317 55.2
Dinv41054 Davidia involucrata HOM05D006546 ORTHO05D008362 4.8e-88 328.9 170 95.3
Ah.14g079510 Amaranthus hybridus HOM05D006546 ORTHO05D008362 7.1e-84 315.1 202 80.2
Gohir.A01G197500 Gossypium hirsutum HOM05D006546 ORTHO05D008362 8.7e-82 308.1 251 67.3
Gohir.D01G187700 Gossypium hirsutum HOM05D006546 ORTHO05D008362 8.7e-82 308.1 251 67.3
Ah.00g001170 Amaranthus hybridus HOM05D006546 ORTHO05D008362 1.4e-79 300.8 193 80.3
Ah.14g079490 Amaranthus hybridus HOM05D006546 ORTHO05D008362 3.1e-79 299.7 193 79.8
TPR.G39968 Trifolium pratense HOM05D006546 ORTHO05D008362 6.9e-79 298.5 163 92.0
FAN24G0701 Fragaria x ananassa HOM05D006546 ORTHO05D008362 2.3e-74 283.5 189 79.9
RcHm_v2.0_Chr6g0274681 Rosa chinensis HOM05D006546 ORTHO05D008362 5.1e-74 282.3 167 83.2
SMO137G0185 Selaginella moellendorffii HOM05D006546 ORTHO05D008362 3.7e-72 276.2 257 52.5
TPR.G28004 Trifolium pratense HOM05D006546 ORTHO05D008362 8.2e-72 275.0 307 51.5
THA.LOC104810664 Tarenaya hassleriana HOM05D006546 ORTHO05D008362 2.5e-68 263.5 149 86.6
Eucgr.K02158 Eucalyptus grandis HOM05D006546 ORTHO05D008362 9.7e-65 251.5 188 69.1
Glyma.02G080402 Glycine max HOM05D006546 ORTHO05D008362 7.7e-62 241.9 150 76.7
SMO182G0010 Selaginella moellendorffii HOM05D006546 ORTHO05D008362 2.1e-59 233.8 279 45.9
THA.LOC104803355 Tarenaya hassleriana HOM05D006546 ORTHO05D008362 3.6e-59 233.0 216 59.3
THA.LOC104820721 Tarenaya hassleriana HOM05D006546 ORTHO05D008362 2.0e-54 217.2 141 73.8
Ah.04g160680 Amaranthus hybridus HOM05D006546 ORTHO05D008362 2.0e-46 190.7 108 88.0
SEGI_13550 Sequoiadendron giganteum HOM05D006546 ORTHO05D008362 3.1e-39 166.8 97 78.4
CDE08G0315 Ceratophyllum demersum HOM05D006546 ORTHO05D008362 4.0e-34 149.8 111 66.7
ECA247G1774 Erigeron canadensis HOM05D006546 ORTHO05D000004 2.2e-32 144.1 80 88.8
MCO02G484 Micromonas commoda HOM05D006546 ORTHO05D008362 3.7e-32 143.3 238 36.1
Hund17461 Selenicereus undatus HOM05D000185 ORTHO05D000105 2.6e-25 120.6 258 34.9
SMO063G0001 Selaginella moellendorffii HOM05D006546 ORTHO05D008362 4.5e-22 109.8 102 51.0
Medtr6g037560 Medicago truncatula HOM05D006546 ORTHO05D008362 1.9e-15 87.8 48 81.2
AagrBONN_evm.TU.Sc2ySwM_228.4528 Anthoceros agrestis HOM05D006546 ORTHO05D008362 2.8e-11 73.9 47 78.7
Sabra02G0052700 Salix brachista HOM05D003387 ORTHO05D005400 8.9e-10 68.9 144 38.2


User provided reference genes

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