Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0026249 Camellia sinensis var. sinensis HOM05D004819 ORTHO05D005654 9.5e-62 240.0 118 100.0
CSS0034063 Camellia sinensis var. sinensis HOM05D004819 ORTHO05D005654 4.4e-35 151.4 97 83.5
GSVIVG01034917001 Vitis vinifera HOM05D004819 ORTHO05D005654 8.4e-34 147.1 99 76.8
Glyma.07G238900 Glycine max HOM05D004819 ORTHO05D005654 4.1e-33 144.8 97 77.3
VMungo1215G1911 Vigna mungo HOM05D004819 ORTHO05D005654 7.1e-33 144.1 97 77.3
GSVIVG01034978001 Vitis vinifera HOM05D004819 ORTHO05D005654 7.1e-33 144.1 97 77.3
Thecc.04G302500 Theobroma cacao HOM05D004819 ORTHO05D005654 1.2e-32 143.3 97 78.4
TWI53G0610 Tripterygium wilfordii HOM05D004819 ORTHO05D005654 1.2e-32 143.3 97 76.3
Duzib212G0926 Durio zibethinus HOM05D004819 ORTHO05D005654 2.1e-32 142.5 97 77.3
MSTRG.10156 Avicennia marina HOM05D004819 ORTHO05D005654 3.5e-32 141.7 97 79.4
Ca_21436_v3 Cicer arietinum L. HOM05D004819 ORTHO05D005654 3.5e-32 141.7 97 75.3
COL.COLO4_34600 Corchorus olitorius HOM05D004819 ORTHO05D005654 3.5e-32 141.7 97 77.3
Phvul.003G115600 Phaseolus vulgaris HOM05D004819 ORTHO05D005654 3.5e-32 141.7 97 75.3
Cfa015302 Carpinus fangiana HOM05D004819 ORTHO05D005654 4.6e-32 141.4 97 76.3
CiPaw.01G137100 Carya illinoinensis HOM05D004819 ORTHO05D005654 4.6e-32 141.4 97 77.3
DCAR_030463 Daucus carota HOM05D004819 ORTHO05D005654 4.6e-32 141.4 97 75.3
TPR.G25430 Trifolium pratense HOM05D004819 ORTHO05D005654 4.6e-32 141.4 97 74.2
Glyma.17G034800 Glycine max HOM05D004819 ORTHO05D005654 6.0e-32 141.0 97 75.3
TWI09G1587 Tripterygium wilfordii HOM05D004819 ORTHO05D005654 7.8e-32 140.6 97 76.3
Lalb_Chr07g0182051 Lupinus albus HOM05D004819 ORTHO05D005654 1.0e-31 140.2 97 75.3
Haze_01312 Corylus avellana HOM05D004819 ORTHO05D005654 1.3e-31 139.8 108 69.4
Oeu046577.1 Olea europaea HOM05D004819 ORTHO05D005654 1.3e-31 139.8 100 75.0
MD16G1152500 Malus domestica HOM05D004819 ORTHO05D005654 1.7e-31 139.4 97 76.3
SGA_v2.0_scaffold104G30069 Striga asiatica HOM05D004819 ORTHO05D005654 1.7e-31 139.4 97 77.3
Lj4g0007943 Lotus japonicus HOM05D004819 ORTHO05D005654 2.3e-31 139.0 97 74.2
Psat4g022840 Pisum sativum HOM05D004819 ORTHO05D005654 2.3e-31 139.0 97 75.3
Rhsim04G0240100 Rhododendron simsii HOM05D004819 ORTHO05D005654 2.3e-31 139.0 97 75.3
QL06p012610 Quercus lobata HOM05D004819 ORTHO05D005654 3.0e-31 138.7 97 75.3
Lj3C833T2 Lonicera japonica HOM05D004819 ORTHO05D005654 3.9e-31 138.3 97 75.3
Prupe.1G115700 Prunus persica HOM05D004819 ORTHO05D005654 5.1e-31 137.9 97 75.3
Ciclev10004336m.g Citrus clementina HOM05D004819 ORTHO05D005654 6.6e-31 137.5 97 72.2
Dinv15153 Davidia involucrata HOM05D004819 ORTHO05D005654 6.6e-31 137.5 97 74.2
Sc09g0007260 Simmondsia chinensis HOM05D004819 ORTHO05D005654 6.6e-31 137.5 97 73.2
vmacro08030 Vaccinium macrocarpon HOM05D004819 ORTHO05D005654 6.6e-31 137.5 97 74.2
Actinidia40384 Actinidia chinensis HOM05D004819 ORTHO05D005654 8.6e-31 137.1 97 74.2
arahy.Tifrunner.gnm1.ann1.HD9JLY Arachis hypogaea HOM05D004819 ORTHO05D005654 8.6e-31 137.1 97 73.2
arahy.Tifrunner.gnm1.ann1.ZA4S8T Arachis hypogaea HOM05D004819 ORTHO05D005654 8.6e-31 137.1 97 73.2
Cpa.g.sc9.47 Carica papaya HOM05D004819 ORTHO05D005654 8.6e-31 137.1 97 73.2
Atru.chr4.3039 Acer truncatum HOM05D004819 ORTHO05D005654 1.1e-30 136.7 97 74.2
Migut.G00071 Erythranthe guttata HOM05D004819 ORTHO05D005654 1.1e-30 136.7 97 76.3
HanXRQChr02g0048601 Helianthus annuus HOM05D004819 ORTHO05D005654 1.1e-30 136.7 97 72.2
Manes.03G205800 Manihot esculenta HOM05D004819 ORTHO05D005654 1.1e-30 136.7 97 73.2
SalBow8G2376 Salvia bowleyana HOM05D004819 ORTHO05D005654 1.5e-30 136.3 97 73.2
Lsat_1_v5_gn_6_1101 Lactuca sativa HOM05D004819 ORTHO05D005654 1.9e-30 136.0 97 72.2
unitig_88.g27704 Utricularia gibba HOM05D002812 ORTHO05D005654 1.9e-30 136.0 97 75.3
ECA233G5711 Erigeron canadensis HOM05D004819 ORTHO05D005654 2.5e-30 135.6 97 71.1
Gohir.A10G173100 Gossypium hirsutum HOM05D004819 ORTHO05D005654 3.3e-30 135.2 97 72.2
Gohir.D10G179600 Gossypium hirsutum HOM05D004819 ORTHO05D005654 4.3e-30 134.8 97 72.2
Peaxi162Scf00228g00333 Petunia axillaris HOM05D004819 ORTHO05D005654 5.6e-30 134.4 97 73.2
Potri.010G146800 Populus trichocarpa HOM05D004819 ORTHO05D005654 5.6e-30 134.4 97 73.2
EL10Ac3g05522 Beta vulgaris HOM05D004819 ORTHO05D005654 7.3e-30 134.0 97 72.2
Manes.15G000800 Manihot esculenta HOM05D004819 ORTHO05D005654 9.6e-30 133.7 97 72.2
Gorai.011G200900 Gossypium raimondii HOM05D004819 ORTHO05D005654 1.2e-29 133.3 97 71.1
RcHm_v2.0_Chr4g0425571 Rosa chinensis HOM05D004819 ORTHO05D005654 1.2e-29 133.3 97 72.2
Cc03_g00710 Coffea canephora HOM05D004819 ORTHO05D005654 2.1e-29 132.5 97 74.2
Hund03132 Selenicereus undatus HOM05D004819 ORTHO05D005654 2.8e-29 132.1 97 70.1
CANSAT78G1713 Cannabis sativa HOM05D004819 ORTHO05D005654 3.6e-29 131.7 97 72.2
AUR62016223 Chenopodium quinoa HOM05D004819 ORTHO05D005654 3.6e-29 131.7 97 70.1
FAN07G2526 Fragaria x ananassa HOM05D004819 ORTHO05D005654 4.7e-29 131.3 97 72.2
FvH4_4g19930 Fragaria vesca HOM05D004819 ORTHO05D005654 8.1e-29 130.6 97 72.2
FAN12G0990 Fragaria x ananassa HOM05D004819 ORTHO05D005654 8.1e-29 130.6 97 72.2
Nitab4.5_0000177g0090 Nicotiana tabacum HOM05D004819 ORTHO05D005654 8.1e-29 130.6 97 72.2
Sopen01g024570 Solanum pennellii HOM05D004819 ORTHO05D005654 8.1e-29 130.6 97 71.1
PGSC0003DMG400001205 Solanum tuberosum HOM05D004819 ORTHO05D005654 8.1e-29 130.6 97 71.1
PSO210G2958 Papaver somniferum HOM05D004819 ORTHO05D005654 1.1e-28 130.2 97 70.1
PSO761G0636 Papaver somniferum HOM05D004819 ORTHO05D005654 1.1e-28 130.2 97 70.1
Sabra10G0113000 Salix brachista HOM05D004819 ORTHO05D005654 1.4e-28 129.8 113 65.5
Nitab4.5_0000931g0050 Nicotiana tabacum HOM05D004819 ORTHO05D005654 1.8e-28 129.4 97 71.1
PGR004G0637 Punica granatum HOM05D004819 ORTHO05D005654 1.8e-28 129.4 94 72.3
Lsat_1_v5_gn_1_41600 Lactuca sativa HOM05D004819 ORTHO05D005654 2.4e-28 129.0 97 68.0
BcaC06g33458 Brassica carinata HOM05D004819 ORTHO05D005654 4.0e-28 128.3 96 66.7
C07p47720 Brassica napus HOM05D004819 ORTHO05D005654 4.0e-28 128.3 96 66.7
BolC7t45297H Brassica oleracea HOM05D004819 ORTHO05D005654 4.0e-28 128.3 96 66.7
Nn2g14951 Nelumbo nucifera HOM05D004819 ORTHO05D005654 5.2e-28 127.9 97 69.1
Nn2g14956 Nelumbo nucifera HOM05D004819 ORTHO05D005654 5.2e-28 127.9 97 69.1
Solyc01g058730.4 Solanum lycopersicum HOM05D004819 ORTHO05D005654 6.9e-28 127.5 97 70.1
Nn4g25546 Nelumbo nucifera HOM05D004819 ORTHO05D005654 8.9e-28 127.1 97 69.1
Aa31LG10G5910 Aethionema arabicum HOM05D004819 ORTHO05D005654 1.2e-27 126.7 96 64.6
TAR365G0460 Trochodendron aralioides HOM05D004819 ORTHO05D005654 1.2e-27 126.7 97 68.0
Ah.05g176730 Amaranthus hybridus HOM05D004819 ORTHO05D005654 1.5e-27 126.3 97 67.0
A03p49650 Brassica napus HOM05D004819 ORTHO05D005654 1.5e-27 126.3 96 65.6
BraA03t14064Z Brassica rapa HOM05D004819 ORTHO05D005654 1.5e-27 126.3 96 65.6
Eucgr.H04185 Eucalyptus grandis HOM05D004819 ORTHO05D005654 1.5e-27 126.3 97 68.0
BcaC06g32994 Brassica carinata HOM05D004819 ORTHO05D005654 2.6e-27 125.6 96 65.6
BcaC09g50317 Brassica carinata HOM05D004819 ORTHO05D005654 2.6e-27 125.6 96 66.7
C01p26720 Brassica napus HOM05D004819 ORTHO05D005654 2.6e-27 125.6 96 66.7
BolC1t02613H Brassica oleracea HOM05D004819 ORTHO05D005654 2.6e-27 125.6 96 66.7
Eucgr.H04055 Eucalyptus grandis HOM05D004819 ORTHO05D005654 2.6e-27 125.6 97 68.0
AT4G16180 Arabidopsis thaliana HOM05D004819 ORTHO05D005654 3.4e-27 125.2 96 64.6
CARHR222550 Cardamine hirsuta HOM05D004819 ORTHO05D005654 3.4e-27 125.2 96 65.6
Sp7g14690 Schrenkiella parvula HOM05D004819 ORTHO05D005654 3.4e-27 125.2 96 65.6
Aqoxy2G02702 Aquilegia oxysepala HOM05D004819 ORTHO05D005654 4.4e-27 124.8 96 68.8
Carub.0007s2536 Capsella rubella HOM05D004819 ORTHO05D005654 4.4e-27 124.8 96 65.6
MELO3C006720.2 Cucumis melo HOM05D004819 ORTHO05D005654 4.4e-27 124.8 97 69.1
SHI00124 Sapria himalayana HOM05D004819 ORTHO05D005654 4.4e-27 124.8 97 68.0
AL7G38910 Arabidopsis lyrata HOM05D004819 ORTHO05D005654 5.8e-27 124.4 96 64.6
A01p21370 Brassica napus HOM05D004819 ORTHO05D005654 5.8e-27 124.4 96 65.6
BraA01t02042Z Brassica rapa HOM05D004819 ORTHO05D005654 5.8e-27 124.4 96 65.6
ClCG05G006610 Citrullus lanatus HOM05D004819 ORTHO05D005654 7.6e-27 124.0 97 68.0
Os03g0310500 Oryza sativa ssp. japonica HOM05D004819 ORTHO05D005654 9.9e-27 123.6 97 67.0
BcaNung00215 Brassica carinata HOM05D004819 ORTHO05D005654 1.7e-26 122.9 96 64.6
Oeu052162.4 Olea europaea HOM05D004819 ORTHO05D005654 2.9e-26 122.1 133 55.6
CsaV3_3G015230 Cucumis sativus L. HOM05D004819 ORTHO05D005654 3.8e-26 121.7 97 68.0
Sed0001798 Sechium edule HOM05D004819 ORTHO05D005654 3.8e-26 121.7 97 68.0
Sed0007022 Sechium edule HOM05D004819 ORTHO05D005654 3.8e-26 121.7 97 67.0
THA.LOC104802608 Tarenaya hassleriana HOM05D004819 ORTHO05D005654 4.9e-26 121.3 96 64.6
CDE02G0522 Ceratophyllum demersum HOM05D004819 ORTHO05D005654 6.4e-26 120.9 96 64.6
Thhalv10024420m.g Eutrema salsugineum HOM05D004819 ORTHO05D005654 6.4e-26 120.9 96 63.5
HanXRQChr11g0353871 Helianthus annuus HOM05D004819 ORTHO05D005654 6.4e-26 120.9 97 66.0
ATR0693G033 Amborella trichopoda HOM05D004819 ORTHO05D005654 8.4e-26 120.6 97 64.9
Zm00001eb014900 Zea mays HOM05D004819 ORTHO05D005654 1.6e-24 116.3 97 66.0
AagrBONN_evm.TU.Sc2ySwM_362.583 Anthoceros agrestis HOM05D004819 ORTHO05D005654 1.2e-19 100.1 97 54.6
Mapoly0066s0100 Marchantia polymorpha HOM05D004819 ORTHO05D005654 2.0e-19 99.4 96 54.2
SMO298G0056 Selaginella moellendorffii HOM05D004819 ORTHO05D005654 2.0e-19 99.4 98 53.1
Pp3c5_14560 Physcomitrium patens HOM05D004819 ORTHO05D005654 9.9e-19 97.1 97 50.5
Pp3c16_6520 Physcomitrium patens HOM05D004819 ORTHO05D005654 2.2e-18 95.9 97 51.5
Psat0s3230g0160 Pisum sativum HOM05D004819 ORTHO05D005654 2.7e-16 89.0 69 68.1
PGSC0003DMG402014601 Solanum tuberosum HOM05D004819 ORTHO05D005654 6.7e-15 84.3 80 60.0
AUR62039265 Chenopodium quinoa HOM05D004819 ORTHO05D005654 1.8e-12 76.3 40 82.5
Zm00001eb339670 Zea mays HOM05D004819 ORTHO05D005654 4.2e-09 65.1 40 77.5
CAN.G244.3 Capsicum annuum HOM05D004819 ORTHO05D005654 5.5e-09 64.7 32 90.6
Rhsim05G0134500 Rhododendron simsii HOM05D004819 ORTHO05D005654 8.7e-07 57.4 34 85.3
GSVIVG01034928001 Vitis vinifera HOM05D004819 ORTHO05D005654 4.3e-06 55.1 29 82.8


User provided reference genes

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