Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0026232 Camellia sinensis var. sinensis HOM05D000823 ORTHO05D000088 7.9e-94 347.1 169 100.0
CSS0046906 Camellia sinensis var. sinensis HOM05D000823 ORTHO05D000088 3.5e-86 321.6 169 92.9
CSS0037658 Camellia sinensis var. sinensis HOM05D000823 ORTHO05D000088 4.7e-62 241.5 160 77.5
Cfa018483 Carpinus fangiana HOM05D000823 ORTHO05D000088 2.1e-22 109.8 150 40.0
Dinv39357 Davidia involucrata HOM05D000823 ORTHO05D000088 2.1e-22 109.8 150 40.7
Prupe.1G388200 Prunus persica HOM05D000823 ORTHO05D000088 1.4e-21 107.1 150 40.7
Haze_17590 Corylus avellana HOM05D000823 ORTHO05D000088 1.8e-21 106.7 130 41.5
Rhsim07G0234100 Rhododendron simsii HOM05D000823 ORTHO05D000088 2.3e-21 106.3 133 41.4
CiPaw.15G066400 Carya illinoinensis HOM05D000823 ORTHO05D000088 3.1e-21 105.9 130 43.8
QL02p006444 Quercus lobata HOM05D000823 ORTHO05D000088 3.1e-21 105.9 150 38.7
HanXRQChr04g0104181 Helianthus annuus HOM05D000823 ORTHO05D000088 4.0e-21 105.5 168 37.5
Nn6g32134 Nelumbo nucifera HOM05D000823 ORTHO05D000088 1.2e-20 104.0 141 41.8
Cpa.g.sc357.1 Carica papaya HOM05D000823 ORTHO05D000088 1.5e-20 103.6 150 38.7
Hma1.2p1_0260F.1_g104520 Hydrangea macrophylla HOM05D000823 ORTHO05D000088 3.4e-20 102.4 151 35.8
Lsat_1_v5_gn_1_19200 Lactuca sativa HOM05D000823 ORTHO05D000088 3.4e-20 102.4 157 38.2
Hma1.2p1_0023F.1_g015270 Hydrangea macrophylla HOM05D000823 ORTHO05D000088 7.5e-20 101.3 145 39.3
Glyma.14G079200 Glycine max HOM05D000823 ORTHO05D000088 1.3e-19 100.5 146 39.0
Lj5g0027331 Lotus japonicus HOM05D000823 ORTHO05D000088 1.3e-19 100.5 145 40.7
Potri.014G036800 Populus trichocarpa HOM05D000823 ORTHO05D000088 2.2e-19 99.8 123 43.9
GSVIVG01009586001 Vitis vinifera HOM05D000823 ORTHO05D000088 2.9e-19 99.4 143 38.5
Actinidia38035 Actinidia chinensis HOM05D000823 ORTHO05D000088 4.9e-19 98.6 145 40.0
Nn6g32136 Nelumbo nucifera HOM05D000823 ORTHO05D000088 1.9e-18 96.7 122 42.6
ECA247G3085 Erigeron canadensis HOM05D000823 ORTHO05D000088 3.2e-18 95.9 149 37.6
EL10Ac1g01749 Beta vulgaris HOM05D000823 ORTHO05D000088 5.4e-18 95.1 126 42.1
Manes.05G168900 Manihot esculenta HOM05D000823 ORTHO05D000088 5.4e-18 95.1 123 42.3
Sc15g0006570 Simmondsia chinensis HOM05D000823 ORTHO05D000088 7.0e-18 94.7 134 39.6
Migut.C00649 Erythranthe guttata HOM05D000823 ORTHO05D000088 9.2e-18 94.4 162 35.8
Thecc.08G016800 Theobroma cacao HOM05D000823 ORTHO05D000088 9.2e-18 94.4 149 38.3
Sabra14G0026500 Salix brachista HOM05D000823 ORTHO05D000088 1.2e-17 94.0 123 42.3
VMungo0647G0862 Vigna mungo HOM05D000823 ORTHO05D000088 1.6e-17 93.6 147 38.8
FvH4_2g40640 Fragaria vesca HOM05D000823 ORTHO05D000088 2.7e-17 92.8 163 35.0
FAN27G1265 Fragaria x ananassa HOM05D000823 ORTHO05D000088 3.5e-17 92.4 163 35.0
MD15G1034200 Malus domestica HOM05D000823 ORTHO05D000088 4.6e-17 92.0 157 35.7
RcHm_v2.0_Chr6g0300031 Rosa chinensis HOM05D000823 ORTHO05D000088 4.6e-17 92.0 157 35.0
Nn5g29398 Nelumbo nucifera HOM05D000823 ORTHO05D000088 6.0e-17 91.7 169 36.1
CANSAT25G0071 Cannabis sativa HOM05D000823 ORTHO05D000088 7.8e-17 91.3 142 35.9
FAN15G0917 Fragaria x ananassa HOM05D000823 ORTHO05D000088 1.3e-16 90.5 163 35.0
MD08G1039600 Malus domestica HOM05D000823 ORTHO05D000088 1.7e-16 90.1 144 38.2
Nitab4.5_0002280g0040 Nicotiana tabacum HOM05D000823 ORTHO05D000088 1.7e-16 90.1 149 36.2
Nitab4.5_0000068g0140 Nicotiana tabacum HOM05D000823 ORTHO05D000088 3.0e-16 89.4 148 36.5
Hund26609 Selenicereus undatus HOM05D000823 ORTHO05D000088 3.0e-16 89.4 135 37.8
COL.COLO4_26426 Corchorus olitorius HOM05D000823 ORTHO05D000088 6.6e-16 88.2 152 36.2
Peaxi162Scf01514g00024 Petunia axillaris HOM05D000823 ORTHO05D000088 8.6e-16 87.8 128 38.3
Psat6g011480 Pisum sativum HOM05D000823 ORTHO05D000088 1.5e-15 87.0 126 38.1
Phvul.001G018500 Phaseolus vulgaris HOM05D000823 ORTHO05D000088 2.5e-15 86.3 129 38.8
Ca_13317_v3 Cicer arietinum L. HOM05D000823 ORTHO05D000088 3.3e-15 85.9 148 35.1
Gohir.D02G093100 Gossypium hirsutum HOM05D000823 ORTHO05D000088 4.3e-15 85.5 150 36.0
Gorai.005G105400 Gossypium raimondii HOM05D000823 ORTHO05D000088 4.3e-15 85.5 150 36.0
SalBow7G0768 Salvia bowleyana HOM05D000823 ORTHO05D000088 5.6e-15 85.1 147 34.0
SGA_v2.0_scaffold82G26218 Striga asiatica HOM05D000823 ORTHO05D000088 5.6e-15 85.1 168 32.7
Nn8g40849 Nelumbo nucifera HOM05D000823 ORTHO05D000088 1.2e-14 84.0 146 36.3
TPR.G13699 Trifolium pratense HOM05D000823 ORTHO05D000088 1.2e-14 84.0 126 37.3
Atru.chr13.594 Acer truncatum HOM05D000823 ORTHO05D000088 1.6e-14 83.6 118 35.6
Medtr1g021270 Medicago truncatula HOM05D000823 ORTHO05D000088 1.6e-14 83.6 126 37.3
Glyma.17G245900 Glycine max HOM05D000823 ORTHO05D000088 2.1e-14 83.2 122 37.7
Solyc04g079590.3 Solanum lycopersicum HOM05D000823 ORTHO05D000088 2.1e-14 83.2 164 33.5
TWI12G0966 Tripterygium wilfordii HOM05D000823 ORTHO05D000088 2.8e-14 82.8 124 37.9
MSTRG.1316 Avicennia marina HOM05D000823 ORTHO05D000088 3.6e-14 82.4 155 34.2
CAN.G371.85 Capsicum annuum HOM05D000823 ORTHO05D000088 3.1e-13 79.3 149 34.2
Cc10_g03680 Coffea canephora HOM05D000823 ORTHO05D000088 4.0e-13 79.0 136 37.5
vmacro04480 Vaccinium macrocarpon HOM05D000823 ORTHO05D000088 5.2e-13 78.6 106 38.7
Gohir.A03G116300 Gossypium hirsutum HOM05D000823 ORTHO05D000088 6.8e-13 78.2 142 35.2
THA.LOC104803403 Tarenaya hassleriana HOM05D000823 ORTHO05D000088 6.8e-13 78.2 103 41.7
Ah.11g043200 Amaranthus hybridus HOM05D000823 ORTHO05D000088 8.9e-13 77.8 123 37.4
Eucgr.F02399 Eucalyptus grandis HOM05D000823 ORTHO05D000088 8.9e-13 77.8 118 35.6
MBI16_g19884_MAGBIO Magnolia biondii HOM05D000823 ORTHO05D000088 8.9e-13 77.8 108 36.1
MELO3C018249.2 Cucumis melo HOM05D000823 ORTHO05D000088 1.5e-12 77.0 124 35.5
Ciclev10000881m.g Citrus clementina HOM05D000823 ORTHO05D000088 2.0e-12 76.6 123 35.8
Lalb_Chr22g0355281 Lupinus albus HOM05D000823 ORTHO05D000088 2.0e-12 76.6 129 32.6
AUR62033880 Chenopodium quinoa HOM05D000823 ORTHO05D000088 2.6e-12 76.3 109 38.5
PGR031G0338 Punica granatum HOM05D000823 ORTHO05D000088 2.6e-12 76.3 118 33.9
Duzib093G1908 Durio zibethinus HOM05D000823 ORTHO05D000088 5.8e-12 75.1 108 41.7
arahy.Tifrunner.gnm1.ann1.8D6Z2X Arachis hypogaea HOM05D000823 ORTHO05D000088 7.5e-12 74.7 146 32.2
arahy.Tifrunner.gnm1.ann1.NFB9X0 Arachis hypogaea HOM05D000823 ORTHO05D000088 7.5e-12 74.7 146 32.2
ClCG05G019470 Citrullus lanatus HOM05D000823 ORTHO05D000088 1.3e-11 73.9 127 37.0
Peaxi162Scf00392g00315 Petunia axillaris HOM05D000823 ORTHO05D000088 1.1e-10 70.9 145 34.5
PGR083G0587 Punica granatum HOM05D000823 ORTHO05D000088 2.4e-10 69.7 115 35.7
CsaV3_3G044580 Cucumis sativus L. HOM05D000823 ORTHO05D000088 3.2e-10 69.3 150 33.3
DCAR_012760 Daucus carota HOM05D000823 ORTHO05D000088 3.2e-10 69.3 119 34.5
Sopen04g033170 Solanum pennellii HOM05D000823 ORTHO05D000088 1.2e-09 67.4 134 32.8
ATR0796G188 Amborella trichopoda HOM05D000823 ORTHO05D000088 6.0e-09 65.1 103 29.1
PGR083G0539 Punica granatum HOM05D000823 ORTHO05D000088 1.3e-08 63.9 108 33.3
FAN18G2538 Fragaria x ananassa HOM05D000823 ORTHO05D000088 5.1e-08 62.0 118 30.5
CAN.G1342.9 Capsicum annuum HOM05D000888 ORTHO05D000740 6.6e-08 61.6 139 30.9
Nitab4.5_0000555g0070 Nicotiana tabacum HOM05D000888 ORTHO05D000740 6.6e-08 61.6 121 29.8
Aqoxy6G00930 Aquilegia oxysepala HOM05D000823 ORTHO05D000088 1.1e-07 60.8 121 28.1
CAN.G1238.29 Capsicum annuum HOM05D000888 ORTHO05D000740 1.1e-07 60.8 131 29.8
MBI16_g19885_MAGBIO Magnolia biondii HOM05D000823 ORTHO05D000088 1.1e-07 60.8 146 27.4
CAN.G673.5 Capsicum annuum HOM05D000888 ORTHO05D000740 1.5e-07 60.5 172 26.7
HPP92_003368 Vanilla planifolia HOM05D000823 ORTHO05D000088 2.5e-07 59.7 111 37.8
PGR044G2084 Punica granatum HOM05D000823 ORTHO05D000088 3.3e-07 59.3 118 31.4
Nn8g39858 Nelumbo nucifera HOM05D000823 ORTHO05D000088 4.3e-07 58.9 117 33.3
Nitab4.5_0000555g0020 Nicotiana tabacum HOM05D000888 ORTHO05D000740 4.3e-07 58.9 128 31.2
Nitab4.5_0008877g0020 Nicotiana tabacum HOM05D000888 ORTHO05D000740 4.3e-07 58.9 120 31.7
PSO170G0378 Papaver somniferum HOM05D000823 ORTHO05D000088 4.3e-07 58.9 89 40.4
Peaxi162Scf00192g01414 Petunia axillaris HOM05D000888 ORTHO05D000740 4.3e-07 58.9 99 36.4
MD08G1039500 Malus domestica HOM05D000823 ORTHO05D000088 5.6e-07 58.5 91 41.8
Oeu028453.1 Olea europaea HOM05D000823 ORTHO05D000088 5.6e-07 58.5 68 41.2
Prupe.4G206300 Prunus persica HOM05D000823 ORTHO05D000088 5.6e-07 58.5 125 35.2
CAN.G1632.18 Capsicum annuum HOM05D000888 ORTHO05D000740 7.3e-07 58.2 168 27.4
CAN.G757.7 Capsicum annuum HOM05D000888 ORTHO05D000740 7.3e-07 58.2 146 30.1
MD04G1034600 Malus domestica HOM05D000823 ORTHO05D000088 7.3e-07 58.2 120 34.2
Prupe.1G388000 Prunus persica HOM05D000823 ORTHO05D000088 7.3e-07 58.2 88 31.8
FvH4_5g30470 Fragaria vesca HOM05D000823 ORTHO05D000088 9.5e-07 57.8 89 32.6
FAN08G1659 Fragaria x ananassa HOM05D000823 ORTHO05D000088 9.5e-07 57.8 75 36.0
Nitab4.5_0007342g0030 Nicotiana tabacum HOM05D000888 ORTHO05D000740 9.5e-07 57.8 104 31.7
Nitab4.5_0012696g0010 Nicotiana tabacum HOM05D000888 ORTHO05D000740 9.5e-07 57.8 102 32.4
Prupe.4G178300 Prunus persica HOM05D000823 ORTHO05D000088 9.5e-07 57.8 144 31.2
Aqoxy6G00928 Aquilegia oxysepala HOM05D000823 ORTHO05D000088 1.2e-06 57.4 79 36.7
CAN.G241.28 Capsicum annuum HOM05D000888 ORTHO05D000740 1.6e-06 57.0 117 31.6
Prupe.4G178000 Prunus persica HOM05D000823 ORTHO05D000088 1.6e-06 57.0 116 35.3
Sopen08g002440 Solanum pennellii HOM05D000888 ORTHO05D000740 1.6e-06 57.0 152 24.3
CAN.G757.9 Capsicum annuum HOM05D000888 ORTHO05D000740 2.8e-06 56.2 129 28.7
SEGI_18580 Sequoiadendron giganteum HOM05D000823 ORTHO05D000088 2.8e-06 56.2 104 30.8
Sopen08g002190 Solanum pennellii HOM05D000888 ORTHO05D000740 2.8e-06 56.2 135 27.4
Thecc.01G046600 Theobroma cacao HOM05D000823 ORTHO05D000088 2.8e-06 56.2 169 26.6
MD03G1230100 Malus domestica HOM05D000823 ORTHO05D000088 3.6e-06 55.8 124 29.8
Nn7g36387 Nelumbo nucifera HOM05D000823 ORTHO05D000088 3.6e-06 55.8 113 31.0
Nitab4.5_0010282g0010 Nicotiana tabacum HOM05D000888 ORTHO05D000740 3.6e-06 55.8 128 27.3
Potri.014G036900 Populus trichocarpa HOM05D000823 ORTHO05D000088 3.6e-06 55.8 128 34.4
Sopen08g002180 Solanum pennellii HOM05D000888 ORTHO05D000740 3.6e-06 55.8 149 27.5
Dinv00373 Davidia involucrata HOM05D000888 ORTHO05D000740 4.7e-06 55.5 99 33.3
Dinv01509 Davidia involucrata HOM05D000888 ORTHO05D000740 4.7e-06 55.5 99 33.3
FAN13G1961 Fragaria x ananassa HOM05D000823 ORTHO05D000088 4.7e-06 55.5 89 31.5
Nitab4.5_0000555g0110 Nicotiana tabacum HOM05D000888 ORTHO05D000740 4.7e-06 55.5 111 30.6
Nitab4.5_0012696g0020 Nicotiana tabacum HOM05D000888 ORTHO05D000740 4.7e-06 55.5 145 26.9
Potri.002G129800 Populus trichocarpa HOM05D000823 ORTHO05D000088 4.7e-06 55.5 89 36.0
Sopen08g002250 Solanum pennellii HOM05D000888 ORTHO05D000740 4.7e-06 55.5 106 31.1
Eucgr.F00044 Eucalyptus grandis HOM05D000823 ORTHO05D000088 6.2e-06 55.1 94 35.1
FAN04G2451 Fragaria x ananassa HOM05D000823 ORTHO05D000088 6.2e-06 55.1 89 31.5
Nitab4.5_0003259g0040 Nicotiana tabacum HOM05D000888 ORTHO05D000740 6.2e-06 55.1 100 30.0
Prupe.1G388100 Prunus persica HOM05D000823 ORTHO05D000088 6.2e-06 55.1 88 30.7
TAR381G0348 Trochodendron aralioides HOM05D000823 ORTHO05D000088 6.2e-06 55.1 101 30.7
CAN.G673.7 Capsicum annuum HOM05D000002 ORTHO05D000740 8.1e-06 54.7 141 27.0
CAN.G950.1 Capsicum annuum HOM05D000888 ORTHO05D000740 8.1e-06 54.7 141 30.5
Lj4A48T71 Lonicera japonica HOM05D000823 ORTHO05D000088 8.1e-06 54.7 98 34.7
Nn6g32139 Nelumbo nucifera HOM05D000823 ORTHO05D000088 8.1e-06 54.7 100 32.0
Peaxi162Scf00045g01527 Petunia axillaris HOM05D000888 ORTHO05D000740 8.1e-06 54.7 116 29.3
RcHm_v2.0_Chr7g0224941 Rosa chinensis HOM05D000823 ORTHO05D000088 8.1e-06 54.7 88 38.6
TAR628G1487 Trochodendron aralioides HOM05D000823 ORTHO05D000088 8.1e-06 54.7 124 25.8


User provided reference genes

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