Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0026214 Camellia sinensis var. sinensis HOM05D006228 ORTHO05D007847 4.1e-251 870.9 439 100.0
CSS0000174 Camellia sinensis var. sinensis HOM05D006228 ORTHO05D007847 3.9e-246 854.4 436 98.6
Actinidia13913 Actinidia chinensis HOM05D006228 ORTHO05D007847 6.2e-207 724.2 433 83.6
Dinv34431 Davidia involucrata HOM05D006228 ORTHO05D007847 5.6e-200 701.0 443 80.8
Rhsim09G0171700 Rhododendron simsii HOM05D006228 ORTHO05D007847 1.0e-193 680.2 453 76.8
TAR633G1830 Trochodendron aralioides HOM05D006228 ORTHO05D007847 6.9e-174 614.4 434 70.3
GSVIVG01016380001 Vitis vinifera HOM05D006228 ORTHO05D007847 5.8e-173 611.3 447 69.4
Prupe.2G245100 Prunus persica HOM05D006228 ORTHO05D007847 5.3e-166 588.2 432 67.8
Nitab4.5_0012179g0020 Nicotiana tabacum HOM05D006228 ORTHO05D007847 3.4e-165 585.5 453 66.4
Haze_17175 Corylus avellana HOM05D006228 ORTHO05D007847 1.7e-164 583.2 433 67.4
MD07G1212900 Malus domestica HOM05D006228 ORTHO05D007847 4.3e-160 568.5 431 65.9
vmacro10067 Vaccinium macrocarpon HOM05D006228 ORTHO05D007847 1.3e-159 567.0 476 64.7
Peaxi162Scf00401g00030 Petunia axillaris HOM05D006228 ORTHO05D007847 8.2e-159 564.3 422 68.0
Nn2g13585 Nelumbo nucifera HOM05D006228 ORTHO05D007847 1.1e-158 563.9 428 65.9
Manes.10G018500 Manihot esculenta HOM05D006228 ORTHO05D007847 2.4e-158 562.8 434 65.7
Potri.008G063500 Populus trichocarpa HOM05D006228 ORTHO05D007847 4.0e-158 562.0 444 65.8
Nitab4.5_0000278g0180 Nicotiana tabacum HOM05D006228 ORTHO05D007847 6.9e-158 561.2 418 67.7
CiPaw.01G295100 Carya illinoinensis HOM05D006228 ORTHO05D007847 1.2e-157 560.5 433 65.4
Lj1A949T58 Lonicera japonica HOM05D006228 ORTHO05D007847 1.0e-156 557.4 450 65.1
TWI09G0225 Tripterygium wilfordii HOM05D006228 ORTHO05D007847 1.7e-156 556.6 430 63.7
PGSC0003DMG400007303 Solanum tuberosum HOM05D006228 ORTHO05D007847 2.2e-156 556.2 431 65.7
CAN.G1280.21 Capsicum annuum HOM05D006228 ORTHO05D007847 2.5e-155 552.7 434 65.0
Solyc06g009690.3 Solanum lycopersicum HOM05D006228 ORTHO05D007847 5.5e-155 551.6 441 64.6
Sopen06g004350 Solanum pennellii HOM05D006228 ORTHO05D007847 1.0e-153 547.4 427 65.6
Cfa005508 Carpinus fangiana HOM05D006228 ORTHO05D007847 1.3e-153 547.0 436 63.1
RcHm_v2.0_Chr1g0369221 Rosa chinensis HOM05D006228 ORTHO05D007847 5.1e-153 545.0 433 63.7
CsaV3_5G008840 Cucumis sativus L. HOM05D006228 ORTHO05D007847 2.8e-151 539.3 434 63.8
ClCG11G010510 Citrullus lanatus HOM05D006228 ORTHO05D007847 3.1e-150 535.8 433 63.7
Thecc.10G027500 Theobroma cacao HOM05D006228 ORTHO05D007847 3.1e-150 535.8 434 63.6
MBI14_g08147_MAGBIO Magnolia biondii HOM05D006228 ORTHO05D007847 5.3e-150 535.0 426 63.8
Migut.F00709 Erythranthe guttata HOM05D006228 ORTHO05D007847 5.9e-149 531.6 430 63.3
PSO384G3635 Papaver somniferum HOM05D006228 ORTHO05D007847 8.5e-148 527.7 434 62.4
Aqoxy1G00736 Aquilegia oxysepala HOM05D006228 ORTHO05D007847 1.0e-145 520.8 430 63.5
FAN03G1418 Fragaria x ananassa HOM05D006228 ORTHO05D007847 1.4e-145 520.4 422 62.8
Aqoxy3G00589 Aquilegia oxysepala HOM05D006228 ORTHO05D007847 2.3e-145 519.6 430 63.3
FAN01G0169 Fragaria x ananassa HOM05D006228 ORTHO05D007847 3.9e-145 518.8 433 61.9
FAN06G4757 Fragaria x ananassa HOM05D006228 ORTHO05D007847 3.9e-145 518.8 433 61.9
Cc02_g06990 Coffea canephora HOM05D006228 ORTHO05D007847 1.5e-144 516.9 431 63.8
Sabra08G0046800 Salix brachista HOM05D006228 ORTHO05D007847 1.5e-144 516.9 441 61.7
FvH4_7g23870 Fragaria vesca HOM05D006228 ORTHO05D007847 2.0e-144 516.5 433 61.7
Oeu006660.1 Olea europaea HOM05D006228 ORTHO05D007847 2.5e-144 516.2 433 61.4
Sed0002982 Sechium edule HOM05D006228 ORTHO05D007847 4.3e-144 515.4 435 61.8
Gohir.D06G170400 Gossypium hirsutum HOM05D006228 ORTHO05D007847 1.1e-142 510.8 433 61.0
TPR.G29810 Trifolium pratense HOM05D006228 ORTHO05D007847 1.4e-142 510.4 426 60.6
SGA_v2.0_scaffold2G01060 Striga asiatica HOM05D006228 ORTHO05D007847 2.4e-142 509.6 433 60.3
Gorai.010G199300 Gossypium raimondii HOM05D006228 ORTHO05D007847 4.1e-142 508.8 433 60.7
Gohir.A06G164900 Gossypium hirsutum HOM05D006228 ORTHO05D007847 1.5e-141 506.9 433 60.0
AUR62022833 Chenopodium quinoa HOM05D006228 ORTHO05D007847 2.0e-141 506.5 434 61.1
Ca_17139_v3 Cicer arietinum L. HOM05D006228 ORTHO05D007847 2.6e-141 506.1 430 60.5
Hund13827 Selenicereus undatus HOM05D006228 ORTHO05D007847 3.4e-141 505.8 500 55.4
COL.COLO4_25614 Corchorus olitorius HOM05D006228 ORTHO05D007847 1.7e-140 503.4 434 60.8
Medtr3g070010 Medicago truncatula HOM05D006228 ORTHO05D007847 2.9e-140 502.7 432 59.3
Hma1.2p1_0026F.1_g016930 Hydrangea macrophylla HOM05D006228 ORTHO05D007847 6.5e-140 501.5 310 79.0
THA.LOC104810050 Tarenaya hassleriana HOM05D006228 ORTHO05D007847 6.5e-140 501.5 435 58.4
EL10Ac2g04780 Beta vulgaris HOM05D006228 ORTHO05D007847 1.9e-139 500.0 433 60.3
MELO3C025144.2 Cucumis melo HOM05D006228 ORTHO05D007847 1.9e-139 500.0 444 60.4
Psat5g127520 Pisum sativum HOM05D006228 ORTHO05D007847 4.2e-139 498.8 430 58.6
Lalb_Chr18g0052781 Lupinus albus HOM05D006228 ORTHO05D007847 1.2e-138 497.3 430 60.5
Lj6g0016911 Lotus japonicus HOM05D006228 ORTHO05D007847 8.2e-135 484.6 441 58.0
HanXRQChr09g0246891 Helianthus annuus HOM05D006228 ORTHO05D007847 5.3e-134 481.9 433 59.1
SalBow5G2373 Salvia bowleyana HOM05D006228 ORTHO05D007847 1.5e-133 480.3 404 60.9
Ah.16g103060 Amaranthus hybridus HOM05D006228 ORTHO05D007847 2.0e-133 479.9 434 58.3
Glyma.18G031000 Glycine max HOM05D006228 ORTHO05D007847 4.5e-133 478.8 423 60.0
PGR044G0451 Punica granatum HOM05D006228 ORTHO05D007847 7.7e-133 478.0 433 58.9
Aa31LG5G19710 Aethionema arabicum HOM05D006228 ORTHO05D007847 1.5e-131 473.8 432 55.1
VMungo1383G2528 Vigna mungo HOM05D006228 ORTHO05D007847 4.2e-131 472.2 428 58.2
ECA232G3403 Erigeron canadensis HOM05D006228 ORTHO05D007847 1.2e-130 470.7 429 59.9
AUR62012200 Chenopodium quinoa HOM05D006228 ORTHO05D007847 8.0e-130 468.0 422 57.6
Thhalv10016686m.g Eutrema salsugineum HOM05D006228 ORTHO05D007847 3.9e-129 465.7 428 55.8
Sp4g22220 Schrenkiella parvula HOM05D006228 ORTHO05D007847 3.9e-129 465.7 428 54.0
arahy.Tifrunner.gnm1.ann1.H1F5T1 Arachis hypogaea HOM05D006228 ORTHO05D007847 1.1e-128 464.2 449 55.5
AL4G37490 Arabidopsis lyrata HOM05D006228 ORTHO05D007847 2.6e-128 463.0 429 55.0
Lsat_1_v5_gn_9_63220 Lactuca sativa HOM05D006228 ORTHO05D007847 1.7e-127 460.3 420 61.0
BolC3t15036H Brassica oleracea HOM05D006228 ORTHO05D007847 3.7e-127 459.1 425 54.8
C03p26500 Brassica napus HOM05D006228 ORTHO05D007847 8.2e-127 458.0 428 54.2
DCAR_011778 Daucus carota HOM05D006228 ORTHO05D007847 1.1e-126 457.6 426 56.6
AT2G39910 Arabidopsis thaliana HOM05D006228 ORTHO05D007847 1.8e-126 456.8 429 54.5
A03p22360 Brassica napus HOM05D006228 ORTHO05D007847 2.4e-126 456.4 425 53.4
BraA03t11466Z Brassica rapa HOM05D006228 ORTHO05D007847 2.4e-126 456.4 425 53.6
Duzib106G2031 Durio zibethinus HOM05D006228 ORTHO05D007847 2.4e-126 456.4 434 56.7
Sc11g0007370 Simmondsia chinensis HOM05D006228 ORTHO05D007847 2.0e-125 453.4 373 59.5
BcaC01g05454 Brassica carinata HOM05D006228 ORTHO05D007847 2.6e-125 453.0 428 54.2
FAN10G3493 Fragaria x ananassa HOM05D006228 ORTHO05D007847 2.9e-124 449.5 433 57.3
Carub.0004s2204 Capsella rubella HOM05D006228 ORTHO05D007847 6.5e-124 448.4 423 54.6
Ciclev10031701m.g Citrus clementina HOM05D006228 ORTHO05D007847 6.5e-124 448.4 435 56.8
Phvul.001G239600 Phaseolus vulgaris HOM05D006228 ORTHO05D007847 1.1e-123 447.6 427 57.4
CARHR134830 Cardamine hirsuta HOM05D006228 ORTHO05D007847 1.2e-122 444.1 423 53.9
BcaB01g03579 Brassica carinata HOM05D006228 ORTHO05D007847 6.1e-122 441.8 435 52.2
ATR0580G418 Amborella trichopoda HOM05D006228 ORTHO05D007847 8.0e-122 441.4 415 54.2
SHI03521 Sapria himalayana HOM05D006228 ORTHO05D007847 5.7e-120 435.3 417 53.5
PSO585G0034 Papaver somniferum HOM05D006228 ORTHO05D007847 1.3e-119 434.1 290 71.4
Atru.chr12.264 Acer truncatum HOM05D006228 ORTHO05D007847 2.4e-118 429.9 377 59.7
Eucgr.J00246 Eucalyptus grandis HOM05D006228 ORTHO05D007847 8.0e-114 414.8 442 52.9
Zm00001eb226270 Zea mays HOM05D006228 ORTHO05D007847 3.0e-113 412.9 417 53.2
Os06g0694100 Oryza sativa ssp. japonica HOM05D006228 ORTHO05D007847 1.1e-107 394.4 423 50.1
unitig_747.g21715 Utricularia gibba HOM05D006228 ORTHO05D007847 1.4e-102 377.5 437 49.7
arahy.Tifrunner.gnm1.ann1.PGVU2S Arachis hypogaea HOM05D006228 ORTHO05D007847 1.5e-99 367.5 358 55.0
FAN06G0021 Fragaria x ananassa HOM05D006228 ORTHO05D007847 1.6e-93 347.4 322 57.5
SEGI_03712 Sequoiadendron giganteum HOM05D006228 ORTHO05D007847 6.0e-93 345.5 423 45.2
CDE05G2573 Ceratophyllum demersum HOM05D006228 ORTHO05D007847 5.0e-92 342.4 345 52.8
Cpa.g.sc19.228 Carica papaya HOM05D006228 ORTHO05D007847 1.7e-87 327.4 434 43.3
Actinidia00930 Actinidia chinensis HOM05D006228 ORTHO05D007847 1.6e-66 257.7 145 87.6
HPP92_018568 Vanilla planifolia HOM05D006228 ORTHO05D007847 2.9e-63 246.9 293 48.5
QL08p062537 Quercus lobata HOM05D006228 ORTHO05D007847 7.1e-62 242.3 147 78.9
Sed0008304 Sechium edule HOM05D006228 ORTHO05D007847 1.0e-60 238.4 395 40.3
AagrBONN_evm.TU.Sc2ySwM_344.5121 Anthoceros agrestis HOM05D006228 ORTHO05D007847 1.1e-57 228.4 368 37.0
BcaC02g07378 Brassica carinata HOM05D006228 ORTHO05D007847 1.8e-57 227.6 259 47.1
Mapoly0014s0032 Marchantia polymorpha HOM05D006228 ORTHO05D007847 9.0e-57 225.3 361 36.6
RcHm_v2.0_Chr2g0110551 Rosa chinensis HOM05D006228 ORTHO05D007847 3.4e-56 223.4 141 74.5
MSTRG.8975 Avicennia marina HOM05D006228 ORTHO05D007847 5.1e-52 209.5 223 52.5
SMO273G0042 Selaginella moellendorffii HOM05D006228 ORTHO05D007847 8.7e-52 208.8 300 37.7
BcaB06g29116 Brassica carinata HOM05D006228 ORTHO05D007847 1.3e-50 204.9 430 34.4
Pp3c11_8050 Physcomitrium patens HOM05D006228 ORTHO05D007847 2.1e-50 204.1 294 38.1
HPP92_018569 Vanilla planifolia HOM05D006228 ORTHO05D007847 4.2e-46 189.9 141 60.3
Actinidia25353 Actinidia chinensis HOM05D006228 ORTHO05D007847 9.3e-46 188.7 160 64.4
RcHm_v2.0_Chr1g0339731 Rosa chinensis HOM05D006228 ORTHO05D007847 1.8e-41 174.5 141 63.1
SMO147G0063 Selaginella moellendorffii HOM05D006228 ORTHO05D007847 3.3e-35 153.7 294 32.0
BolC4t28269H Brassica oleracea HOM05D006228 ORTHO05D007847 7.4e-35 152.5 159 48.4
MCO16G020 Micromonas commoda HOM05D006228 ORTHO05D007847 2.6e-19 100.9 278 23.4
Cre01.g048600 Chlamydomonas reinhardtii HOM05D006228 ORTHO05D007847 5.3e-17 93.2 186 28.5
arahy.Tifrunner.gnm1.ann1.DSNI2G Arachis hypogaea HOM05D002669 ORTHO05D003001 9.1e-17 92.4 61 68.9
arahy.Tifrunner.gnm1.ann1.YTZ5F3 Arachis hypogaea HOM05D006228 ORTHO05D007847 5.9e-16 89.7 61 67.2
C04p67680 Brassica napus HOM05D006228 ORTHO05D007847 2.9e-15 87.4 116 43.1
Nitab4.5_0001379g0140 Nicotiana tabacum HOM05D006228 ORTHO05D007847 1.9e-06 58.2 29 82.8


User provided reference genes

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