Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0026201 Camellia sinensis var. sinensis HOM05D005682 ORTHO05D007050 7.5e-71 270.4 136 100.0
Actinidia04079 Actinidia chinensis HOM05D005682 ORTHO05D007050 7.9e-44 180.6 132 68.9
Rhsim09G0074000 Rhododendron simsii HOM05D005682 ORTHO05D007050 4.3e-42 174.9 132 68.9
Dinv11711 Davidia involucrata HOM05D005682 ORTHO05D007050 1.8e-40 169.5 132 64.4
vmacro10900 Vaccinium macrocarpon HOM05D005682 ORTHO05D007050 2.2e-38 162.5 125 66.4
GSVIVG01010197001 Vitis vinifera HOM05D005682 ORTHO05D007050 7.4e-34 147.5 132 57.6
Lj6A721G56 Lonicera japonica HOM05D005682 ORTHO05D007050 4.8e-33 144.8 134 55.2
Haze_11722 Corylus avellana HOM05D005682 ORTHO05D007050 6.2e-33 144.4 133 58.6
TAR622G0093 Trochodendron aralioides HOM05D005682 ORTHO05D007050 8.2e-33 144.1 130 56.9
Nitab4.5_0002392g0020 Nicotiana tabacum HOM05D005682 ORTHO05D007050 1.4e-32 143.3 136 55.9
Solyc02g055470.2 Solanum lycopersicum HOM05D005682 ORTHO05D007050 2.4e-32 142.5 130 56.9
Sopen02g009200 Solanum pennellii HOM05D005682 ORTHO05D007050 2.4e-32 142.5 130 56.9
CiPaw.05G167300 Carya illinoinensis HOM05D005682 ORTHO05D007050 1.2e-31 140.2 130 56.2
Cfa008712 Carpinus fangiana HOM05D005682 ORTHO05D007050 2.0e-31 139.4 131 57.3
Nitab4.5_0000139g0150 Nicotiana tabacum HOM05D005682 ORTHO05D007050 2.2e-30 136.0 130 54.6
Oeu033538.1 Olea europaea HOM05D005682 ORTHO05D007050 1.1e-29 133.7 130 53.8
MSTRG.433 Avicennia marina HOM05D005682 ORTHO05D007050 4.2e-29 131.7 125 55.2
DCAR_002567 Daucus carota HOM05D005682 ORTHO05D007050 1.2e-28 130.2 129 49.6
Aqoxy2G03805 Aquilegia oxysepala HOM05D005682 ORTHO05D007050 6.0e-28 127.9 130 49.2
Nn4g24940 Nelumbo nucifera HOM05D005682 ORTHO05D007050 6.0e-28 127.9 132 51.5
Sp3g17800 Schrenkiella parvula HOM05D005682 ORTHO05D007050 6.0e-28 127.9 136 50.0
ECA246G2025 Erigeron canadensis HOM05D005682 ORTHO05D007050 7.9e-28 127.5 129 51.9
Sabra07G0059000 Salix brachista HOM05D005682 ORTHO05D007050 1.3e-27 126.7 134 48.5
TWI74G0147 Tripterygium wilfordii HOM05D005682 ORTHO05D007050 1.3e-27 126.7 129 49.6
Duzib132G1218 Durio zibethinus HOM05D005682 ORTHO05D007050 1.8e-27 126.3 129 51.2
PSO063G1542 Papaver somniferum HOM05D005682 ORTHO05D007050 3.0e-27 125.6 131 48.1
CANSAT64G0530 Cannabis sativa HOM05D005682 ORTHO05D007050 3.9e-27 125.2 131 50.4
Gohir.A13G059600 Gossypium hirsutum HOM05D005682 ORTHO05D007050 3.9e-27 125.2 128 50.0
arahy.Tifrunner.gnm1.ann1.H4B4B0 Arachis hypogaea HOM05D005682 ORTHO05D007050 5.1e-27 124.8 131 48.1
A05p29790 Brassica napus HOM05D005682 ORTHO05D007050 5.1e-27 124.8 136 49.3
PSO782G3049 Papaver somniferum HOM05D005682 ORTHO05D007050 5.1e-27 124.8 132 48.5
BcaB06g26047 Brassica carinata HOM05D005682 ORTHO05D007050 6.7e-27 124.4 136 50.0
Gohir.D13G062400 Gossypium hirsutum HOM05D005682 ORTHO05D007050 1.1e-26 123.6 128 49.2
BcaC05g28416 Brassica carinata HOM05D005682 ORTHO05D007050 1.5e-26 123.2 140 47.9
BolC5t33225H Brassica oleracea HOM05D005682 ORTHO05D007050 1.5e-26 123.2 140 47.9
Lj3g0015709 Lotus japonicus HOM05D005682 ORTHO05D007050 1.5e-26 123.2 132 46.2
Potri.007G070400 Populus trichocarpa HOM05D005682 ORTHO05D007050 1.5e-26 123.2 131 48.9
AL3G33230 Arabidopsis lyrata HOM05D005682 ORTHO05D007050 1.9e-26 122.9 136 49.3
BcaC05g28407 Brassica carinata HOM05D005682 ORTHO05D007050 2.5e-26 122.5 136 48.5
BraA05t21829Z Brassica rapa HOM05D005682 ORTHO05D007050 2.5e-26 122.5 136 47.8
COL.COLO4_08119 Corchorus olitorius HOM05D005682 ORTHO05D007050 2.5e-26 122.5 129 45.7
Sabra07G0059100 Salix brachista HOM05D005682 ORTHO05D007050 2.5e-26 122.5 134 47.8
Gorai.013G070900 Gossypium raimondii HOM05D005682 ORTHO05D007050 3.3e-26 122.1 128 48.4
THA.LOC104826522 Tarenaya hassleriana HOM05D005682 ORTHO05D007050 3.3e-26 122.1 129 47.3
Duzib052G0545 Durio zibethinus HOM05D005682 ORTHO05D007050 4.3e-26 121.7 130 47.7
Migut.L00859 Erythranthe guttata HOM05D005682 ORTHO05D007050 7.4e-26 120.9 131 48.1
ClCG09G004600 Citrullus lanatus HOM05D005682 ORTHO05D007050 1.6e-25 119.8 133 48.1
MELO3C023602.2 Cucumis melo HOM05D005682 ORTHO05D007050 2.2e-25 119.4 134 47.0
HanXRQChr17g0540811 Helianthus annuus HOM05D005682 ORTHO05D007050 2.2e-25 119.4 130 47.7
Sed0007950 Sechium edule HOM05D005682 ORTHO05D007050 3.7e-25 118.6 133 46.6
Carub.0003s1966 Capsella rubella HOM05D005682 ORTHO05D007050 4.8e-25 118.2 136 48.5
PGR044G2237 Punica granatum HOM05D005682 ORTHO05D007050 4.8e-25 118.2 130 46.9
AT3G19780 Arabidopsis thaliana HOM05D005682 ORTHO05D007050 6.3e-25 117.9 130 50.0
Thhalv10019965m.g Eutrema salsugineum HOM05D005682 ORTHO05D007050 6.3e-25 117.9 129 48.1
MD13G1007100 Malus domestica HOM05D005682 ORTHO05D007050 6.3e-25 117.9 132 48.5
unitig_699.g19973 Utricularia gibba HOM05D005682 ORTHO05D007050 8.2e-25 117.5 146 45.2
ATR0618G435 Amborella trichopoda HOM05D005682 ORTHO05D000625 1.4e-24 116.7 127 45.7
Prupe.1G345800 Prunus persica HOM05D005682 ORTHO05D007050 1.8e-24 116.3 136 47.1
SHI13894 Sapria himalayana HOM05D005682 ORTHO05D007050 1.8e-24 116.3 131 45.0
CARHR095290 Cardamine hirsuta HOM05D005682 ORTHO05D007050 2.4e-24 115.9 129 48.1
Lsat_1_v5_gn_3_33580 Lactuca sativa HOM05D005682 ORTHO05D007050 2.4e-24 115.9 132 47.7
Aa31LG8G6560 Aethionema arabicum HOM05D005682 ORTHO05D007050 3.1e-24 115.5 140 45.0
Phvul.011G031200 Phaseolus vulgaris HOM05D005682 ORTHO05D007050 6.9e-24 114.4 133 44.4
EL10Ac9g20684 Beta vulgaris HOM05D005682 ORTHO05D007050 9.0e-24 114.0 131 45.8
Eucgr.J00855 Eucalyptus grandis HOM05D005682 ORTHO05D007050 1.5e-23 113.2 125 45.6
RcHm_v2.0_Chr4g0446491 Rosa chinensis HOM05D005682 ORTHO05D007050 2.0e-23 112.8 142 45.8
VMungo1127G0377 Vigna mungo HOM05D005682 ORTHO05D007050 2.6e-23 112.5 133 42.9
SalBow2G1379 Salvia bowleyana HOM05D005682 ORTHO05D007050 5.9e-23 111.3 125 46.4
FAN07G1253 Fragaria x ananassa HOM05D005682 ORTHO05D007050 7.6e-23 110.9 142 45.1
FAN17G1521 Fragaria x ananassa HOM05D005682 ORTHO05D007050 1.0e-22 110.5 142 45.1
FvH4_4g36771 Fragaria vesca HOM05D005682 ORTHO05D007050 1.3e-22 110.2 142 43.7
Lalb_Chr01g0001491 Lupinus albus HOM05D005682 ORTHO05D007050 1.3e-22 110.2 135 45.2
Atru.chr11.1182 Acer truncatum HOM05D005682 ORTHO05D007050 6.5e-22 107.8 139 43.9
Ah.14g085910 Amaranthus hybridus HOM05D005682 ORTHO05D007050 8.5e-22 107.5 130 44.6
AUR62018178 Chenopodium quinoa HOM05D005682 ORTHO05D007050 8.5e-22 107.5 133 42.1
Sc06g0007890 Simmondsia chinensis HOM05D005682 ORTHO05D007050 1.1e-21 107.1 126 44.4
CDE04G1313 Ceratophyllum demersum HOM05D005682 ORTHO05D007050 1.6e-20 103.2 126 41.3
Glyma.11G102200 Glycine max HOM05D005682 ORTHO05D007050 1.0e-19 100.5 139 41.0
Zm00001eb221340 Zea mays HOM05D005682 ORTHO05D007050 3.9e-19 98.6 143 38.5
HPP92_008562 Vanilla planifolia HOM05D005682 ORTHO05D007050 5.1e-19 98.2 142 38.0
Peaxi162Scf00363g00073 Petunia axillaris HOM05D005682 ORTHO05D007050 1.5e-18 96.7 98 51.0
CAN.G157.17 Capsicum annuum HOM05D005682 ORTHO05D007050 2.5e-18 95.9 93 52.7
Medtr4g074610 Medicago truncatula HOM05D005682 ORTHO05D007050 4.3e-18 95.1 133 37.6
AUR62038663 Chenopodium quinoa HOM05D005682 ORTHO05D007050 5.7e-18 94.7 121 39.7
Psat7g173480 Pisum sativum HOM05D005682 ORTHO05D007050 5.7e-18 94.7 133 36.1
QL03p043857 Quercus lobata HOM05D005682 ORTHO05D007050 9.1e-16 87.4 153 41.2
Hund13152 Selenicereus undatus HOM05D005682 ORTHO05D007050 2.0e-15 86.3 121 36.4
Cc11_g04390 Coffea canephora HOM05D005682 ORTHO05D007050 1.3e-14 83.6 102 44.1
CsaV3_7G030540 Cucumis sativus L. HOM05D005682 ORTHO05D007050 1.3e-14 83.6 98 48.0
SEGI_38899 Sequoiadendron giganteum HOM05D005682 ORTHO05D007050 3.8e-14 82.0 124 37.9
TPR.G32358 Trifolium pratense HOM05D005682 ORTHO05D007050 1.9e-13 79.7 117 35.0
Ca_03025_v3 Cicer arietinum L. HOM05D005682 ORTHO05D007050 4.2e-13 78.6 126 32.5
Cc11_g00090 Coffea canephora HOM05D005682 ORTHO05D007050 7.2e-13 77.8 98 42.9
FvH4_4g15932 Fragaria vesca HOM05D005682 ORTHO05D007050 1.4e-11 73.6 110 40.9
Aqoxy2G03797 Aquilegia oxysepala HOM05D005682 ORTHO05D007050 2.2e-09 66.2 106 39.6


User provided reference genes

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