Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0026157 Camellia sinensis var. sinensis HOM05D005609 ORTHO05D006871 2.3e-91 339.0 181 100.0
Actinidia05794 Actinidia chinensis HOM05D005609 ORTHO05D006871 3.3e-58 228.8 129 86.8
Dinv44009 Davidia involucrata HOM05D005609 ORTHO05D006871 3.3e-58 228.8 129 84.5
QL04p025874 Quercus lobata HOM05D005609 ORTHO05D006871 9.1e-56 220.7 129 82.2
Oeu021960.2 Olea europaea HOM05D005609 ORTHO05D006871 5.9e-55 218.0 129 79.8
GSVIVG01022468001 Vitis vinifera HOM05D005609 ORTHO05D006871 1.3e-54 216.9 129 82.2
Hma1.2p1_0973F.1_g243010 Hydrangea macrophylla HOM05D005609 ORTHO05D006871 5.0e-54 214.9 129 79.1
Duzib268G1371 Durio zibethinus HOM05D005609 ORTHO05D006871 4.2e-53 211.8 129 77.5
TAR375G0879 Trochodendron aralioides HOM05D005609 ORTHO05D006871 9.4e-53 210.7 129 77.5
CANSAT25G0413 Cannabis sativa HOM05D005609 ORTHO05D006871 1.2e-52 210.3 127 76.4
Nn1g00634 Nelumbo nucifera HOM05D005609 ORTHO05D006871 3.6e-52 208.8 131 73.3
HanXRQChr02g0046691 Helianthus annuus HOM05D005609 ORTHO05D006871 4.7e-52 208.4 127 78.0
Sopen09g033380 Solanum pennellii HOM05D005609 ORTHO05D006871 4.7e-52 208.4 130 76.9
ECA234G4049 Erigeron canadensis HOM05D005609 ORTHO05D006871 6.1e-52 208.0 127 76.4
Nitab4.5_0000204g0040 Nicotiana tabacum HOM05D005609 ORTHO05D006871 6.1e-52 208.0 128 77.3
Nitab4.5_0011341g0010 Nicotiana tabacum HOM05D005609 ORTHO05D006871 6.1e-52 208.0 128 77.3
Hma1.2p1_1440F.1_g283520 Hydrangea macrophylla HOM05D005609 ORTHO05D006871 1.0e-51 207.2 143 72.0
Solyc09g090460.3 Solanum lycopersicum HOM05D005609 ORTHO05D006871 1.4e-51 206.8 130 76.2
CAN.G221.2 Capsicum annuum HOM05D005609 ORTHO05D006871 1.8e-51 206.5 128 77.3
Sc26g0001790 Simmondsia chinensis HOM05D005609 ORTHO05D006871 2.3e-51 206.1 128 76.6
PGSC0003DMG402017205 Solanum tuberosum HOM05D005609 ORTHO05D006871 2.3e-51 206.1 130 76.9
CiPaw.14G015500 Carya illinoinensis HOM05D005609 ORTHO05D006871 4.0e-51 205.3 145 73.1
Rhsim07G0039900 Rhododendron simsii HOM05D005609 ORTHO05D006871 4.0e-51 205.3 108 88.9
PSO063G0967 Papaver somniferum HOM05D005609 ORTHO05D006871 5.2e-51 204.9 130 76.2
Thecc.02G366200 Theobroma cacao HOM05D005609 ORTHO05D006871 5.2e-51 204.9 127 77.2
Cfa022162 Carpinus fangiana HOM05D005609 ORTHO05D006871 1.2e-50 203.8 129 76.0
PSO017G2814 Papaver somniferum HOM05D005609 ORTHO05D006871 1.2e-50 203.8 130 76.2
Gohir.D09G165100 Gossypium hirsutum HOM05D005609 ORTHO05D006871 3.4e-50 202.2 127 72.4
unitig_26.g8865 Utricularia gibba HOM05D005609 ORTHO05D006871 3.4e-50 202.2 128 72.7
Manes.05G059500 Manihot esculenta HOM05D005609 ORTHO05D006871 4.4e-50 201.8 128 76.6
MSTRG.20658 Avicennia marina HOM05D005609 ORTHO05D006871 5.7e-50 201.4 129 75.2
Ciclev10020203m.g Citrus clementina HOM05D005609 ORTHO05D006871 5.7e-50 201.4 128 73.4
SGA_v2.0_scaffold45G17248 Striga asiatica HOM05D005609 ORTHO05D006871 5.7e-50 201.4 127 74.8
Aqoxy3G02536 Aquilegia oxysepala HOM05D005609 ORTHO05D006871 1.3e-49 200.3 129 73.6
Gorai.006G186900 Gossypium raimondii HOM05D005609 ORTHO05D006871 2.2e-49 199.5 121 74.4
Peaxi162Scf00103g01924 Petunia axillaris HOM05D005609 ORTHO05D006871 2.8e-49 199.1 128 74.2
Lsat_1_v5_gn_4_38680 Lactuca sativa HOM05D005609 ORTHO05D006871 3.7e-49 198.7 127 73.2
Lj9A548T58 Lonicera japonica HOM05D005609 ORTHO05D006871 4.8e-49 198.4 108 86.1
Potri.002G134900 Populus trichocarpa HOM05D005609 ORTHO05D006871 8.3e-49 197.6 127 75.6
RcHm_v2.0_Chr1g0343911 Rosa chinensis HOM05D005609 ORTHO05D006871 8.3e-49 197.6 129 72.9
Aqoxy7G01889 Aquilegia oxysepala HOM05D005609 ORTHO05D006871 1.1e-48 197.2 129 73.6
CsaV3_3G010350 Cucumis sativus L. HOM05D005609 ORTHO05D006871 1.1e-48 197.2 130 71.5
TWI23G1015 Tripterygium wilfordii HOM05D005609 ORTHO05D006871 1.8e-48 196.4 127 73.2
ClCG05G002820 Citrullus lanatus HOM05D005609 ORTHO05D006871 3.1e-48 195.7 130 70.8
vmacro13537 Vaccinium macrocarpon HOM05D005609 ORTHO05D006871 4.1e-48 195.3 118 80.5
Atru.chr5.65 Acer truncatum HOM05D005609 ORTHO05D006871 9.1e-48 194.1 130 71.5
AUR62013794 Chenopodium quinoa HOM05D005609 ORTHO05D006871 9.1e-48 194.1 126 75.4
Migut.K00777 Erythranthe guttata HOM05D005609 ORTHO05D006871 9.1e-48 194.1 124 72.6
Atru.chr5.35 Acer truncatum HOM05D005609 ORTHO05D006871 1.2e-47 193.7 130 70.8
Eucgr.E03531 Eucalyptus grandis HOM05D005609 ORTHO05D006871 1.2e-47 193.7 128 72.7
DCAR_029526 Daucus carota HOM05D005609 ORTHO05D006871 1.6e-47 193.4 116 78.4
arahy.Tifrunner.gnm1.ann1.R04L27 Arachis hypogaea HOM05D005609 ORTHO05D006871 2.0e-47 193.0 124 75.8
AUR62023361 Chenopodium quinoa HOM05D005609 ORTHO05D006871 2.0e-47 193.0 126 74.6
MELO3C006259.2 Cucumis melo HOM05D005609 ORTHO05D006871 2.0e-47 193.0 130 70.0
MD07G1087900 Malus domestica HOM05D005609 ORTHO05D006871 2.0e-47 193.0 129 71.3
Haze_02915 Corylus avellana HOM05D005609 ORTHO05D006871 3.5e-47 192.2 108 81.5
Ah.16g103320 Amaranthus hybridus HOM05D005609 ORTHO05D006871 4.5e-47 191.8 128 73.4
Prupe.2G114600 Prunus persica HOM05D005609 ORTHO05D006871 4.5e-47 191.8 127 71.7
Hund17127 Selenicereus undatus HOM05D005609 ORTHO05D006871 4.5e-47 191.8 127 72.4
FAN10G3233 Fragaria x ananassa HOM05D005609 ORTHO05D006871 5.9e-47 191.4 124 74.2
MD02G1225900 Malus domestica HOM05D005609 ORTHO05D006871 5.9e-47 191.4 116 77.6
Sed0001863 Sechium edule HOM05D005609 ORTHO05D006871 5.9e-47 191.4 130 68.5
Phvul.008G139400 Phaseolus vulgaris HOM05D005609 ORTHO05D006871 7.7e-47 191.0 129 72.1
FvH4_7g08680 Fragaria vesca HOM05D005609 ORTHO05D006871 1.7e-46 189.9 124 73.4
FAN06G0131 Fragaria x ananassa HOM05D005609 ORTHO05D006871 1.7e-46 189.9 124 73.4
FAN10G3950 Fragaria x ananassa HOM05D005609 ORTHO05D006871 1.7e-46 189.9 124 73.4
arahy.Tifrunner.gnm1.ann1.HH0QF2 Arachis hypogaea HOM05D005609 ORTHO05D006871 2.3e-46 189.5 124 74.2
COL.COLO4_11253 Corchorus olitorius HOM05D005609 ORTHO05D006871 2.3e-46 189.5 108 80.6
Glyma.08G340000 Glycine max HOM05D005609 ORTHO05D006871 3.8e-46 188.7 129 70.5
Ca_20451_v3 Cicer arietinum L. HOM05D005609 ORTHO05D006871 1.1e-45 187.2 129 70.5
FAN03G3361 Fragaria x ananassa HOM05D005609 ORTHO05D006871 1.5e-45 186.8 124 72.6
THA.LOC104804469 Tarenaya hassleriana HOM05D005609 ORTHO05D006871 1.5e-45 186.8 126 71.4
PGR142G0047 Punica granatum HOM05D005609 ORTHO05D006871 1.9e-45 186.4 127 67.7
TPR.G39143 Trifolium pratense HOM05D005609 ORTHO05D006871 1.9e-45 186.4 129 72.1
Psat3g155960 Pisum sativum HOM05D005609 ORTHO05D006871 4.2e-45 185.3 126 73.0
Lj1g0022406 Lotus japonicus HOM05D005609 ORTHO05D006871 9.5e-45 184.1 123 72.4
Medtr7g450930 Medicago truncatula HOM05D005609 ORTHO05D006871 9.5e-45 184.1 129 70.5
arahy.Tifrunner.gnm1.ann1.HS3HJE Arachis hypogaea HOM05D005609 ORTHO05D006871 2.1e-44 183.0 128 71.1
arahy.Tifrunner.gnm1.ann1.YDE99G Arachis hypogaea HOM05D005609 ORTHO05D006871 2.1e-44 183.0 128 71.1
Lalb_Chr03g0040871 Lupinus albus HOM05D005609 ORTHO05D006871 4.7e-44 181.8 129 70.5
Aa31LG4G1030 Aethionema arabicum HOM05D005609 ORTHO05D006871 8.0e-44 181.0 125 69.6
Cpa.g.sc52.59 Carica papaya HOM05D005609 ORTHO05D006871 8.0e-44 181.0 108 76.9
BolC6t40388H Brassica oleracea HOM05D005609 ORTHO05D006871 1.0e-43 180.6 127 70.9
A07p44900 Brassica napus HOM05D005609 ORTHO05D006871 2.3e-43 179.5 127 70.9
BraA07t31997Z Brassica rapa HOM05D005609 ORTHO05D006871 2.3e-43 179.5 127 70.9
Carub.0002s0078 Capsella rubella HOM05D005609 ORTHO05D006871 2.3e-43 179.5 124 69.4
Thhalv10018566m.g Eutrema salsugineum HOM05D005609 ORTHO05D006871 3.0e-43 179.1 125 69.6
CARHR073710 Cardamine hirsuta HOM05D005609 ORTHO05D006871 4.0e-43 178.7 125 68.0
BcaC08g47546 Brassica carinata HOM05D005609 ORTHO05D006871 5.2e-43 178.3 127 70.9
Sp5g34990 Schrenkiella parvula HOM05D005609 ORTHO05D006871 1.2e-42 177.2 125 68.0
EL10Ac1g00709 Beta vulgaris HOM05D005609 ORTHO05D006871 1.5e-42 176.8 124 68.5
AL2G40620 Arabidopsis lyrata HOM05D005609 ORTHO05D006871 3.4e-42 175.6 125 67.2
AT1G80770 Arabidopsis thaliana HOM05D005609 ORTHO05D006871 4.4e-42 175.3 125 66.4
BcaB02g07248 Brassica carinata HOM05D000537 ORTHO05D006871 2.2e-41 172.9 126 68.3
CDE11G0052 Ceratophyllum demersum HOM05D005609 ORTHO05D006871 3.7e-41 172.2 130 64.6
CDE02G3958 Ceratophyllum demersum HOM05D005609 ORTHO05D006871 8.3e-41 171.0 130 63.8
C06p29500 Brassica napus HOM05D000537 ORTHO05D006871 1.8e-40 169.9 126 67.5
VMungo1080G0777 Vigna mungo HOM05D005609 ORTHO05D006871 1.8e-40 169.9 109 73.4
A07p26850 Brassica napus HOM05D000537 ORTHO05D006871 5.4e-40 168.3 126 66.7
BraA07t30328Z Brassica rapa HOM05D005609 ORTHO05D006871 5.4e-40 168.3 126 66.7
BcaC08g45338 Brassica carinata HOM05D005609 ORTHO05D006871 1.6e-39 166.8 126 66.7
BolC6t38114H Brassica oleracea HOM05D005609 ORTHO05D006871 1.6e-39 166.8 126 66.7
HPP92_008983 Vanilla planifolia HOM05D005609 ORTHO05D006871 2.0e-39 166.4 127 62.2
ATR0665G596 Amborella trichopoda HOM05D005609 ORTHO05D006871 2.3e-38 162.9 129 62.0
Zm00001eb415700 Zea mays HOM05D005609 ORTHO05D006871 7.3e-37 157.9 129 58.1
SEGI_20073 Sequoiadendron giganteum HOM05D005609 ORTHO05D006871 1.4e-35 153.7 127 56.7
Os08g0158900 Oryza sativa ssp. japonica HOM05D005609 ORTHO05D006871 6.4e-33 144.8 125 56.8
Pp3c1_10540 Physcomitrium patens HOM05D005609 ORTHO05D006871 4.3e-29 132.1 126 54.0
SMO174G0003 Selaginella moellendorffii HOM05D005609 ORTHO05D006871 2.8e-28 129.4 115 59.1
Mapoly0062s0042 Marchantia polymorpha HOM05D005609 ORTHO05D006871 4.7e-28 128.6 117 54.7
Dinv43582 Davidia involucrata HOM05D005609 ORTHO05D006871 1.1e-27 127.5 67 88.1
AagrBONN_evm.TU.Sc2ySwM_362.855 Anthoceros agrestis HOM05D005609 ORTHO05D006871 1.1e-24 117.5 108 54.6
SMO174G0269 Selaginella moellendorffii HOM05D005609 ORTHO05D006871 1.4e-19 100.5 63 76.2
CBR_g3918 Chara braunii HOM05D005609 ORTHO05D006871 4.4e-18 95.5 68 61.8
PRCOL_00000081 Prasinoderma coloniale HOM05D005609 ORTHO05D006871 7.3e-13 78.2 127 34.6
Cpa.g.c42586 Carica papaya HOM05D005609 ORTHO05D043520 4.7e-12 75.5 64 57.8
Cpa.g.sc24.96 Carica papaya HOM05D005609 ORTHO05D043520 1.4e-11 73.9 65 55.4
Aqoxy3G02538 Aquilegia oxysepala HOM05D005609 ORTHO05D006871 3.4e-10 69.3 64 54.7
MCO05G391 Micromonas commoda HOM05D005609 ORTHO05D006871 2.4e-08 63.2 60 51.7
CARHR004090 Cardamine hirsuta HOM05D002502 ORTHO05D003592 1.3e-06 57.4 137 31.4
SEGI_13678 Sequoiadendron giganteum HOM05D002502 ORTHO05D003592 1.7e-06 57.0 135 30.4
Gohir.D12G118600 Gossypium hirsutum HOM05D002502 ORTHO05D003592 2.3e-06 56.6 132 31.1
BcaB03g13475 Brassica carinata HOM05D002502 ORTHO05D003592 3.9e-06 55.8 137 29.9
A08p36740 Brassica napus HOM05D002502 ORTHO05D003592 5.1e-06 55.5 137 29.9
BraA08t35576Z Brassica rapa HOM05D002502 ORTHO05D003592 5.1e-06 55.5 137 29.9
AagrBONN_evm.TU.Sc2ySwM_117.2548 Anthoceros agrestis HOM05D002502 ORTHO05D003592 8.7e-06 54.7 75 36.0


User provided reference genes

Program Settings