Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0026146 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D010947 8.8e-145 516.9 260 100.0
CSS0050060 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D010947 1.5e-88 330.1 220 80.5
CSS0038593 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D010947 9.6e-83 310.8 218 76.6
CSS0000995 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D010947 8.4e-79 297.7 218 74.8
CSS0050109 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D000140 1.1e-78 297.4 207 79.2
CSS0006667 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D010947 4.6e-77 292.0 207 78.3
CSS0040161 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D010947 1.0e-68 264.2 193 75.6
CSS0048435 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D010947 3.1e-65 252.7 197 71.1
CSS0017383 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D010947 2.7e-61 239.6 192 71.4
CSS0010215 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D010947 1.4e-57 227.3 192 66.7
CSS0009964 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D010947 1.7e-50 203.8 183 63.9
CSS0015461 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D010947 3.7e-50 202.6 214 57.9
CSS0045906 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D010947 4.4e-43 179.1 192 58.3
Hma1.2p1_0035F.1_g021930 Hydrangea macrophylla HOM05D000034 ORTHO05D000037 1.8e-41 173.7 267 41.6
CSS0030175 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D010947 1.4e-28 131.0 73 90.4
CSS0023971 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D010947 5.2e-28 129.0 74 89.2
CSS0029785 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D010947 2.4e-25 120.2 72 83.3
CSS0040739 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D010947 6.6e-23 112.1 74 78.4
Hma1.2p1_0131F.1_g060610 Hydrangea macrophylla HOM05D000034 ORTHO05D010947 1.7e-18 97.4 166 38.6
Hma1.2p1_0949F.1_g240650 Hydrangea macrophylla HOM05D000034 ORTHO05D010947 2.9e-18 96.7 149 39.6
CSS0048922 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D010947 2.5e-14 83.6 175 36.6
Hma1.2p1_0340F.1_g129910 Hydrangea macrophylla HOM05D000034 ORTHO05D010947 4.0e-12 76.3 67 55.2
Hma1.2p1_1271F.1_g271740 Hydrangea macrophylla HOM05D000034 ORTHO05D010947 4.0e-12 76.3 67 56.7
Hma1.2p1_2873F.1_g329710 Hydrangea macrophylla HOM05D000034 ORTHO05D010947 4.0e-12 76.3 67 56.7
CSS0042933 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D010947 1.3e-10 71.2 109 47.7
CSS0044283 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D010947 1.7e-10 70.9 36 94.4
EL10Ac5g12237 Beta vulgaris HOM05D005504 ORTHO05D002688 3.2e-09 66.6 196 27.6
vmacro21865 Vaccinium macrocarpon HOM05D000665 ORTHO05D002688 1.2e-08 64.7 68 44.1
vmacro23405 Vaccinium macrocarpon HOM05D000665 ORTHO05D002688 1.2e-08 64.7 68 44.1
Rhsim12G0045600 Rhododendron simsii HOM05D000034 ORTHO05D002688 1.6e-08 64.3 264 24.6
vmacro05860 Vaccinium macrocarpon HOM05D000034 ORTHO05D002688 1.6e-08 64.3 183 30.1
Hund01843 Selenicereus undatus HOM05D012237 ORTHO05D010947 2.7e-08 63.5 97 43.3
CSS0010294 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D002688 1.0e-07 61.6 236 25.0
ECA232G2669 Erigeron canadensis HOM05D005504 ORTHO05D002688 2.3e-07 60.5 195 27.2
arahy.Tifrunner.gnm1.ann1.8AJD73 Arachis hypogaea HOM05D000034 ORTHO05D000037 3.9e-07 59.7 81 43.2
Rhsim01G0122200 Rhododendron simsii HOM05D000367 ORTHO05D002688 3.9e-07 59.7 185 25.9
Hund19303 Selenicereus undatus HOM05D000665 ORTHO05D000140 5.0e-07 59.3 92 42.4
Hund24317 Selenicereus undatus HOM05D003487 ORTHO05D000140 5.0e-07 59.3 70 42.9
Ah.01g010920 Amaranthus hybridus HOM05D005504 ORTHO05D002688 6.6e-07 58.9 219 26.0
EL10Ac6g13234 Beta vulgaris HOM05D000034 ORTHO05D002688 8.6e-07 58.5 241 25.7
Ah.10g026380 Amaranthus hybridus HOM05D005504 ORTHO05D002688 1.1e-06 58.2 219 25.6
CSS0041263 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D002688 3.3e-06 56.6 228 22.4
CiPaw.14G011200 Carya illinoinensis HOM05D007780 ORTHO05D000140 3.3e-06 56.6 99 37.4
Lsat_1_v5_gn_5_155201 Lactuca sativa HOM05D000665 ORTHO05D000140 3.3e-06 56.6 100 34.0
EL10Ac7g17364 Beta vulgaris HOM05D005504 ORTHO05D002688 4.3e-06 56.2 234 25.2
Manes.11G009500 Manihot esculenta HOM05D007780 ORTHO05D000140 4.3e-06 56.2 99 38.4
BcaC03g16144 Brassica carinata HOM05D007780 ORTHO05D000140 5.6e-06 55.8 76 39.5
C02p39310 Brassica napus HOM05D007780 ORTHO05D000140 5.6e-06 55.8 76 39.5
BolC2t09942H Brassica oleracea HOM05D007780 ORTHO05D000140 5.6e-06 55.8 76 39.5
Glyma.06G311800 Glycine max HOM05D007780 ORTHO05D000140 5.6e-06 55.8 100 39.0
Sp6g02460 Schrenkiella parvula HOM05D007780 ORTHO05D000140 5.6e-06 55.8 76 42.1
THA.LOC104814049 Tarenaya hassleriana HOM05D007780 ORTHO05D000140 7.3e-06 55.5 97 37.1
CARHR250840 Cardamine hirsuta HOM05D007780 ORTHO05D000140 9.5e-06 55.1 76 40.8
Sc05g0005210 Simmondsia chinensis HOM05D000034 ORTHO05D010947 9.5e-06 55.1 77 39.0


User provided reference genes

Program Settings