Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0026121 Camellia sinensis var. sinensis HOM05D007410 ORTHO05D009500 2.3e-85 321.2 827 100.0
Dinv39608 Davidia involucrata HOM05D007410 ORTHO05D009500 6.0e-46 190.3 177 79.1
Dinv34010 Davidia involucrata HOM05D007410 ORTHO05D009500 1.3e-40 172.6 152 67.8
Hma1.2p1_0084F.1_g043130 Hydrangea macrophylla HOM05D007410 ORTHO05D009500 1.4e-39 169.1 176 77.3
FAN05G1927 Fragaria x ananassa HOM05D007410 ORTHO05D009500 2.2e-35 155.2 177 73.4
FAN02G1401 Fragaria x ananassa HOM05D007410 ORTHO05D009500 6.3e-35 153.7 177 72.9
TWI60G0552 Tripterygium wilfordii HOM05D007410 ORTHO05D009500 2.0e-33 148.7 177 68.9
Nitab4.5_0005621g0120 Nicotiana tabacum HOM05D007410 ORTHO05D009500 2.6e-33 148.3 173 74.0
CAN.G575.91 Capsicum annuum HOM05D007410 ORTHO05D009500 3.4e-33 147.9 180 71.1
RcHm_v2.0_Chr3g0471971 Rosa chinensis HOM05D007410 ORTHO05D009500 5.9e-33 147.1 177 71.8
PGSC0003DMG400004719 Solanum tuberosum HOM05D007410 ORTHO05D009500 5.9e-33 147.1 173 68.8
FAN09G0790 Fragaria x ananassa HOM05D007410 ORTHO05D009500 7.6e-33 146.7 177 71.2
FvH4_6g17750 Fragaria vesca HOM05D007410 ORTHO05D009500 1.3e-32 146.0 177 70.6
FAN14G2442 Fragaria x ananassa HOM05D007410 ORTHO05D009500 1.3e-32 146.0 177 70.6
Potri.010G249800 Populus trichocarpa HOM05D007410 ORTHO05D009500 5.0e-32 144.1 172 75.0
Nitab4.5_0026813g0010 Nicotiana tabacum HOM05D007410 ORTHO05D009500 1.1e-31 142.9 173 71.7
TAR365G0607 Trochodendron aralioides HOM05D007410 ORTHO05D009500 5.5e-31 140.6 151 55.6
Sabra10G0194300 Salix brachista HOM05D001909 ORTHO05D007079 1.8e-29 135.6 173 72.3
Duzib093G0520 Durio zibethinus HOM05D007410 ORTHO05D009500 6.7e-29 133.7 174 71.8
MD14G1014400 Malus domestica HOM05D007410 ORTHO05D009500 7.4e-28 130.2 151 54.3
QL02p025248 Quercus lobata HOM05D007410 ORTHO05D009500 1.7e-27 129.0 151 54.3
Haze_19526 Corylus avellana HOM05D007410 ORTHO05D009500 8.2e-27 126.7 151 53.6
MD12G1016300 Malus domestica HOM05D007410 ORTHO05D009500 6.9e-26 123.6 130 55.4
Rhsim03G0082200 Rhododendron simsii HOM05D007410 ORTHO05D009500 9.1e-26 123.2 156 55.8
Gohir.A01G210000 Gossypium hirsutum HOM05D007410 ORTHO05D009500 1.2e-25 122.9 172 68.0
Prupe.7G119000 Prunus persica HOM05D007410 ORTHO05D009500 2.6e-25 121.7 153 52.9
Gohir.D01G198900 Gossypium hirsutum HOM05D007410 ORTHO05D009500 4.5e-25 120.9 172 67.4
Gorai.002G243300 Gossypium raimondii HOM05D007410 ORTHO05D009500 4.5e-25 120.9 172 67.4
Cfa016527 Carpinus fangiana HOM05D007410 ORTHO05D009500 7.7e-25 120.2 150 52.0
AT5G12100 Arabidopsis thaliana HOM05D007410 ORTHO05D009500 1.0e-24 119.8 178 37.1
Glyma.03G190300 Glycine max HOM05D007410 ORTHO05D009500 2.9e-24 118.2 163 68.7
Solyc12g099840.1 Solanum lycopersicum HOM05D007410 ORTHO05D009500 3.8e-24 117.9 148 72.3
Manes.09G058000 Manihot esculenta HOM05D007410 ORTHO05D009500 1.1e-23 116.3 175 65.7
CANSAT80G0494 Cannabis sativa HOM05D007410 ORTHO05D009500 1.4e-23 115.9 178 65.7
CiPaw.09G007900 Carya illinoinensis HOM05D007410 ORTHO05D009500 1.9e-23 115.5 145 51.7
Glyma.19G190733 Glycine max HOM05D007410 ORTHO05D009500 2.5e-23 115.2 163 67.5
Lalb_Chr01g0018371 Lupinus albus HOM05D007410 ORTHO05D009500 3.2e-23 114.8 163 67.5
Cc06_g05130 Coffea canephora HOM05D007410 ORTHO05D009500 4.2e-23 114.4 173 67.1
VMungo1383G0444 Vigna mungo HOM05D007410 ORTHO05D009500 4.7e-22 110.9 163 65.0
AUR62013683 Chenopodium quinoa HOM05D007410 ORTHO05D009500 7.9e-22 110.2 175 64.6
Ca_08961_v3 Cicer arietinum L. HOM05D007410 ORTHO05D009500 1.4e-21 109.4 157 70.7
Psat2g007640 Pisum sativum HOM05D007410 ORTHO05D009500 3.0e-21 108.2 157 70.7
Phvul.001G185900 Phaseolus vulgaris HOM05D007410 ORTHO05D009500 3.9e-21 107.8 157 69.4
Medtr7g103600 Medicago truncatula HOM05D007410 ORTHO05D009500 6.7e-21 107.1 157 68.8
Sopen12g034470 Solanum pennellii HOM05D007410 ORTHO05D009500 8.8e-21 106.7 148 71.6
Sed0018174 Sechium edule HOM05D007410 ORTHO05D009500 2.0e-20 105.5 172 63.4
COL.COLO4_29826 Corchorus olitorius HOM05D007410 ORTHO05D009500 3.3e-20 104.8 73 63.0
Aa31LG3G15130 Aethionema arabicum HOM05D007410 ORTHO05D009500 9.7e-20 103.2 178 52.8
Oeu023854.1 Olea europaea HOM05D007410 ORTHO05D009500 2.2e-19 102.1 178 62.4
Sc18g0006010 Simmondsia chinensis HOM05D007410 ORTHO05D009500 2.8e-19 101.7 169 64.5
FAN09G1720 Fragaria x ananassa HOM05D007410 ORTHO05D009500 8.2e-19 100.1 86 64.0
Atru.chr12.1030 Acer truncatum HOM05D007410 ORTHO05D009500 4.1e-18 97.8 91 63.7
Eucgr.A01557 Eucalyptus grandis HOM05D007410 ORTHO05D009500 4.1e-18 97.8 154 47.4
Peaxi162Scf00802g00013 Petunia axillaris HOM05D007410 ORTHO05D009500 4.1e-18 97.8 175 61.7
PGR004G1775 Punica granatum HOM05D007410 ORTHO05D009500 9.1e-18 96.7 94 58.5
DCAR_020784 Daucus carota HOM05D007410 ORTHO05D009500 2.0e-17 95.5 91 53.8
Lj1g0017625 Lotus japonicus HOM05D007410 ORTHO05D009500 2.6e-17 95.1 163 65.0
Ciclev10033972m.g Citrus clementina HOM05D007410 ORTHO05D009500 3.4e-17 94.7 128 51.6
SHI27720 Sapria himalayana HOM05D007410 ORTHO05D009500 5.9e-17 94.0 100 56.0
TPR.G28359 Trifolium pratense HOM05D007410 ORTHO05D009500 1.3e-16 92.8 157 66.9
DCAR_013956 Daucus carota HOM05D007410 ORTHO05D009500 1.7e-16 92.4 106 46.2
Lj9E304T4 Lonicera japonica HOM05D007410 ORTHO05D009500 2.9e-16 91.7 148 43.2
Sp6g31520 Schrenkiella parvula HOM05D007410 ORTHO05D009500 3.8e-16 91.3 135 46.7
Cpa.g.sc117.70 Carica papaya HOM05D007410 ORTHO05D009500 5.0e-16 90.9 176 60.2
Oeu058028.1 Olea europaea HOM05D007410 ORTHO05D009500 8.5e-16 90.1 178 59.0
Migut.J00989 Erythranthe guttata HOM05D007410 ORTHO05D009500 5.5e-15 87.4 172 61.6
HanXRQChr17g0535541 Helianthus annuus HOM05D007410 ORTHO05D009500 5.5e-15 87.4 146 33.6
HanXRQChr02g0058171 Helianthus annuus HOM05D007410 ORTHO05D009500 1.2e-14 86.3 144 62.5
BolC9t59308H Brassica oleracea HOM05D007410 ORTHO05D009500 2.1e-14 85.5 139 46.8
Carub.0006s1061 Capsella rubella HOM05D007410 ORTHO05D009500 2.7e-14 85.1 141 44.0
Migut.A01169 Erythranthe guttata HOM05D007410 ORTHO05D009500 8.0e-14 83.6 172 59.3
BcaNung06328 Brassica carinata HOM05D007410 ORTHO05D009500 3.9e-13 81.3 157 43.9
BraA10t44635Z Brassica rapa HOM05D007410 ORTHO05D009500 5.2e-13 80.9 154 45.5
CARHR201020 Cardamine hirsuta HOM05D007410 ORTHO05D009500 8.8e-13 80.1 140 42.9
Nn8g39918 Nelumbo nucifera HOM05D007410 ORTHO05D009500 1.1e-12 79.7 145 43.4
A10p25700 Brassica napus HOM05D007410 ORTHO05D009500 1.5e-12 79.3 154 44.2
ClCG05G007520 Citrullus lanatus HOM05D007410 ORTHO05D009500 1.5e-12 79.3 159 40.3
EL10Ac1g00861 Beta vulgaris HOM05D007410 ORTHO05D009500 5.7e-12 77.4 139 42.4
Aqoxy1G00955 Aquilegia oxysepala HOM05D007410 ORTHO05D009500 7.4e-12 77.0 152 39.5
Atru.BG.129.p Acer truncatum HOM05D007410 ORTHO05D009500 2.8e-11 75.1 81 54.3
AUR62004183 Chenopodium quinoa HOM05D007410 ORTHO05D009500 2.8e-11 75.1 152 40.8
HanXRQChr17g0534281 Helianthus annuus HOM05D007410 ORTHO05D009500 3.7e-11 74.7 92 46.7
SGA_v2.0_scaffold40G15416 Striga asiatica HOM05D007410 ORTHO05D009500 8.2e-11 73.6 167 57.5
CsaV3_3G016400 Cucumis sativus L. HOM05D007410 ORTHO05D009500 1.1e-10 73.2 118 44.1
Thecc.05G080100 Theobroma cacao HOM05D007410 ORTHO05D009500 1.1e-10 73.2 52 65.4
Lj9P304T66 Lonicera japonica HOM05D007410 ORTHO05D009500 1.8e-10 72.4 171 57.9
Nitab4.5_0001290g0100 Nicotiana tabacum HOM05D007410 ORTHO05D009500 5.3e-10 70.9 127 44.1
Actinidia11327 Actinidia chinensis HOM05D007410 ORTHO05D019476 7.0e-10 70.5 49 75.5
C09p64770 Brassica napus HOM05D007410 ORTHO05D009500 2.0e-09 68.9 152 40.8
MELO3C006839.2 Cucumis melo HOM05D007410 ORTHO05D009500 2.0e-09 68.9 153 39.2
Ah.05g174660 Amaranthus hybridus HOM05D007410 ORTHO05D009500 4.5e-09 67.8 163 56.4
ECA233G1087 Erigeron canadensis HOM05D001398 ORTHO05D001467 1.5e-07 62.8 51 51.0
ATR0820G273 Amborella trichopoda HOM05D007410 ORTHO05D009500 4.2e-07 61.2 55 41.8
Glyma.19G190667 Glycine max HOM05D007410 ORTHO05D009500 7.2e-07 60.5 91 44.0
Potri.008G009201 Populus trichocarpa HOM05D007410 ORTHO05D009500 9.4e-07 60.1 56 55.4


User provided reference genes

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