Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0026100 Camellia sinensis var. sinensis HOM05D006473 ORTHO05D008108 4.0e-105 384.8 197 100.0
CSS0046570 Camellia sinensis var. sinensis HOM05D006473 ORTHO05D008108 4.0e-105 384.8 197 100.0
Actinidia12507 Actinidia chinensis HOM05D006473 ORTHO05D008108 5.7e-27 125.2 193 46.6
Peaxi162Scf00322g00416 Petunia axillaris HOM05D006473 ORTHO05D008108 3.4e-24 115.9 182 46.7
Nitab4.5_0002292g0030 Nicotiana tabacum HOM05D006473 ORTHO05D008108 1.4e-22 110.5 178 43.3
Peaxi162Scf00393g01011 Petunia axillaris HOM05D006473 ORTHO05D008108 4.2e-22 109.0 178 41.6
CAN.G529.20 Capsicum annuum HOM05D006473 ORTHO05D008108 7.2e-22 108.2 188 41.5
Solyc07g043070.3 Solanum lycopersicum HOM05D006473 ORTHO05D008108 9.4e-22 107.8 179 41.3
Sopen07g022630 Solanum pennellii HOM05D006473 ORTHO05D008108 1.6e-21 107.1 179 41.3
Sed0014549 Sechium edule HOM05D006473 ORTHO05D008108 3.6e-21 105.9 172 41.3
vmacro08765 Vaccinium macrocarpon HOM05D006473 ORTHO05D008108 4.7e-21 105.5 177 45.2
Nitab4.5_0011512g0010 Nicotiana tabacum HOM05D006473 ORTHO05D008108 7.9e-21 104.8 178 41.6
PGSC0003DMG400013558 Solanum tuberosum HOM05D006473 ORTHO05D008108 1.0e-20 104.4 194 38.7
Migut.H01260 Erythranthe guttata HOM05D006473 ORTHO05D008108 1.8e-20 103.6 182 40.7
PSO675G8005 Papaver somniferum HOM05D006473 ORTHO05D008108 1.5e-19 100.5 171 42.1
ClCG11G016910 Citrullus lanatus HOM05D006473 ORTHO05D008108 3.3e-19 99.4 170 41.2
Cc00_g04870 Coffea canephora HOM05D006473 ORTHO05D008108 4.4e-19 99.0 159 42.8
TAR626G1390 Trochodendron aralioides HOM05D006473 ORTHO05D008108 7.4e-19 98.2 169 43.2
CiPaw.04G072200 Carya illinoinensis HOM05D006473 ORTHO05D008108 9.7e-19 97.8 176 42.6
Haze_13544 Corylus avellana HOM05D006473 ORTHO05D008108 1.3e-18 97.4 178 42.1
Actinidia32074 Actinidia chinensis HOM05D006473 ORTHO05D008108 1.7e-18 97.1 196 41.8
CiPaw.03G109100 Carya illinoinensis HOM05D006473 ORTHO05D008108 1.7e-18 97.1 174 43.1
TAR626G1015 Trochodendron aralioides HOM05D006473 ORTHO05D008108 1.7e-18 97.1 169 43.2
Lsat_1_v5_gn_1_29560 Lactuca sativa HOM05D006473 ORTHO05D008108 1.1e-17 94.4 189 40.2
Sed0027280 Sechium edule HOM05D006473 ORTHO05D008108 1.8e-17 93.6 173 41.6
Cfa023365 Carpinus fangiana HOM05D006473 ORTHO05D008108 3.1e-17 92.8 178 41.6
DCAR_029496 Daucus carota HOM05D006473 ORTHO05D008108 3.1e-17 92.8 184 41.3
Psat5g106240 Pisum sativum HOM05D006473 ORTHO05D008108 3.1e-17 92.8 182 38.5
CsaV3_4G032520 Cucumis sativus L. HOM05D006473 ORTHO05D008108 4.1e-17 92.4 171 40.9
Rhsim12G0015400 Rhododendron simsii HOM05D006473 ORTHO05D008108 7.0e-17 91.7 173 43.4
MELO3C026363.2 Cucumis melo HOM05D006473 ORTHO05D008108 9.1e-17 91.3 177 39.0
MD09G1143500 Malus domestica HOM05D006473 ORTHO05D008108 1.2e-16 90.9 167 41.9
RcHm_v2.0_Chr2g0153221 Rosa chinensis HOM05D006473 ORTHO05D008108 1.2e-16 90.9 175 41.7
FAN09G0937 Fragaria x ananassa HOM05D006473 ORTHO05D008108 1.5e-16 90.5 179 38.5
FAN14G2613 Fragaria x ananassa HOM05D006473 ORTHO05D008108 1.5e-16 90.5 179 38.5
Aqoxy5G02466 Aquilegia oxysepala HOM05D006473 ORTHO05D008108 3.5e-16 89.4 167 38.9
Nitab4.5_0000170g0320 Nicotiana tabacum HOM05D006473 ORTHO05D008108 4.5e-16 89.0 148 41.2
Glyma.13G004200 Glycine max HOM05D006473 ORTHO05D008108 5.9e-16 88.6 179 41.9
Prupe.3G184300 Prunus persica HOM05D006473 ORTHO05D008108 1.3e-15 87.4 169 40.8
MD17G1129800 Malus domestica HOM05D006473 ORTHO05D008108 1.7e-15 87.0 172 41.9
FAN05G1961 Fragaria x ananassa HOM05D006473 ORTHO05D008108 2.2e-15 86.7 180 39.4
Nn7g38339 Nelumbo nucifera HOM05D006473 ORTHO05D008108 2.2e-15 86.7 174 37.4
Duzib138G0874 Durio zibethinus HOM05D006473 ORTHO05D008108 2.9e-15 86.3 175 41.7
Lj6g0005292 Lotus japonicus HOM05D006473 ORTHO05D008108 3.8e-15 85.9 177 40.1
FvH4_6g39300 Fragaria vesca HOM05D006473 ORTHO05D008108 5.0e-15 85.5 175 40.6
Medtr3g082070 Medicago truncatula HOM05D006473 ORTHO05D008108 6.5e-15 85.1 175 38.9
Potri.006G008000 Populus trichocarpa HOM05D006473 ORTHO05D008108 1.1e-14 84.3 180 40.6
PGR031G0759 Punica granatum HOM05D006473 ORTHO05D008108 1.5e-14 84.0 175 40.0
COL.COLO4_19989 Corchorus olitorius HOM05D006473 ORTHO05D008108 1.9e-14 83.6 177 38.4
Glyma.20G063000 Glycine max HOM05D006473 ORTHO05D008108 1.9e-14 83.6 178 39.3
Gohir.D11G162300 Gossypium hirsutum HOM05D006473 ORTHO05D008108 1.9e-14 83.6 176 39.8
Phvul.007G120134 Phaseolus vulgaris HOM05D006473 ORTHO05D008108 1.9e-14 83.6 177 41.2
Thecc.01G174700 Theobroma cacao HOM05D006473 ORTHO05D008108 1.9e-14 83.6 182 37.4
TPR.G17559 Trifolium pratense HOM05D006473 ORTHO05D008108 1.9e-14 83.6 175 37.7
Gorai.007G172600 Gossypium raimondii HOM05D006473 ORTHO05D008108 2.5e-14 83.2 176 39.8
Lalb_Chr17g0337141 Lupinus albus HOM05D006473 ORTHO05D008108 2.5e-14 83.2 173 40.5
Sabra06G0006200 Salix brachista HOM05D006473 ORTHO05D008108 5.5e-14 82.0 180 39.4
Gohir.A11G155300 Gossypium hirsutum HOM05D006473 ORTHO05D008108 7.2e-14 81.6 176 39.2
VMungo0540G0033 Vigna mungo HOM05D006473 ORTHO05D008108 9.4e-14 81.3 170 42.9
CANSAT64G1482 Cannabis sativa HOM05D006473 ORTHO05D008108 1.6e-13 80.5 175 39.4
TWI34G1686 Tripterygium wilfordii HOM05D006473 ORTHO05D008108 1.6e-13 80.5 168 40.5
EL10Ac6g15336 Beta vulgaris HOM05D006473 ORTHO05D008108 3.6e-13 79.3 170 37.1
COL.COLO4_18222 Corchorus olitorius HOM05D006473 ORTHO05D008108 4.7e-13 79.0 177 37.9
Sc07g0001930 Simmondsia chinensis HOM05D006473 ORTHO05D008108 8.0e-13 78.2 174 35.6
ECA247G3587 Erigeron canadensis HOM05D006473 ORTHO05D008108 3.0e-12 76.3 187 38.5
Ciclev10012907m.g Citrus clementina HOM05D006473 ORTHO05D008108 1.1e-11 74.3 167 38.3
SGA_v2.0_scaffold49G18372 Striga asiatica HOM05D006473 ORTHO05D008108 1.5e-11 73.9 164 34.8
Atru.chr8.1011 Acer truncatum HOM05D006473 ORTHO05D008108 2.6e-11 73.2 164 37.2
Cpa.g.sc8.265 Carica papaya HOM05D006473 ORTHO05D008108 2.6e-11 73.2 173 38.2
arahy.Tifrunner.gnm1.ann1.ITU10B Arachis hypogaea HOM05D006473 ORTHO05D008108 3.3e-11 72.8 175 36.0
Hund23023 Selenicereus undatus HOM05D006473 ORTHO05D008108 3.3e-11 72.8 170 35.9
QL10p019398 Quercus lobata HOM05D006473 ORTHO05D008108 4.4e-11 72.4 180 36.1
QL07p025679 Quercus lobata HOM05D006473 ORTHO05D008108 5.7e-11 72.0 180 38.9
CDE05G3197 Ceratophyllum demersum HOM05D006473 ORTHO05D008108 1.3e-10 70.9 182 30.8
Manes.08G068100 Manihot esculenta HOM05D006473 ORTHO05D008108 1.3e-10 70.9 173 36.4
Haze_13545 Corylus avellana HOM05D006473 ORTHO05D008108 1.7e-10 70.5 131 39.7
Thhalv10027487m.g Eutrema salsugineum HOM05D006473 ORTHO05D008108 1.7e-10 70.5 44 70.5
arahy.Tifrunner.gnm1.ann1.UN21ID Arachis hypogaea HOM05D006473 ORTHO05D008108 2.8e-10 69.7 175 34.9
Ca_16320_v3 Cicer arietinum L. HOM05D006473 ORTHO05D008108 4.8e-10 68.9 168 37.5
Oeu027256.1 Olea europaea HOM05D006473 ORTHO05D008108 6.3e-10 68.6 142 37.3
HPP92_016064 Vanilla planifolia HOM05D006473 ORTHO05D008108 6.3e-10 68.6 46 71.7
QL07p026979 Quercus lobata HOM05D006473 ORTHO05D008108 8.2e-10 68.2 108 45.4
Carub.0007s2685 Capsella rubella HOM05D006473 ORTHO05D008108 1.1e-09 67.8 51 60.8
GSVIVG01015888001 Vitis vinifera HOM05D006473 ORTHO05D008108 1.1e-09 67.8 166 41.6
AT4G15140 Arabidopsis thaliana HOM05D006473 ORTHO05D008108 1.4e-09 67.4 44 68.2
QL07p026949 Quercus lobata HOM05D006473 ORTHO05D008108 1.4e-09 67.4 185 37.3
QL09p045725 Quercus lobata HOM05D006473 ORTHO05D008108 1.4e-09 67.4 110 43.6
Eucgr.A00949 Eucalyptus grandis HOM05D006473 ORTHO05D008108 2.4e-09 66.6 176 36.4
AL7G40560 Arabidopsis lyrata HOM05D006473 ORTHO05D008108 3.1e-09 66.2 44 65.9
CDE11G0296 Ceratophyllum demersum HOM05D006473 ORTHO05D008108 4.1e-09 65.9 39 74.4
MBI02_g01129_MAGBIO Magnolia biondii HOM05D006464 ORTHO05D007923 4.1e-09 65.9 152 34.2
HanXRQChr02g0035171 Helianthus annuus HOM05D006473 ORTHO05D008108 9.1e-09 64.7 190 36.3
Hund04387 Selenicereus undatus HOM05D006473 ORTHO05D008108 9.1e-09 64.7 172 31.4
THA.LOC104808506 Tarenaya hassleriana HOM05D006473 ORTHO05D008108 9.1e-09 64.7 170 34.7
unitig_62.g23243 Utricularia gibba HOM05D006473 ORTHO05D008108 1.2e-08 64.3 56 62.5
Sabra16G0000300 Salix brachista HOM05D006473 ORTHO05D008108 1.6e-08 63.9 184 33.2
Zm00001eb078060 Zea mays HOM05D006473 ORTHO05D008108 1.6e-08 63.9 38 81.6
Aa31LG9G2250 Aethionema arabicum HOM05D006473 ORTHO05D008108 2.6e-08 63.2 41 63.4
CARHR221880 Cardamine hirsuta HOM05D006473 ORTHO05D008108 2.6e-08 63.2 170 32.9
QL04p064817 Quercus lobata HOM05D006473 ORTHO05D008108 2.6e-08 63.2 181 35.9
Os04g0504200 Oryza sativa ssp. japonica HOM05D006473 ORTHO05D008108 5.9e-08 62.0 38 78.9
BraA05t20604Z Brassica rapa HOM05D006473 ORTHO05D008108 1.0e-07 61.2 169 33.1
QL07p027003 Quercus lobata HOM05D006473 ORTHO05D008108 1.0e-07 61.2 185 36.2
BcaB02g07838 Brassica carinata HOM05D006473 ORTHO05D008108 1.3e-07 60.8 169 32.0
Cpa.g.sc32.52 Carica papaya HOM05D006473 ORTHO05D008108 1.3e-07 60.8 170 37.1
Sp7g13370 Schrenkiella parvula HOM05D006473 ORTHO05D008108 2.2e-07 60.1 170 32.4
A05p16970 Brassica napus HOM05D006473 ORTHO05D008108 6.5e-07 58.5 169 33.1
BcaC07g37876 Brassica carinata HOM05D006473 ORTHO05D008108 1.5e-06 57.4 168 33.3
BolC8t48269H Brassica oleracea HOM05D006473 ORTHO05D008108 1.5e-06 57.4 168 33.3
BcaC08g44251 Brassica carinata HOM05D006473 ORTHO05D008108 1.9e-06 57.0 169 32.0
C06p16570 Brassica napus HOM05D006473 ORTHO05D008108 1.9e-06 57.0 169 32.0
BolC6t36859H Brassica oleracea HOM05D006473 ORTHO05D008108 1.9e-06 57.0 169 32.0


User provided reference genes

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