Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0026068 Camellia sinensis var. sinensis HOM05D025609 ORTHO05D110370 2.8e-182 641.7 305 100.0
CSS0003532 Camellia sinensis var. sinensis HOM05D025609 ORTHO05D112093 1.3e-168 596.3 313 93.3
CSS0002837 Camellia sinensis var. sinensis HOM05D000367 ORTHO05D002159 1.0e-27 128.3 122 55.7
CSS0037208 Camellia sinensis var. sinensis HOM05D000367 ORTHO05D002159 1.8e-27 127.5 118 57.6
CSS0041953 Camellia sinensis var. sinensis HOM05D000367 ORTHO05D002159 4.4e-26 122.9 122 54.1
Actinidia20687 Actinidia chinensis HOM05D000367 ORTHO05D002159 3.5e-23 113.2 122 50.8
Actinidia28305 Actinidia chinensis HOM05D000367 ORTHO05D002159 5.9e-23 112.5 116 52.6
vmacro01203 Vaccinium macrocarpon HOM05D000367 ORTHO05D002159 8.2e-17 92.0 130 47.7
vmacro21169 Vaccinium macrocarpon HOM05D000367 ORTHO05D002159 1.1e-16 91.7 125 44.8
Dinv43905 Davidia involucrata HOM05D000367 ORTHO05D002159 1.4e-16 91.3 121 47.9
Hma1.2p1_1011F.1_g247465 Hydrangea macrophylla HOM05D000367 ORTHO05D002159 2.4e-16 90.5 116 46.6
CSS0050221 Camellia sinensis var. sinensis HOM05D000367 ORTHO05D002159 3.5e-15 86.7 118 44.9
MSTRG.20608 Avicennia marina HOM05D000367 ORTHO05D002159 1.0e-14 85.1 121 40.5
vmacro13646 Vaccinium macrocarpon HOM05D000367 ORTHO05D002159 1.3e-14 84.7 51 74.5
Lj7C567T7 Lonicera japonica HOM05D000367 ORTHO05D002159 2.9e-14 83.6 119 42.9
Migut.N01486 Erythranthe guttata HOM05D000367 ORTHO05D002159 3.8e-14 83.2 121 42.1
Ciclev10031530m.g Citrus clementina HOM05D000367 ORTHO05D002159 6.5e-14 82.4 117 43.6
Nn3g21316 Nelumbo nucifera HOM05D000367 ORTHO05D002159 6.5e-14 82.4 119 41.2
Nn4g26001 Nelumbo nucifera HOM05D000367 ORTHO05D002159 6.5e-14 82.4 116 42.2
CSS0029625 Camellia sinensis var. sinensis HOM05D000367 ORTHO05D002159 1.1e-13 81.6 48 81.2
CSS0041280 Camellia sinensis var. sinensis HOM05D000367 ORTHO05D002159 1.1e-13 81.6 48 81.2
Atru.chr11.2630 Acer truncatum HOM05D000367 ORTHO05D002159 4.2e-13 79.7 117 40.2
Nitab4.5_0001542g0110 Nicotiana tabacum HOM05D000367 ORTHO05D002159 4.2e-13 79.7 126 38.9
CAN.G1393.19 Capsicum annuum HOM05D000367 ORTHO05D002159 5.5e-13 79.3 126 38.9
Migut.B01341 Erythranthe guttata HOM05D000367 ORTHO05D002159 7.2e-13 79.0 121 37.2
Nitab4.5_0004883g0010 Nicotiana tabacum HOM05D000367 ORTHO05D002159 7.2e-13 79.0 126 38.1
Lsat_1_v5_gn_7_36181 Lactuca sativa HOM05D000367 ORTHO05D002159 1.2e-12 78.2 118 42.4
PGSC0003DMG400025245 Solanum tuberosum HOM05D000367 ORTHO05D002159 1.6e-12 77.8 122 39.3
CSS0030664 Camellia sinensis var. sinensis HOM05D025609 ORTHO05D112493 4.7e-12 76.3 35 91.4
CSS0049232 Camellia sinensis var. sinensis HOM05D025609 ORTHO05D109778 4.7e-12 76.3 35 91.4
Sopen01g033740 Solanum pennellii HOM05D000367 ORTHO05D002159 4.7e-12 76.3 123 38.2
HPP92_008358 Vanilla planifolia HOM05D000367 ORTHO05D002159 4.7e-12 76.3 117 38.5
Cpa.g.sc27.174 Carica papaya HOM05D000367 ORTHO05D002159 6.1e-12 75.9 116 37.1
HanXRQChr17g0563481 Helianthus annuus HOM05D000367 ORTHO05D002159 6.1e-12 75.9 120 38.3
Lsat_1_v5_gn_4_46221 Lactuca sativa HOM05D000367 ORTHO05D002159 6.1e-12 75.9 121 40.5
Solyc01g086740.3 Solanum lycopersicum HOM05D000367 ORTHO05D002159 6.1e-12 75.9 122 38.5
SGA_v2.0_scaffold4G02249 Striga asiatica HOM05D000367 ORTHO05D002159 6.1e-12 75.9 121 37.2
Manes.07G003050 Manihot esculenta HOM05D000367 ORTHO05D002159 8.0e-12 75.5 120 40.8
Cpa.g.sc444.1 Carica papaya HOM05D000367 ORTHO05D002159 1.0e-11 75.1 116 37.1
ECA234G3345 Erigeron canadensis HOM05D000367 ORTHO05D002159 1.0e-11 75.1 120 36.7
unitig_0.g1374 Utricularia gibba HOM05D000367 ORTHO05D002159 1.0e-11 75.1 121 36.4
Manes.10G147900 Manihot esculenta HOM05D000367 ORTHO05D002159 1.4e-11 74.7 119 39.5
Dinv43472 Davidia involucrata HOM05D000367 ORTHO05D002159 1.8e-11 74.3 120 40.0
Hma1.2p1_1745F.1_g300300 Hydrangea macrophylla HOM05D000367 ORTHO05D002159 1.8e-11 74.3 37 89.2
SHI04061 Sapria himalayana HOM05D000367 ORTHO05D002159 2.3e-11 73.9 119 40.3
THA.LOC104819058 Tarenaya hassleriana HOM05D000367 ORTHO05D002159 2.3e-11 73.9 116 38.8
PSO675G1741 Papaver somniferum HOM05D000367 ORTHO05D002159 3.0e-11 73.6 116 40.5
Glyma.12G239500 Glycine max HOM05D000367 ORTHO05D002159 5.2e-11 72.8 123 39.0
Sp2g18480 Schrenkiella parvula HOM05D000367 ORTHO05D002159 5.2e-11 72.8 116 36.2
GSVIVG01032045001 Vitis vinifera HOM05D000367 ORTHO05D002159 5.2e-11 72.8 39 82.1
C07p38870 Brassica napus HOM05D000367 ORTHO05D002159 8.8e-11 72.0 117 39.3
BolC7t44406H Brassica oleracea HOM05D000367 ORTHO05D002159 8.8e-11 72.0 117 39.3
Eucgr.G03399 Eucalyptus grandis HOM05D000367 ORTHO05D002159 8.8e-11 72.0 130 38.5
Potri.001G271300 Populus trichocarpa HOM05D000367 ORTHO05D002159 1.2e-10 71.6 44 72.7
Sabra16G0166700 Salix brachista HOM05D000367 ORTHO05D002159 1.2e-10 71.6 44 72.7
Glyma.09G003500 Glycine max HOM05D000367 ORTHO05D002159 1.5e-10 71.2 123 39.0
PSO541G2823 Papaver somniferum HOM05D000367 ORTHO05D002159 1.5e-10 71.2 116 40.5
Rhsim07G0053700 Rhododendron simsii HOM05D000367 ORTHO05D002159 1.5e-10 71.2 38 84.2
HanXRQChr04g0117371 Helianthus annuus HOM05D000367 ORTHO05D002159 2.0e-10 70.9 117 37.6
Phvul.011G214000 Phaseolus vulgaris HOM05D000367 ORTHO05D002159 2.0e-10 70.9 123 38.2
CARHR258390 Cardamine hirsuta HOM05D000367 ORTHO05D002159 2.6e-10 70.5 116 37.1
TWI53G1193 Tripterygium wilfordii HOM05D000367 ORTHO05D002159 2.6e-10 70.5 37 78.4
AL8G20290 Arabidopsis lyrata HOM05D000367 ORTHO05D002159 3.4e-10 70.1 121 39.7
CDE02G4723 Ceratophyllum demersum HOM05D000367 ORTHO05D002159 3.4e-10 70.1 120 38.3
Oeu043588.1 Olea europaea HOM05D000367 ORTHO05D002159 3.4e-10 70.1 37 83.8
BcaC03g17626 Brassica carinata HOM05D000367 ORTHO05D002159 4.4e-10 69.7 117 40.2
A02p37200 Brassica napus HOM05D000367 ORTHO05D002159 4.4e-10 69.7 117 40.2
A06p39400 Brassica napus HOM05D000367 ORTHO05D002159 4.4e-10 69.7 118 38.1
C02p56230 Brassica napus HOM05D001393 ORTHO05D002159 4.4e-10 69.7 117 40.2
BolC2t11681H Brassica oleracea HOM05D000367 ORTHO05D002159 4.4e-10 69.7 117 40.2
BraA02t08707Z Brassica rapa HOM05D000367 ORTHO05D002159 4.4e-10 69.7 117 40.2
BraA06t26855Z Brassica rapa HOM05D000367 ORTHO05D002159 4.4e-10 69.7 118 38.1
Medtr4g023470 Medicago truncatula HOM05D000367 ORTHO05D002159 4.4e-10 69.7 121 36.4
Potri.009G065500 Populus trichocarpa HOM05D000367 ORTHO05D002159 4.4e-10 69.7 44 70.5
VMungo1127G0263 Vigna mungo HOM05D000367 ORTHO05D002159 4.4e-10 69.7 123 37.4
arahy.Tifrunner.gnm1.ann1.A4UTJD Arachis hypogaea HOM05D000367 ORTHO05D002159 5.7e-10 69.3 121 36.4
Cc02_g27440 Coffea canephora HOM05D000367 ORTHO05D002159 5.7e-10 69.3 41 70.7
Migut.O00892 Erythranthe guttata HOM05D000367 ORTHO05D002159 7.5e-10 68.9 37 81.1
SHI46074 Sapria himalayana HOM05D000024 ORTHO05D000006 7.5e-10 68.9 115 40.9
THA.LOC104826668 Tarenaya hassleriana HOM05D000367 ORTHO05D002159 7.5e-10 68.9 116 37.9
CARHR184280 Cardamine hirsuta HOM05D000367 ORTHO05D002159 9.8e-10 68.6 116 36.2
Lj3g0008595 Lotus japonicus HOM05D000367 ORTHO05D002159 9.8e-10 68.6 121 36.4
Lalb_Chr20g0108121 Lupinus albus HOM05D000367 ORTHO05D002159 9.8e-10 68.6 121 37.2
Thecc.01G414700 Theobroma cacao HOM05D000367 ORTHO05D002159 9.8e-10 68.6 116 34.5
PGR031G3372 Punica granatum HOM05D000367 ORTHO05D002159 1.3e-09 68.2 116 37.9
Aqoxy5G02082 Aquilegia oxysepala HOM05D000367 ORTHO05D002159 1.7e-09 67.8 116 37.1
CANSAT21G1269 Cannabis sativa HOM05D000367 ORTHO05D002159 1.7e-09 67.8 122 35.2
Carub.0008s0758 Capsella rubella HOM05D000367 ORTHO05D002159 1.7e-09 67.8 121 37.2
SGA_v2.0_scaffold260G45867 Striga asiatica HOM05D000367 ORTHO05D002159 1.7e-09 67.8 39 76.9
AT5G48030 Arabidopsis thaliana HOM05D000367 ORTHO05D002159 2.2e-09 67.4 121 38.8
BcaB07g30000 Brassica carinata HOM05D000367 ORTHO05D002159 2.2e-09 67.4 118 39.0
CDE08G0747 Ceratophyllum demersum HOM05D000367 ORTHO05D002159 2.2e-09 67.4 120 36.7
DCAR_029634 Daucus carota HOM05D000367 ORTHO05D002159 2.2e-09 67.4 35 82.9
MD02G1316500 Malus domestica HOM05D000367 ORTHO05D002159 2.2e-09 67.4 122 34.4
TWI73G1149 Tripterygium wilfordii HOM05D000367 ORTHO05D002159 2.2e-09 67.4 120 34.2
CiPaw.13G002000 Carya illinoinensis HOM05D000367 ORTHO05D002159 2.8e-09 67.0 40 75.0
Ca_26435_v3 Cicer arietinum L. HOM05D000367 ORTHO05D002159 2.8e-09 67.0 62 53.2
Haze_03249 Corylus avellana HOM05D000367 ORTHO05D002159 2.8e-09 67.0 40 72.5
Lalb_Chr01g0015241 Lupinus albus HOM05D000367 ORTHO05D002159 2.8e-09 67.0 62 53.2
Psat5g198600 Pisum sativum HOM05D000367 ORTHO05D002159 2.8e-09 67.0 121 35.5
BcaC06g30829 Brassica carinata HOM05D000367 ORTHO05D002159 4.8e-09 66.2 120 37.5
Duzib138G0929 Durio zibethinus HOM05D000367 ORTHO05D002159 4.8e-09 66.2 116 33.6
Hund03677 Selenicereus undatus HOM05D000367 ORTHO05D002159 4.8e-09 66.2 35 82.9
ECA236G3999 Erigeron canadensis HOM05D000367 ORTHO05D002159 6.3e-09 65.9 118 37.3
Thhalv10004199m.g Eutrema salsugineum HOM05D000367 ORTHO05D002159 6.3e-09 65.9 121 38.0
TPR.G9851 Trifolium pratense HOM05D000367 ORTHO05D002159 6.3e-09 65.9 121 33.9
ATR0620G062 Amborella trichopoda HOM05D000367 ORTHO05D002159 8.3e-09 65.5 38 71.1
ATR0810G214 Amborella trichopoda HOM05D000367 ORTHO05D002159 8.3e-09 65.5 38 71.1
arahy.Tifrunner.gnm1.ann1.U3IRLW Arachis hypogaea HOM05D000367 ORTHO05D002159 8.3e-09 65.5 121 34.7
Gohir.A08G053500 Gossypium hirsutum HOM05D000367 ORTHO05D002159 8.3e-09 65.5 117 35.0
Gohir.D08G063000 Gossypium hirsutum HOM05D000367 ORTHO05D002159 8.3e-09 65.5 117 35.0
Gorai.004G065200 Gossypium raimondii HOM05D000367 ORTHO05D002159 8.3e-09 65.5 117 35.0
QL04p003543 Quercus lobata HOM05D000367 ORTHO05D002159 8.3e-09 65.5 39 76.9
QL04p004749 Quercus lobata HOM05D000367 ORTHO05D002159 8.3e-09 65.5 39 76.9
arahy.Tifrunner.gnm1.ann1.SY6123 Arachis hypogaea HOM05D000367 ORTHO05D002159 1.1e-08 65.1 62 50.0
arahy.Tifrunner.gnm1.ann1.XHNB7E Arachis hypogaea HOM05D000367 ORTHO05D002159 1.1e-08 65.1 62 50.0
RcHm_v2.0_Chr1g0314781 Rosa chinensis HOM05D000367 ORTHO05D002159 1.1e-08 65.1 39 69.2
Zm00001eb269180 Zea mays HOM05D000367 ORTHO05D002159 1.1e-08 65.1 118 38.1
Aa31LG11G7470 Aethionema arabicum HOM05D000367 ORTHO05D002159 1.4e-08 64.7 116 35.3
Cfa010724 Carpinus fangiana HOM05D000367 ORTHO05D002159 1.4e-08 64.7 40 70.0
Zm00001eb269190 Zea mays HOM05D000367 ORTHO05D002159 1.8e-08 64.3 119 37.8
Glyma.15G271500 Glycine max HOM05D000367 ORTHO05D002159 2.4e-08 63.9 121 33.1
Medtr3g027580 Medicago truncatula HOM05D000367 ORTHO05D002159 2.4e-08 63.9 51 58.8
Ca_19893_v3 Cicer arietinum L. HOM05D000367 ORTHO05D002159 3.1e-08 63.5 40 67.5
Sc14g0005160 Simmondsia chinensis HOM05D000367 ORTHO05D002159 3.1e-08 63.5 116 33.6
Duzib133G0442 Durio zibethinus HOM05D000367 ORTHO05D002159 4.1e-08 63.2 116 32.8
Lj3g0011204 Lotus japonicus HOM05D000367 ORTHO05D002159 5.4e-08 62.8 36 75.0
Aqoxy5G02083 Aquilegia oxysepala HOM05D000367 ORTHO05D002159 7.0e-08 62.4 36 75.0
EL10Ac3g05078 Beta vulgaris HOM05D000367 ORTHO05D002159 7.0e-08 62.4 35 74.3
Glyma.08G152100 Glycine max HOM05D000367 ORTHO05D002159 9.1e-08 62.0 121 31.4
Os06g0116800 Oryza sativa ssp. japonica HOM05D000367 ORTHO05D002159 9.1e-08 62.0 117 34.2
PSO384G2829 Papaver somniferum HOM05D000367 ORTHO05D002159 9.1e-08 62.0 116 37.1
VMungo1080G1644 Vigna mungo HOM05D000367 ORTHO05D002159 9.1e-08 62.0 62 48.4
MELO3C023526.2 Cucumis melo HOM05D000367 ORTHO05D002159 1.2e-07 61.6 124 31.5
Medtr4g023490 Medicago truncatula HOM05D000367 ORTHO05D002159 1.2e-07 61.6 36 72.2
Prupe.2G007700 Prunus persica HOM05D000367 ORTHO05D002159 1.2e-07 61.6 122 35.2
FvH4_7g00600 Fragaria vesca HOM05D000367 ORTHO05D002159 1.6e-07 61.2 39 66.7
Phvul.005G037400 Phaseolus vulgaris HOM05D000367 ORTHO05D002159 1.6e-07 61.2 62 46.8
unitig_61.g26445 Utricularia gibba HOM05D000367 ORTHO05D002159 2.0e-07 60.8 37 67.6
Sabra09G0048700 Salix brachista HOM05D000367 ORTHO05D002159 2.7e-07 60.5 30 86.7
TPR.G12203 Trifolium pratense HOM05D000009 ORTHO05D002159 2.7e-07 60.5 39 64.1
ClCG09G003900 Citrullus lanatus HOM05D000367 ORTHO05D002159 3.5e-07 60.1 121 28.9
Ah.04g166050 Amaranthus hybridus HOM05D000120 ORTHO05D002159 4.5e-07 59.7 35 68.6
CsaV3_7G031320 Cucumis sativus L. HOM05D000367 ORTHO05D002159 4.5e-07 59.7 121 30.6
PSO339G6027 Papaver somniferum HOM05D000367 ORTHO05D002159 5.9e-07 59.3 37 64.9
Psat7g233360 Pisum sativum HOM05D000367 ORTHO05D002159 7.7e-07 58.9 123 35.0
Sed0023878 Sechium edule HOM05D000367 ORTHO05D002159 1.0e-06 58.5 45 53.3
TAR369G0787 Trochodendron aralioides HOM05D000367 ORTHO05D002159 1.0e-06 58.5 30 86.7
AUR62033187 Chenopodium quinoa HOM05D000367 ORTHO05D002159 1.3e-06 58.2 35 71.4
AUR62043122 Chenopodium quinoa HOM05D000367 ORTHO05D002159 1.3e-06 58.2 35 71.4
TAR623G0541 Trochodendron aralioides HOM05D000367 ORTHO05D002159 1.7e-06 57.8 117 36.8
Zm00001eb054940 Zea mays HOM05D006749 ORTHO05D008352 1.7e-06 57.8 41 61.0
Zm00001eb407790 Zea mays HOM05D000367 ORTHO05D002159 5.0e-06 56.2 35 71.4
Lj9A628G60 Lonicera japonica HOM05D000367 ORTHO05D002159 6.5e-06 55.8 116 34.5
Aqoxy4G02746 Aquilegia oxysepala HOM05D000367 ORTHO05D002159 8.6e-06 55.5 35 68.6
SEGI_20977 Sequoiadendron giganteum HOM05D000367 ORTHO05D002159 8.6e-06 55.5 38 60.5


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