Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0026064 Camellia sinensis var. sinensis HOM05D005940 ORTHO05D007027 1.1e-49 199.5 89 100.0
FAN10G2498 Fragaria x ananassa HOM05D005940 ORTHO05D007027 5.5e-14 80.9 66 57.6
HanXRQChr16g0510921 Helianthus annuus HOM05D005940 ORTHO05D007027 9.5e-14 80.1 47 76.6
GSVIVG01016348001 Vitis vinifera HOM05D005940 ORTHO05D007027 1.2e-13 79.7 47 74.5
FAN06G4195 Fragaria x ananassa HOM05D005940 ORTHO05D007027 1.6e-13 79.3 66 56.1
Hma1.2p1_0192F.1_g083550 Hydrangea macrophylla HOM05D005940 ORTHO05D007027 1.6e-13 79.3 50 74.0
Hma1.2p1_0192F.1_g083560 Hydrangea macrophylla HOM05D005940 ORTHO05D007027 1.6e-13 79.3 50 74.0
Solyc04g049890.4 Solanum lycopersicum HOM05D005940 ORTHO05D007027 1.6e-13 79.3 50 72.0
Sopen04g020430 Solanum pennellii HOM05D005940 ORTHO05D007027 1.6e-13 79.3 50 72.0
PGSC0003DMG400010575 Solanum tuberosum HOM05D005940 ORTHO05D007027 1.6e-13 79.3 50 72.0
FAN01G1689 Fragaria x ananassa HOM05D005940 ORTHO05D007027 2.1e-13 79.0 66 56.1
FAN03G1319 Fragaria x ananassa HOM05D005940 ORTHO05D007027 2.1e-13 79.0 66 56.1
Nitab4.5_0003582g0030 Nicotiana tabacum HOM05D005940 ORTHO05D007027 2.1e-13 79.0 46 76.1
Nitab4.5_0000061g0280 Nicotiana tabacum HOM05D005940 ORTHO05D007027 2.8e-13 78.6 46 76.1
DCAR_019137 Daucus carota HOM05D005940 ORTHO05D007027 3.6e-13 78.2 46 76.1
Sopen09g009530 Solanum pennellii HOM05D005940 ORTHO05D007027 3.6e-13 78.2 50 72.0
Peaxi162Scf00208g00211 Petunia axillaris HOM05D005940 ORTHO05D007027 4.7e-13 77.8 47 72.3
ECA232G2986 Erigeron canadensis HOM05D005940 ORTHO05D007027 8.0e-13 77.0 47 72.3
Lj1A925T62 Lonicera japonica HOM05D005940 ORTHO05D007027 1.0e-12 76.6 47 66.0
CiPaw.02G177100 Carya illinoinensis HOM05D005940 ORTHO05D007027 1.8e-12 75.9 50 66.0
AUR62020800 Chenopodium quinoa HOM05D005940 ORTHO05D007027 3.0e-12 75.1 46 76.1
AUR62027909 Chenopodium quinoa HOM05D005940 ORTHO05D007027 3.0e-12 75.1 46 76.1
Nn2g10645 Nelumbo nucifera HOM05D005940 ORTHO05D007027 8.9e-12 73.6 46 69.6
ECA240G2370 Erigeron canadensis HOM05D005940 ORTHO05D007027 2.0e-11 72.4 46 67.4
FvH4_7g20280 Fragaria vesca HOM05D005940 ORTHO05D007027 2.6e-11 72.0 49 61.2
Oeu055049.1 Olea europaea HOM05D005940 ORTHO05D007027 3.4e-11 71.6 47 61.7
TAR623G0325 Trochodendron aralioides HOM05D005940 ORTHO05D007027 3.4e-11 71.6 50 64.0
Prupe.2G216400 Prunus persica HOM05D005940 ORTHO05D007027 4.4e-11 71.2 70 48.6
RcHm_v2.0_Chr1g0364231 Rosa chinensis HOM05D005940 ORTHO05D007027 4.4e-11 71.2 47 61.7
CANSAT25G0128 Cannabis sativa HOM05D005940 ORTHO05D007027 5.7e-11 70.9 47 63.8
Aqoxy7G03246 Aquilegia oxysepala HOM05D005940 ORTHO05D007027 7.5e-11 70.5 47 66.0
Migut.F01794 Erythranthe guttata HOM05D005940 ORTHO05D007027 7.5e-11 70.5 48 56.2
Lsat_1_v5_gn_1_128021 Lactuca sativa HOM05D005940 ORTHO05D007027 7.5e-11 70.5 47 66.0
Atru.chr12.628 Acer truncatum HOM05D005940 ORTHO05D007027 1.3e-10 69.7 50 60.0
TPR.G5540 Trifolium pratense HOM05D005940 ORTHO05D007027 1.3e-10 69.7 47 59.6
PSO357G0422 Papaver somniferum HOM05D005940 ORTHO05D007027 1.7e-10 69.3 47 63.8
Potri.010G216500 Populus trichocarpa HOM05D005940 ORTHO05D007027 2.2e-10 68.9 50 64.0
SalBow3G3596 Salvia bowleyana HOM05D005940 ORTHO05D007027 2.8e-10 68.6 49 57.1
Prupe.2G219400 Prunus persica HOM05D005940 ORTHO05D007027 3.7e-10 68.2 50 58.0
PSO170G0010 Papaver somniferum HOM05D005940 ORTHO05D007027 4.9e-10 67.8 47 63.8
Cfa001588 Carpinus fangiana HOM05D005940 ORTHO05D007027 6.3e-10 67.4 46 60.9
SGA_v2.0_scaffold122G33246 Striga asiatica HOM05D005940 ORTHO05D007027 8.3e-10 67.0 46 56.5
Cc09_g02600 Coffea canephora HOM05D005940 ORTHO05D007027 1.1e-09 66.6 47 59.6
Lj5g0027680 Lotus japonicus HOM05D005940 ORTHO05D007027 1.1e-09 66.6 46 58.7
PGR102G2278 Punica granatum HOM05D005940 ORTHO05D007027 1.1e-09 66.6 50 58.0
Haze_16941 Corylus avellana HOM05D005940 ORTHO05D007027 1.4e-09 66.2 50 60.0
arahy.Tifrunner.gnm1.ann1.N3JKH2 Arachis hypogaea HOM05D005940 ORTHO05D007027 1.8e-09 65.9 47 55.3
Medtr1g103900 Medicago truncatula HOM05D005940 ORTHO05D007027 2.4e-09 65.5 66 43.9
ClCG02G013840 Citrullus lanatus HOM05D005940 ORTHO05D007027 4.1e-09 64.7 50 54.0
Glyma.20G145700 Glycine max HOM05D005940 ORTHO05D007027 4.1e-09 64.7 47 55.3
Medtr1g103870 Medicago truncatula HOM05D005940 ORTHO05D007027 4.1e-09 64.7 47 53.2
TPR.G40057 Trifolium pratense HOM05D005940 ORTHO05D007027 4.1e-09 64.7 47 55.3
MBI14_g28170_MAGBIO Magnolia biondii HOM05D005940 ORTHO05D007027 5.4e-09 64.3 47 66.0
QL08p056963 Quercus lobata HOM05D005940 ORTHO05D007027 7.0e-09 63.9 47 61.7
Sed0018989 Sechium edule HOM05D005940 ORTHO05D007027 7.0e-09 63.9 47 57.4
CsaV3_5G006320 Cucumis sativus L. HOM05D005940 ORTHO05D007027 1.2e-08 63.2 50 54.0
Phvul.007G056900 Phaseolus vulgaris HOM05D005940 ORTHO05D007027 1.6e-08 62.8 47 53.2
arahy.Tifrunner.gnm1.ann1.3UA0UH Arachis hypogaea HOM05D005940 ORTHO05D007027 2.0e-08 62.4 47 53.2
Ciclev10033357m.g Citrus clementina HOM05D005940 ORTHO05D007027 2.0e-08 62.4 50 54.0
Eucgr.G02795 Eucalyptus grandis HOM05D005940 ORTHO05D007027 2.0e-08 62.4 59 45.8
MD01G1112500 Malus domestica HOM05D005940 ORTHO05D007027 2.0e-08 62.4 50 56.0
Medtr1g030720 Medicago truncatula HOM05D005940 ORTHO05D007027 2.0e-08 62.4 63 42.9
TWI38G0416 Tripterygium wilfordii HOM05D005940 ORTHO05D007027 1.0e-07 60.1 47 51.1
CAN.G693.9 Capsicum annuum HOM05D005940 ORTHO05D007027 2.3e-07 58.9 35 71.4
Lalb_Chr21g0304671 Lupinus albus HOM05D005940 ORTHO05D007027 5.0e-07 57.8 65 46.2
Duzib114G0016 Durio zibethinus HOM05D005940 ORTHO05D007027 6.6e-07 57.4 47 57.4
Sc06g0001810 Simmondsia chinensis HOM05D005940 ORTHO05D007027 6.6e-07 57.4 50 60.0
Gorai.012G093100 Gossypium raimondii HOM05D005940 ORTHO05D007027 8.6e-07 57.0 47 57.4
EL10Ac2g03550 Beta vulgaris HOM05D005940 ORTHO05D007027 3.3e-06 55.1 35 68.6
COL.COLO4_23758 Corchorus olitorius HOM05D005940 ORTHO05D007027 5.6e-06 54.3 46 56.5
Hund22470 Selenicereus undatus HOM05D005940 ORTHO05D007027 5.6e-06 54.3 38 63.2


User provided reference genes

Program Settings