Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0026056 Camellia sinensis var. sinensis HOM05D007827 ORTHO05D009749 5.1e-108 394.4 202 100.0
CSS0031213 Camellia sinensis var. sinensis HOM05D007827 ORTHO05D009749 5.7e-75 284.6 229 68.6
CSS0037057 Camellia sinensis var. sinensis HOM05D007827 ORTHO05D009749 7.8e-48 194.5 188 58.5
Rhsim11G0042400 Rhododendron simsii HOM05D007827 ORTHO05D009749 6.6e-47 191.4 226 51.3
Actinidia01227 Actinidia chinensis HOM05D007827 ORTHO05D009749 4.9e-42 175.3 220 50.0
CSS0004361 Camellia sinensis var. sinensis HOM05D007827 ORTHO05D009749 7.3e-38 161.4 236 44.1
Hma1.2p1_0801F.1_g220250 Hydrangea macrophylla HOM05D007827 ORTHO05D009749 1.1e-36 157.5 227 49.8
Hma1.2p1_1933F.1_g308040 Hydrangea macrophylla HOM05D007827 ORTHO05D009749 2.7e-32 142.9 227 46.7
Cc08_g10870 Coffea canephora HOM05D007827 ORTHO05D009749 6.6e-31 138.3 230 41.3
Dinv28003 Davidia involucrata HOM05D007827 ORTHO05D009749 7.3e-30 134.8 216 41.2
Nitab4.5_0007037g0010 Nicotiana tabacum HOM05D007827 ORTHO05D009749 3.8e-26 122.5 234 39.7
Nitab4.5_0002039g0090 Nicotiana tabacum HOM05D007827 ORTHO05D009749 4.9e-26 122.1 234 39.3
Peaxi162Scf00297g00062 Petunia axillaris HOM05D007827 ORTHO05D009749 8.4e-26 121.3 233 39.1
CAN.G130.10 Capsicum annuum HOM05D007827 ORTHO05D009749 4.2e-25 119.0 214 40.7
Solyc06g011440.1 Solanum lycopersicum HOM05D007827 ORTHO05D009749 5.4e-25 118.6 205 40.5
Sopen06g006480 Solanum pennellii HOM05D007827 ORTHO05D009749 5.4e-25 118.6 205 40.5
Nitab4.5_0000972g0020 Nicotiana tabacum HOM05D007827 ORTHO05D009749 1.3e-23 114.0 216 38.4
CiPaw.16G027300 Carya illinoinensis HOM05D007827 ORTHO05D009749 3.9e-23 112.5 205 35.1
Oeu018628.1 Olea europaea HOM05D007827 ORTHO05D009749 6.7e-23 111.7 200 42.5
Lalb_Chr23g0267841 Lupinus albus HOM05D007827 ORTHO05D009749 1.5e-22 110.5 205 37.6
Nitab4.5_0007177g0010 Nicotiana tabacum HOM05D007827 ORTHO05D009749 1.5e-22 110.5 216 38.4
Haze_18158 Corylus avellana HOM05D007827 ORTHO05D009749 7.4e-22 108.2 211 37.4
Peaxi162Scf01001g00001 Petunia axillaris HOM05D007827 ORTHO05D009749 9.6e-22 107.8 214 37.4
QL02p000760 Quercus lobata HOM05D007827 ORTHO05D009749 2.8e-21 106.3 215 36.7
MELO3C011460.2 Cucumis melo HOM05D007827 ORTHO05D009749 1.1e-20 104.4 215 35.3
CsaV3_6G032200 Cucumis sativus L. HOM05D007827 ORTHO05D009749 1.1e-20 104.4 212 34.4
Aqoxy7G01166 Aquilegia oxysepala HOM05D007827 ORTHO05D009749 1.2e-19 100.9 215 34.9
ClCG08G010040 Citrullus lanatus HOM05D007827 ORTHO05D009749 1.2e-19 100.9 216 32.9
MD15G1056900 Malus domestica HOM05D007827 ORTHO05D009749 1.3e-18 97.4 218 35.8
Sabra06G0174900 Salix brachista HOM05D007827 ORTHO05D009749 1.3e-18 97.4 190 37.4
PGSC0003DMG400029878 Solanum tuberosum HOM05D007827 ORTHO05D009749 2.9e-18 96.3 207 38.2
Cpa.g.sc7.157 Carica papaya HOM05D007827 ORTHO05D009749 6.5e-18 95.1 217 37.3
Prupe.1G409500 Prunus persica HOM05D007827 ORTHO05D009749 2.5e-17 93.2 215 31.6
Phvul.009G078700 Phaseolus vulgaris HOM05D007827 ORTHO05D009749 5.5e-17 92.0 215 34.0
PGSC0003DMG400008199 Solanum tuberosum HOM05D007827 ORTHO05D009749 7.1e-17 91.7 240 35.4
Lj1g0018619 Lotus japonicus HOM05D007827 ORTHO05D009749 9.3e-17 91.3 218 34.4
SalBow4G1896 Salvia bowleyana HOM05D007827 ORTHO05D009749 9.3e-17 91.3 142 43.7
Medtr3g104620 Medicago truncatula HOM05D007827 ORTHO05D009749 1.6e-16 90.5 226 30.1
Oeu047101.1 Olea europaea HOM05D007827 ORTHO05D009749 1.6e-16 90.5 63 68.3
TAR626G1076 Trochodendron aralioides HOM05D007827 ORTHO05D009749 2.1e-16 90.1 212 32.1
DCAR_003136 Daucus carota HOM05D007827 ORTHO05D009749 2.7e-16 89.7 195 34.4
Sed0014394 Sechium edule HOM05D007827 ORTHO05D009749 2.7e-16 89.7 194 33.0
Solyc08g062840.1 Solanum lycopersicum HOM05D007827 ORTHO05D009749 3.5e-16 89.4 231 35.5
Potri.006G226200 Populus trichocarpa HOM05D007827 ORTHO05D009749 6.0e-16 88.6 144 41.0
Thecc.09G056900 Theobroma cacao HOM05D007827 ORTHO05D009749 6.0e-16 88.6 213 30.5
Ciclev10010468m.g Citrus clementina HOM05D007827 ORTHO05D009749 7.9e-16 88.2 190 34.2
Sopen08g018370 Solanum pennellii HOM05D007827 ORTHO05D009749 7.9e-16 88.2 214 37.9
SGA_v2.0_scaffold20G09207 Striga asiatica HOM05D007827 ORTHO05D009749 7.9e-16 88.2 100 53.0
Migut.A00115 Erythranthe guttata HOM05D007827 ORTHO05D009749 1.0e-15 87.8 73 61.6
Lsat_1_v5_gn_6_13921 Lactuca sativa HOM05D007827 ORTHO05D009749 1.3e-15 87.4 216 34.3
Atru.chr7.1942 Acer truncatum HOM05D007827 ORTHO05D009749 2.5e-14 83.2 90 54.4
MBI04_g36906_MAGBIO Magnolia biondii HOM05D007827 ORTHO05D009749 2.5e-14 83.2 209 34.0
Manes.16G082000 Manihot esculenta HOM05D007827 ORTHO05D009749 4.3e-14 82.4 205 34.1
THA.LOC104799160 Tarenaya hassleriana HOM05D007827 ORTHO05D009749 7.4e-14 81.6 195 32.3
Psat5g036160 Pisum sativum HOM05D007827 ORTHO05D009749 2.1e-13 80.1 229 29.7
Sed0025262 Sechium edule HOM05D007827 ORTHO05D009749 2.1e-13 80.1 202 31.2
Gorai.009G043700 Gossypium raimondii HOM05D007827 ORTHO05D009749 4.8e-13 79.0 173 31.2
VMungo1309G0458 Vigna mungo HOM05D007827 ORTHO05D009749 4.8e-13 79.0 199 30.2
Glyma.04G052400 Glycine max HOM05D007827 ORTHO05D009749 6.2e-13 78.6 185 32.4
Medtr1g015840 Medicago truncatula HOM05D007827 ORTHO05D009749 6.2e-13 78.6 213 30.0
Gohir.D05G042650 Gossypium hirsutum HOM05D007827 ORTHO05D009749 4.1e-12 75.9 173 31.2
ATR0789G035 Amborella trichopoda HOM05D007827 ORTHO05D009749 5.3e-12 75.5 62 58.1
COL.COLO4_08756 Corchorus olitorius HOM05D030950 ORTHO05D009749 6.9e-12 75.1 207 31.4
HPP92_007654 Vanilla planifolia HOM05D007827 ORTHO05D009749 9.0e-12 74.7 65 55.4
FAN24G3029 Fragaria x ananassa HOM05D007827 ORTHO05D009749 1.5e-11 73.9 258 29.5
FvH4_2g31620 Fragaria vesca HOM05D007827 ORTHO05D009749 2.6e-11 73.2 257 30.4
RcHm_v2.0_Chr6g0311201 Rosa chinensis HOM05D007827 ORTHO05D009749 4.5e-11 72.4 252 29.8
Lj5g0025960 Lotus japonicus HOM05D007827 ORTHO05D009749 7.6e-11 71.6 226 29.6
HPP92_009146 Vanilla planifolia HOM05D007827 ORTHO05D009749 3.8e-10 69.3 153 32.7
ECA240G3049 Erigeron canadensis HOM05D007827 ORTHO05D009749 8.4e-10 68.2 219 30.6
unitig_37.g12945 Utricularia gibba HOM05D007827 ORTHO05D009749 8.4e-10 68.2 60 53.3
arahy.Tifrunner.gnm1.ann1.WVJ8VS Arachis hypogaea HOM05D007827 ORTHO05D009749 1.4e-09 67.4 188 31.4
Gohir.A05G040950 Gossypium hirsutum HOM05D007827 ORTHO05D009749 2.5e-09 66.6 173 27.7
Phvul.001G037300 Phaseolus vulgaris HOM05D007827 ORTHO05D009749 4.2e-09 65.9 234 28.2
Psat6g021400 Pisum sativum HOM05D007827 ORTHO05D009749 1.2e-08 64.3 208 31.2
FAN15G3566 Fragaria x ananassa HOM05D007827 ORTHO05D009749 1.6e-08 63.9 256 27.7
arahy.Tifrunner.gnm1.ann1.S72ULK Arachis hypogaea HOM05D007827 ORTHO05D009749 2.7e-08 63.2 199 28.6
TPR.G3528 Trifolium pratense HOM05D007827 ORTHO05D009749 1.8e-07 60.5 252 25.8
Glyma.14G097100 Glycine max HOM05D007827 ORTHO05D009749 2.3e-07 60.1 247 26.7
SGA_v2.0_scaffold169G38700 Striga asiatica HOM05D007827 ORTHO05D009749 5.1e-07 58.9 90 38.9
VMungo0647G1789 Vigna mungo HOM05D007827 ORTHO05D009749 5.7e-06 55.5 222 23.9
AL6G38110 Arabidopsis lyrata HOM05D002043 ORTHO05D002207 7.4e-06 55.1 130 36.9
FAN27G2967 Fragaria x ananassa HOM05D007827 ORTHO05D009749 7.4e-06 55.1 42 61.9
Sp2g21610 Schrenkiella parvula HOM05D002043 ORTHO05D009749 9.7e-06 54.7 201 30.3


User provided reference genes

Program Settings