Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0026032 Camellia sinensis var. sinensis HOM05D006105 ORTHO05D006345 1.8e-232 808.9 410 100.0
Actinidia35226 Actinidia chinensis HOM05D006105 ORTHO05D006345 9.7e-146 520.8 430 68.1
Actinidia18787 Actinidia chinensis HOM05D006105 ORTHO05D006345 5.9e-143 511.5 437 68.6
CSS0022090 Camellia sinensis var. sinensis HOM05D006105 ORTHO05D006345 1.1e-128 464.2 457 60.2
CSS0004572 Camellia sinensis var. sinensis HOM05D006105 ORTHO05D006345 1.5e-114 417.2 222 91.9
Rhsim04G0024000 Rhododendron simsii HOM05D006105 ORTHO05D006345 4.8e-113 412.1 456 54.8
Dinv14962 Davidia involucrata HOM05D006105 ORTHO05D006345 1.1e-112 411.0 382 61.5
Rhsim06G0204700 Rhododendron simsii HOM05D006105 ORTHO05D006345 4.7e-100 369.0 447 54.6
Actinidia07497 Actinidia chinensis HOM05D006105 ORTHO05D006345 1.8e-99 367.1 411 56.2
Hma1.2p1_0416F.1_g148610 Hydrangea macrophylla HOM05D006105 ORTHO05D006345 1.5e-98 364.0 419 56.8
Hma1.2p1_0688F.1_g203660 Hydrangea macrophylla HOM05D006105 ORTHO05D006345 1.6e-92 344.0 398 54.8
Dinv18338 Davidia involucrata HOM05D006105 ORTHO05D006345 1.6e-87 327.4 303 62.4
Lj8A152T79 Lonicera japonica HOM05D006105 ORTHO05D006345 5.0e-86 322.4 353 54.7
QL08p027367 Quercus lobata HOM05D006105 ORTHO05D006345 2.3e-83 313.5 404 51.2
Prupe.4G171200 Prunus persica HOM05D006105 ORTHO05D006345 1.2e-79 301.2 458 46.1
GSVIVG01014239001 Vitis vinifera HOM05D006105 ORTHO05D006345 3.0e-78 296.6 405 47.9
FAN21G1974 Fragaria x ananassa HOM05D006105 ORTHO05D006345 2.3e-75 287.0 455 44.8
Nitab4.5_0005445g0040 Nicotiana tabacum HOM05D006105 ORTHO05D006345 3.1e-75 286.6 440 46.1
Oeu005394.1 Olea europaea HOM05D006105 ORTHO05D006345 3.4e-74 283.1 403 47.9
MSTRG.14216 Avicennia marina HOM05D006105 ORTHO05D006345 9.9e-74 281.6 415 44.6
Sopen12g005900 Solanum pennellii HOM05D006105 ORTHO05D006345 7.1e-72 275.4 413 44.8
FAN16G1829 Fragaria x ananassa HOM05D006105 ORTHO05D006345 9.2e-72 275.0 459 42.9
Thecc.07G103600 Theobroma cacao HOM05D006105 ORTHO05D006345 6.0e-71 272.3 426 48.6
FvH4_3g18750 Fragaria vesca HOM05D006105 ORTHO05D006345 7.8e-71 271.9 458 43.7
Haze_09360 Corylus avellana HOM05D006105 ORTHO05D006345 5.1e-70 269.2 407 49.6
FAN25G1303 Fragaria x ananassa HOM05D006105 ORTHO05D006345 5.1e-70 269.2 459 42.7
DCAR_019586 Daucus carota HOM05D006105 ORTHO05D006345 1.1e-69 268.1 434 44.2
Ciclev10010617m.g Citrus clementina HOM05D006105 ORTHO05D006345 1.5e-69 267.7 439 43.1
COL.COLO4_17616 Corchorus olitorius HOM05D006105 ORTHO05D006345 2.5e-69 266.9 465 44.7
Gohir.A08G021700 Gossypium hirsutum HOM05D006105 ORTHO05D006345 4.3e-69 266.2 422 47.4
RcHm_v2.0_Chr5g0031561 Rosa chinensis HOM05D006105 ORTHO05D006345 7.3e-69 265.4 453 43.9
FAN11G0448 Fragaria x ananassa HOM05D006105 ORTHO05D006345 1.2e-68 264.6 459 43.4
PGSC0003DMG400015376 Solanum tuberosum HOM05D006105 ORTHO05D006345 1.8e-67 260.8 440 42.0
Duzib213G0100 Durio zibethinus HOM05D006105 ORTHO05D006345 3.1e-67 260.0 451 44.8
Gorai.004G029900 Gossypium raimondii HOM05D006105 ORTHO05D006345 4.0e-67 259.6 421 47.5
Gohir.D08G032500 Gossypium hirsutum HOM05D006105 ORTHO05D006345 1.5e-66 257.7 423 47.0
HanXRQChr10g0304731 Helianthus annuus HOM05D006105 ORTHO05D006345 7.6e-66 255.4 446 44.4
Cfa019604 Carpinus fangiana HOM05D006105 ORTHO05D006345 2.9e-65 253.4 401 48.1
MD03G1238800 Malus domestica HOM05D006105 ORTHO05D006345 3.2e-64 250.0 437 43.9
Duzib268G0903 Durio zibethinus HOM05D006105 ORTHO05D006345 1.6e-63 247.7 417 46.3
Peaxi162Scf00000g02515 Petunia axillaris HOM05D006105 ORTHO05D006345 4.6e-63 246.1 413 45.0
Cpa.g.sc131.73 Carica papaya HOM05D006105 ORTHO05D006345 3.9e-62 243.0 454 42.1
Manes.03G103501 Manihot esculenta HOM05D006105 ORTHO05D006345 5.1e-62 242.7 436 42.9
CiPaw.12G115300 Carya illinoinensis HOM05D006105 ORTHO05D006345 1.6e-60 237.7 404 44.3
TWI38G0440 Tripterygium wilfordii HOM05D006105 ORTHO05D006345 8.1e-60 235.3 417 44.4
TAR629G1657 Trochodendron aralioides HOM05D006105 ORTHO05D006345 1.1e-59 235.0 426 44.4
ECA234G3938 Erigeron canadensis HOM05D006105 ORTHO05D006345 1.4e-59 234.6 463 43.2
Nitab4.5_0003202g0040 Nicotiana tabacum HOM05D006105 ORTHO05D006345 1.2e-58 231.5 425 42.1
CiPaw.11G164300 Carya illinoinensis HOM05D006105 ORTHO05D006345 1.3e-57 228.0 413 45.3
TAR629G0423 Trochodendron aralioides HOM05D000109 ORTHO05D000965 2.2e-57 227.3 420 40.7
Nitab4.5_0003077g0030 Nicotiana tabacum HOM05D006105 ORTHO05D006345 7.1e-56 222.2 457 39.4
MSTRG.14950 Avicennia marina HOM05D006105 ORTHO05D006345 9.3e-56 221.9 432 40.3
Cc05_g11450 Coffea canephora HOM05D006105 ORTHO05D006345 3.0e-54 216.9 253 49.8
Peaxi162Scf00069g01930 Petunia axillaris HOM05D006105 ORTHO05D006345 3.9e-54 216.5 422 38.6
Gorai.002G064700 Gossypium raimondii HOM05D006105 ORTHO05D006345 1.1e-53 214.9 425 43.5
DCAR_013141 Daucus carota HOM05D006105 ORTHO05D006345 1.5e-53 214.5 392 39.5
Potri.001G375600 Populus trichocarpa HOM05D006105 ORTHO05D006345 1.5e-53 214.5 441 39.9
Nn1g09023 Nelumbo nucifera HOM05D006105 ORTHO05D006345 5.6e-53 212.6 457 42.2
Nitab4.5_0000246g0110 Nicotiana tabacum HOM05D006105 ORTHO05D006345 7.3e-53 212.2 415 40.5
Oeu059277.1 Olea europaea HOM05D006105 ORTHO05D006345 2.8e-52 210.3 416 39.9
PSO541G5705 Papaver somniferum HOM05D006105 ORTHO05D006345 8.1e-52 208.8 447 39.6
Lsat_1_v5_gn_5_129201 Lactuca sativa HOM05D006105 ORTHO05D006345 1.8e-51 207.6 463 39.3
Gohir.D01G045100 Gossypium hirsutum HOM05D006105 ORTHO05D006345 4.0e-51 206.5 425 42.6
MD11G1258600 Malus domestica HOM05D006105 ORTHO05D006345 2.6e-50 203.8 436 39.9
PSO675G6909 Papaver somniferum HOM05D006105 ORTHO05D006345 2.4e-48 197.2 449 39.0
VMungo1080G1877 Vigna mungo HOM05D006105 ORTHO05D006345 3.2e-48 196.8 413 40.2
Sc03g0010360 Simmondsia chinensis HOM05D006105 ORTHO05D006345 4.2e-48 196.4 366 42.6
AUR62019562 Chenopodium quinoa HOM05D006105 ORTHO05D006345 1.0e-46 191.8 429 39.2
TWI39G0145 Tripterygium wilfordii HOM05D006105 ORTHO05D006345 3.9e-46 189.9 450 40.4
HanXRQChr12g0372831 Helianthus annuus HOM05D006105 ORTHO05D006345 6.7e-46 189.1 423 39.5
Phvul.005G068000 Phaseolus vulgaris HOM05D006105 ORTHO05D006345 6.7e-46 189.1 415 39.0
ClCG11G017660 Citrullus lanatus HOM05D006105 ORTHO05D006345 7.4e-45 185.7 457 38.5
AUR62037870 Chenopodium quinoa HOM05D006105 ORTHO05D006345 6.2e-44 182.6 447 36.9
Glyma.12G228100 Glycine max HOM05D006105 ORTHO05D006345 8.1e-44 182.2 420 40.5
Atru.chr2.2260 Acer truncatum HOM05D006105 ORTHO05D006345 1.8e-43 181.0 381 39.6
MELO3C025628.2 Cucumis melo HOM05D006105 ORTHO05D006345 2.4e-43 180.6 450 37.6
CsaV3_4G033280 Cucumis sativus L. HOM05D006105 ORTHO05D006345 4.0e-43 179.9 448 38.4
Sed0005720 Sechium edule HOM05D006105 ORTHO05D006345 1.5e-42 177.9 445 37.1
Solyc07g062685.2 Solanum lycopersicum HOM05D006105 ORTHO05D006345 4.5e-42 176.4 416 36.1
CsaV3_4G008420 Cucumis sativus L. HOM05D006105 ORTHO05D006345 5.8e-42 176.0 410 38.5
PGSC0003DMG400021273 Solanum tuberosum HOM05D006105 ORTHO05D006345 1.7e-41 174.5 387 35.7
Glyma.13G271900 Glycine max HOM05D006105 ORTHO05D006345 2.9e-41 173.7 417 38.8
Solyc12g014120.3 Solanum lycopersicum HOM05D006105 ORTHO05D006345 2.9e-41 173.7 264 42.8
DCAR_021012 Daucus carota HOM05D006105 ORTHO05D006345 8.4e-41 172.2 379 39.1
Sopen07g030920 Solanum pennellii HOM05D006105 ORTHO05D006345 4.2e-40 169.9 418 35.9
MBI07_g17039_MAGBIO Magnolia biondii HOM05D006105 ORTHO05D006345 1.2e-39 168.3 401 41.1
ClCG07G009910 Citrullus lanatus HOM05D006105 ORTHO05D006345 1.6e-39 167.9 403 37.7
Lalb_Chr25g0286021 Lupinus albus HOM05D006105 ORTHO05D006345 1.6e-39 167.9 413 38.0
Lj3g0024128 Lotus japonicus HOM05D006105 ORTHO05D006345 3.5e-39 166.8 410 39.3
MELO3C016090.2 Cucumis melo HOM05D006105 ORTHO05D006345 4.6e-39 166.4 411 37.5
Oeu061338.1 Olea europaea HOM05D006105 ORTHO05D006345 7.9e-39 165.6 219 47.5
Sabra16G0247400 Salix brachista HOM05D006105 ORTHO05D006345 1.3e-38 164.9 415 38.1
DCAR_024487 Daucus carota HOM05D006105 ORTHO05D006345 2.5e-37 160.6 329 36.5
Sed0026435 Sechium edule HOM05D006105 ORTHO05D006345 2.8e-36 157.1 412 38.1
Sed0015488 Sechium edule HOM05D006105 ORTHO05D006345 6.3e-36 156.0 405 37.3
SGA_v2.0_scaffold73G24208 Striga asiatica HOM05D006105 ORTHO05D006345 5.3e-35 152.9 412 35.7
Gohir.A01G059000 Gossypium hirsutum HOM05D006105 ORTHO05D006345 1.2e-34 151.8 270 44.8
Aqoxy1G02199 Aquilegia oxysepala HOM05D006105 ORTHO05D006345 1.9e-32 144.4 455 36.5
Ca_04016_v3 Cicer arietinum L. HOM05D006105 ORTHO05D006345 4.2e-32 143.3 465 35.3
arahy.Tifrunner.gnm1.ann1.KE6FEG Arachis hypogaea HOM05D006105 ORTHO05D006345 9.3e-32 142.1 395 34.4
arahy.Tifrunner.gnm1.ann1.LEI4AX Arachis hypogaea HOM05D006105 ORTHO05D006345 4.6e-31 139.8 410 33.4
Medtr2g078220 Medicago truncatula HOM05D006105 ORTHO05D006345 3.9e-30 136.7 432 34.3
SGA_v2.0_scaffold34G13768 Striga asiatica HOM05D006105 ORTHO05D006345 1.1e-29 135.2 398 34.7
Glyma.06G232600 Glycine max HOM05D006105 ORTHO05D006345 2.2e-28 131.0 390 33.6
SalBow7G3373 Salvia bowleyana HOM05D006105 ORTHO05D006345 2.2e-28 131.0 315 37.5
SalBow7G2198 Salvia bowleyana HOM05D006105 ORTHO05D006345 6.3e-28 129.4 315 37.1
SalBow8G2605 Salvia bowleyana HOM05D006105 ORTHO05D006345 9.0e-27 125.6 395 32.7
TPR.G9213 Trifolium pratense HOM05D006105 ORTHO05D006345 1.2e-26 125.2 456 33.6
ECA236G3415 Erigeron canadensis HOM05D006105 ORTHO05D006345 1.5e-26 124.8 303 36.6
PGR083G1480 Punica granatum HOM05D006105 ORTHO05D006345 3.4e-26 123.6 435 33.1
Dinv17387 Davidia involucrata HOM05D006105 ORTHO05D006345 5.9e-26 122.9 422 36.0
arahy.Tifrunner.gnm1.ann1.TTJ9YL Arachis hypogaea HOM05D006105 ORTHO05D006345 2.2e-25 120.9 393 32.8
PGSC0003DMG400012397 Solanum tuberosum HOM05D006105 ORTHO05D006345 3.8e-25 120.2 219 38.8
Migut.M00751 Erythranthe guttata HOM05D006105 ORTHO05D006345 1.9e-24 117.9 390 33.6
Eucgr.F01202 Eucalyptus grandis HOM05D006105 ORTHO05D006345 2.7e-23 114.0 292 35.6
Nn1g04330 Nelumbo nucifera HOM05D006105 ORTHO05D006345 3.0e-22 110.5 266 39.8
Psat5g240600 Pisum sativum HOM05D006105 ORTHO05D006345 1.5e-21 108.2 260 38.8
Lsat_1_v5_gn_7_103061 Lactuca sativa HOM05D006105 ORTHO05D006345 5.7e-21 106.3 418 31.6
Sopen10g003350 Solanum pennellii HOM05D016660 ORTHO05D006345 9.7e-21 105.5 206 37.4
TAR627G0886 Trochodendron aralioides HOM05D000157 ORTHO05D006345 9.7e-21 105.5 232 40.5
Aqoxy4G00493 Aquilegia oxysepala HOM05D006105 ORTHO05D006345 3.1e-19 100.5 469 28.4
CANSAT35G1552 Cannabis sativa HOM05D006105 ORTHO05D006345 4.1e-19 100.1 430 30.7
VMungo1127G1756 Vigna mungo HOM05D006105 ORTHO05D006345 1.7e-17 94.7 293 33.4
Phvul.011G157100 Phaseolus vulgaris HOM05D006105 ORTHO05D006345 3.8e-17 93.6 385 30.9
Manes.16G035200 Manihot esculenta HOM05D013066 ORTHO05D006345 2.5e-16 90.9 423 30.5
Manes.17G052800 Manihot esculenta HOM05D013066 ORTHO05D010890 2.1e-15 87.8 410 28.5
Solyc10g007156.2 Solanum lycopersicum HOM05D016660 ORTHO05D006345 6.1e-15 86.3 189 36.5
Thecc.06G176400 Theobroma cacao HOM05D013066 ORTHO05D010890 1.3e-12 78.6 452 27.9
Oeu051102.1 Olea europaea HOM05D006105 ORTHO05D006345 1.7e-12 78.2 108 42.6
Glyma.06G232800 Glycine max HOM05D006105 ORTHO05D006345 2.8e-12 77.4 211 36.0
ATR0602G093 Amborella trichopoda HOM05D006105 ORTHO05D006345 3.7e-12 77.0 226 32.3
GSVIVG01021165001 Vitis vinifera HOM05D006105 ORTHO05D006345 4.8e-12 76.6 418 28.0
Sopen10g003360 Solanum pennellii HOM05D016660 ORTHO05D006345 3.1e-11 73.9 389 26.5
CiPaw.09G066800 Carya illinoinensis HOM05D009670 ORTHO05D010890 2.0e-10 71.2 452 27.4
HanXRQChr17g0545011 Helianthus annuus HOM05D006105 ORTHO05D006345 2.6e-10 70.9 182 33.0
PGSC0003DMG400044967 Solanum tuberosum HOM05D016660 ORTHO05D006345 1.3e-09 68.6 392 26.0
Gohir.A13G148200 Gossypium hirsutum HOM05D006105 ORTHO05D006345 1.7e-09 68.2 273 33.7
Migut.H01972 Erythranthe guttata HOM05D006105 ORTHO05D006345 3.2e-08 63.9 187 33.2
Gohir.A05G157001 Gossypium hirsutum HOM05D013066 ORTHO05D010890 3.2e-08 63.9 374 26.7
MBI06_g46086_MAGBIO Magnolia biondii HOM05D026394 ORTHO05D030051 1.6e-07 61.6 118 40.7
PGSC0003DMG400021274 Solanum tuberosum HOM05D016660 ORTHO05D006345 1.6e-07 61.6 381 24.1
Ca_00413_v3 Cicer arietinum L. HOM05D009670 ORTHO05D010890 2.1e-07 61.2 439 25.5
Ca_30157_v3 Cicer arietinum L. HOM05D009670 ORTHO05D010890 2.1e-07 61.2 439 25.5
Gohir.D05G159900 Gossypium hirsutum HOM05D013066 ORTHO05D010890 4.7e-07 60.1 360 27.2
Sopen10g003370 Solanum pennellii HOM05D016660 ORTHO05D006345 1.0e-06 58.9 392 25.3
SEGI_16969 Sequoiadendron giganteum HOM05D016559 ORTHO05D019650 1.4e-06 58.5 274 28.5
MBI06_g40465_MAGBIO Magnolia biondii HOM05D026394 ORTHO05D030051 1.8e-06 58.2 118 39.8
Gorai.009G164800 Gossypium raimondii HOM05D013066 ORTHO05D010890 5.2e-06 56.6 374 25.9


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