Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0025953 Camellia sinensis var. sinensis HOM05D006520 ORTHO05D008405 2.9e-191 671.8 350 100.0
vmacro11755 Vaccinium macrocarpon HOM05D006520 ORTHO05D008405 2.6e-168 595.5 350 88.0
Dinv22290 Davidia involucrata HOM05D006520 ORTHO05D008405 5.7e-163 577.8 351 84.9
QL08p012619 Quercus lobata HOM05D006520 ORTHO05D008405 1.6e-157 559.7 353 82.7
Oeu021407.1 Olea europaea HOM05D006520 ORTHO05D008405 1.4e-156 556.6 351 81.8
Cc05_g13380 Coffea canephora HOM05D006520 ORTHO05D008405 2.0e-155 552.7 351 81.2
Lj8A167T45 Lonicera japonica HOM05D006520 ORTHO05D008405 9.7e-155 550.4 350 80.6
CiPaw.11G185500 Carya illinoinensis HOM05D006520 ORTHO05D008405 6.3e-154 547.7 356 80.6
Cfa020400 Carpinus fangiana HOM05D006520 ORTHO05D008405 3.1e-153 545.4 350 80.6
MD03G1209400 Malus domestica HOM05D006520 ORTHO05D008405 3.1e-153 545.4 354 79.4
TWI38G0825 Tripterygium wilfordii HOM05D006520 ORTHO05D008405 3.1e-153 545.4 352 78.4
Duzib213G0852 Durio zibethinus HOM05D006520 ORTHO05D008405 5.3e-153 544.7 331 83.1
Migut.M01795 Erythranthe guttata HOM05D006520 ORTHO05D008405 5.3e-153 544.7 351 79.8
Nitab4.5_0004600g0010 Nicotiana tabacum HOM05D006520 ORTHO05D008405 1.6e-152 543.1 351 80.3
Nitab4.5_0000653g0110 Nicotiana tabacum HOM05D006520 ORTHO05D008405 2.0e-152 542.7 351 80.3
TAR362G1255 Trochodendron aralioides HOM05D006520 ORTHO05D008405 1.3e-151 540.0 360 76.9
GSVIVG01001984001 Vitis vinifera HOM05D006520 ORTHO05D008405 2.9e-151 538.9 332 83.1
Eucgr.F00972 Eucalyptus grandis HOM05D006520 ORTHO05D008405 8.5e-151 537.3 332 82.5
Sed0027741 Sechium edule HOM05D006520 ORTHO05D008405 1.1e-150 537.0 336 81.2
RcHm_v2.0_Chr5g0037851 Rosa chinensis HOM05D006520 ORTHO05D008405 1.9e-150 536.2 355 78.6
AUR62043225 Chenopodium quinoa HOM05D006520 ORTHO05D008405 3.2e-150 535.4 350 77.7
Haze_09634 Corylus avellana HOM05D006520 ORTHO05D008405 1.2e-149 533.5 364 77.2
Hund18268 Selenicereus undatus HOM05D006520 ORTHO05D008405 1.2e-149 533.5 352 78.1
Ciclev10008777m.g Citrus clementina HOM05D006520 ORTHO05D008405 2.1e-149 532.7 332 81.3
FAN16G1768 Fragaria x ananassa HOM05D006520 ORTHO05D008405 2.1e-149 532.7 356 76.7
Thecc.07G046500 Theobroma cacao HOM05D006520 ORTHO05D008405 2.1e-149 532.7 335 79.7
AUR62020529 Chenopodium quinoa HOM05D006520 ORTHO05D008405 4.7e-149 531.6 350 77.1
FvH4_3g22000 Fragaria vesca HOM05D006520 ORTHO05D008405 4.7e-149 531.6 355 76.6
Potri.011G135600 Populus trichocarpa HOM05D006520 ORTHO05D008405 6.1e-149 531.2 352 78.4
Cpa.g.sc1133.1 Carica papaya HOM05D006520 ORTHO05D008405 1.4e-148 530.0 337 79.8
Solyc12g005200.3 Solanum lycopersicum HOM05D006520 ORTHO05D008405 1.4e-148 530.0 351 78.9
Atru.chr2.3238 Acer truncatum HOM05D006520 ORTHO05D008405 2.3e-148 529.3 350 76.9
CANSAT35G1182 Cannabis sativa HOM05D006520 ORTHO05D008405 2.3e-148 529.3 350 77.7
Nn3g21422 Nelumbo nucifera HOM05D006520 ORTHO05D008405 2.3e-148 529.3 357 76.8
PGSC0003DMG400001100 Solanum tuberosum HOM05D006520 ORTHO05D008405 4.0e-148 528.5 351 78.9
DCAR_010030 Daucus carota HOM05D006520 ORTHO05D008405 6.7e-148 527.7 350 77.1
ECA246G0715 Erigeron canadensis HOM05D006520 ORTHO05D008405 6.7e-148 527.7 351 79.2
FAN21G1190 Fragaria x ananassa HOM05D006520 ORTHO05D008405 6.7e-148 527.7 355 76.3
CAN.G315.8 Capsicum annuum HOM05D006520 ORTHO05D008405 1.2e-147 526.9 351 77.5
Sopen12g001190 Solanum pennellii HOM05D006520 ORTHO05D008405 1.2e-147 526.9 351 78.3
Sc16g0006360 Simmondsia chinensis HOM05D006520 ORTHO05D008405 2.0e-147 526.2 352 77.6
Aqoxy5G00708 Aquilegia oxysepala HOM05D006520 ORTHO05D008405 3.3e-147 525.4 342 78.4
Ah.06g182970 Amaranthus hybridus HOM05D006520 ORTHO05D008405 7.5e-147 524.2 338 78.4
PGR083G2407 Punica granatum HOM05D006520 ORTHO05D008405 9.7e-147 523.9 333 79.9
Prupe.4G205700 Prunus persica HOM05D006520 ORTHO05D008405 2.2e-146 522.7 355 76.1
THA.LOC104817880 Tarenaya hassleriana HOM05D006520 ORTHO05D008405 2.2e-146 522.7 362 74.6
COL.COLO4_09604 Corchorus olitorius HOM05D006520 ORTHO05D008405 2.8e-146 522.3 335 78.8
Gorai.002G084200 Gossypium raimondii HOM05D006520 ORTHO05D008405 2.8e-146 522.3 332 79.2
Gohir.A01G076200 Gossypium hirsutum HOM05D006520 ORTHO05D008405 3.7e-146 521.9 332 79.2
CsaV3_3G023150 Cucumis sativus L. HOM05D006520 ORTHO05D008405 1.4e-145 520.0 336 79.2
Peaxi162Scf01097g00110 Petunia axillaris HOM05D006520 ORTHO05D008405 4.1e-145 518.5 351 77.5
HanXRQChr08g0234071 Helianthus annuus HOM05D006520 ORTHO05D008405 2.0e-144 516.2 339 78.8
SGA_v2.0_scaffold258G45796 Striga asiatica HOM05D006520 ORTHO05D008405 3.5e-144 515.4 349 77.4
AL1G58660 Arabidopsis lyrata HOM05D006520 ORTHO05D008405 2.2e-143 512.7 345 75.9
MELO3C018098.2 Cucumis melo HOM05D006520 ORTHO05D008405 2.9e-143 512.3 336 78.0
Thhalv10011599m.g Eutrema salsugineum HOM05D006520 ORTHO05D008405 6.5e-143 511.1 362 74.3
Sabra11G0121700 Salix brachista HOM05D006520 ORTHO05D008405 8.5e-143 510.8 385 71.9
AT1G50940 Arabidopsis thaliana HOM05D006520 ORTHO05D008405 1.1e-142 510.4 343 75.8
Lsat_1_v5_gn_7_65980 Lactuca sativa HOM05D006520 ORTHO05D008405 1.5e-142 510.0 355 75.8
Sabra11G0121400 Salix brachista HOM05D006520 ORTHO05D008405 2.5e-142 509.2 372 73.4
Glyma.06G270300 Glycine max HOM05D006520 ORTHO05D008405 9.4e-142 507.3 330 79.7
Carub.0001s3988 Capsella rubella HOM05D006520 ORTHO05D008405 8.0e-141 504.2 345 75.4
PSO210G5695 Papaver somniferum HOM05D006520 ORTHO05D008405 5.2e-140 501.5 341 76.2
PSO832G0135 Papaver somniferum HOM05D006520 ORTHO05D008405 5.2e-140 501.5 341 76.2
ClCG05G014620 Citrullus lanatus HOM05D006520 ORTHO05D008405 6.8e-140 501.1 336 77.4
Lj3g0004956 Lotus japonicus HOM05D006520 ORTHO05D008405 1.2e-139 500.4 333 77.5
CARHR040980 Cardamine hirsuta HOM05D006520 ORTHO05D008405 7.5e-139 497.7 343 74.9
Aa31LG10G3340 Aethionema arabicum HOM05D006520 ORTHO05D008405 9.8e-139 497.3 357 72.0
A08p03100 Brassica napus HOM05D006520 ORTHO05D008405 3.7e-138 495.4 332 76.5
Medtr4g080790 Medicago truncatula HOM05D006520 ORTHO05D008405 8.3e-138 494.2 337 76.9
C03p89710 Brassica napus HOM05D006520 ORTHO05D008405 1.1e-137 493.8 343 74.9
BcaC01g01246 Brassica carinata HOM05D006520 ORTHO05D008405 1.4e-137 493.4 362 72.1
BolC3t21294H Brassica oleracea HOM05D006520 ORTHO05D008405 1.4e-137 493.4 362 72.1
BraA08t32341Z Brassica rapa HOM05D006520 ORTHO05D008405 1.4e-137 493.4 332 76.2
Lalb_Chr03g0030081 Lupinus albus HOM05D006520 ORTHO05D008405 3.1e-137 492.3 359 73.5
BcaB04g17242 Brassica carinata HOM05D006520 ORTHO05D008405 2.0e-136 489.6 344 74.4
Actinidia09928 Actinidia chinensis HOM05D006520 ORTHO05D008405 2.7e-136 489.2 269 91.8
EL10Ac4g07934 Beta vulgaris HOM05D006520 ORTHO05D008405 4.5e-136 488.4 352 74.4
Sp1g37680 Schrenkiella parvula HOM05D006520 ORTHO05D008405 4.5e-136 488.4 344 75.0
ATR0706G183 Amborella trichopoda HOM05D006520 ORTHO05D008405 5.9e-136 488.0 332 74.1
arahy.Tifrunner.gnm1.ann1.45MNV2 Arachis hypogaea HOM05D006520 ORTHO05D008405 5.9e-136 488.0 356 73.3
Ca_18859_v3 Cicer arietinum L. HOM05D006520 ORTHO05D008405 1.3e-135 486.9 338 78.1
VMungo1127G1053 Vigna mungo HOM05D006520 ORTHO05D008405 4.2e-134 481.9 330 77.6
Phvul.011G139475 Phaseolus vulgaris HOM05D006520 ORTHO05D008405 1.2e-133 480.3 330 76.4
HPP92_026253 Vanilla planifolia HOM05D006520 ORTHO05D008405 1.0e-132 477.2 338 72.5
Psat7g163040 Pisum sativum HOM05D006520 ORTHO05D008405 1.2e-128 463.8 336 74.1
TPR.G25908 Trifolium pratense HOM05D006520 ORTHO05D008405 3.5e-128 462.2 298 80.9
Os03g0835400 Oryza sativa ssp. japonica HOM05D006520 ORTHO05D008405 1.0e-127 460.7 333 71.2
Manes.15G075200 Manihot esculenta HOM05D006520 ORTHO05D008405 4.3e-126 455.3 269 84.8
Mapoly0055s0094 Marchantia polymorpha HOM05D006520 ORTHO05D008405 7.8e-112 407.9 347 60.8
SHI31861 Sapria himalayana HOM05D006520 ORTHO05D008405 1.3e-111 407.1 355 63.7
Gohir.D01G063700 Gossypium hirsutum HOM05D006520 ORTHO05D008405 1.1e-108 397.5 266 74.8
Pp3c15_18640 Physcomitrium patens HOM05D006520 ORTHO05D008405 2.3e-108 396.4 331 60.7
SMO169G0265 Selaginella moellendorffii HOM05D006520 ORTHO05D008405 1.9e-102 376.7 333 61.3
SalBow6G5624 Salvia bowleyana HOM05D006520 ORTHO05D008405 1.9e-94 350.1 260 71.2
CiPaw.11G185700 Carya illinoinensis HOM05D006520 ORTHO05D008405 1.2e-93 347.4 284 68.3
Zm00001eb063680 Zea mays HOM05D006520 ORTHO05D008405 6.2e-77 292.0 242 61.2
Cre16.g687950 Chlamydomonas reinhardtii HOM05D006520 ORTHO05D008405 2.4e-76 290.0 351 46.7
TAR362G0323 Trochodendron aralioides HOM05D000062 ORTHO05D000043 2.4e-76 290.0 272 59.9
CDE01G0592 Ceratophyllum demersum HOM05D006520 ORTHO05D008405 3.2e-73 279.6 228 68.9
Haze_27296 Corylus avellana HOM05D006520 ORTHO05D008405 5.1e-71 272.3 327 45.9
unitig_62.g23270 Utricularia gibba HOM05D006520 ORTHO05D008405 2.5e-65 253.4 193 68.4
CsaV3_3G025190 Cucumis sativus L. HOM05D006520 ORTHO05D008405 4.2e-65 252.7 194 67.5
PRCOL_00001901 Prasinoderma coloniale HOM05D006520 ORTHO05D008405 5.5e-65 252.3 305 47.9
Cfa027367 Carpinus fangiana HOM05D006520 ORTHO05D008405 2.7e-64 250.0 331 45.9
CsaV3_3G025180 Cucumis sativus L. HOM05D006520 ORTHO05D008405 2.7e-64 250.0 155 83.9
arahy.Tifrunner.gnm1.ann1.3QT6IB Arachis hypogaea HOM05D006520 ORTHO05D008405 1.5e-62 244.2 356 46.6
CsaV3_UNG094710 Cucumis sativus L. HOM05D006520 ORTHO05D008405 2.1e-56 223.8 186 67.7
AagrBONN_evm.TU.Sc2ySwM_228.3593 Anthoceros agrestis HOM05D006520 ORTHO05D008405 3.2e-49 199.9 188 55.9
Glyma.12G134400 Glycine max HOM05D006520 ORTHO05D008405 5.1e-47 192.6 140 70.7
SEGI_24363 Sequoiadendron giganteum HOM05D006520 ORTHO05D008405 1.1e-44 184.9 145 65.5
CsaV3_UNG094720 Cucumis sativus L. HOM05D006520 ORTHO05D008405 2.1e-40 170.6 114 73.7
Haze_27029 Corylus avellana HOM05D006520 ORTHO05D008405 1.4e-39 167.9 265 41.5
SEGI_31254 Sequoiadendron giganteum HOM05D006520 ORTHO05D008405 1.1e-38 164.9 91 91.2
Actinidia27215 Actinidia chinensis HOM05D006520 ORTHO05D008405 8.0e-32 142.1 133 64.7
Pp3c15_18800 Physcomitrium patens HOM05D006520 ORTHO05D008405 5.3e-28 129.4 136 53.7
unitig_62.g23271 Utricularia gibba HOM05D006520 ORTHO05D008405 5.5e-25 119.4 66 90.9
CDE01G0120 Ceratophyllum demersum HOM05D006520 ORTHO05D008405 7.5e-22 109.0 57 94.7
SEGI_23300 Sequoiadendron giganteum HOM05D006520 ORTHO05D008405 7.0e-20 102.4 88 58.0
EL10Ac4g08085 Beta vulgaris HOM05D006520 ORTHO05D090166 1.3e-13 81.6 43 95.3
MD11G1224100 Malus domestica HOM05D006520 ORTHO05D008405 3.7e-13 80.1 46 87.0
Zm00001eb241410 Zea mays HOM05D006520 ORTHO05D442212 1.8e-07 61.2 51 60.8


User provided reference genes

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