Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0025949 Camellia sinensis var. sinensis HOM05D007654 ORTHO05D009697 1.2e-39 166.0 83 100.0
QL12p024465 Quercus lobata HOM05D007654 ORTHO05D009697 3.0e-30 134.8 82 74.4
GSVIVG01010984001 Vitis vinifera HOM05D007654 ORTHO05D009697 5.1e-30 134.0 83 77.1
Dinv33011 Davidia involucrata HOM05D007654 ORTHO05D009697 2.0e-29 132.1 83 75.9
Manes.01G215200 Manihot esculenta HOM05D007654 ORTHO05D009697 2.6e-29 131.7 81 74.1
Cfa005999 Carpinus fangiana HOM05D007654 ORTHO05D009697 5.7e-29 130.6 81 75.3
Manes.05G066600 Manihot esculenta HOM05D007654 ORTHO05D009697 1.3e-28 129.4 80 76.2
Thecc.01G292900 Theobroma cacao HOM05D007654 ORTHO05D009697 1.3e-28 129.4 83 74.7
COL.COLO4_08007 Corchorus olitorius HOM05D000091 ORTHO05D003679 2.8e-28 128.3 83 74.7
CiPaw.07G102300 Carya illinoinensis HOM05D007654 ORTHO05D009697 6.3e-28 127.1 80 76.2
Lsat_1_v5_gn_8_54301 Lactuca sativa HOM05D007654 ORTHO05D009697 8.2e-28 126.7 81 70.4
Gohir.A12G009300 Gossypium hirsutum HOM05D007654 ORTHO05D009697 1.1e-27 126.3 83 73.5
Gohir.D12G009200 Gossypium hirsutum HOM05D007654 ORTHO05D009697 1.1e-27 126.3 83 74.7
TWI59G0903 Tripterygium wilfordii HOM05D007654 ORTHO05D009697 1.1e-27 126.3 83 72.3
Atru.chr5.1253 Acer truncatum HOM05D007654 ORTHO05D009697 1.4e-27 125.9 83 71.1
Ciclev10023123m.g Citrus clementina HOM05D007654 ORTHO05D009697 1.8e-27 125.6 83 72.3
Duzib138G0105 Durio zibethinus HOM05D007654 ORTHO05D009697 1.8e-27 125.6 81 74.1
Gorai.008G009300 Gossypium raimondii HOM05D007654 ORTHO05D009697 2.4e-27 125.2 83 73.5
Lsat_1_v5_gn_9_47321 Lactuca sativa HOM05D007654 ORTHO05D009697 5.3e-27 124.0 81 69.1
Nn3g21360 Nelumbo nucifera HOM05D007654 ORTHO05D009697 5.3e-27 124.0 78 71.8
HanXRQChr11g0350121 Helianthus annuus HOM05D007654 ORTHO05D009697 9.1e-27 123.2 80 73.8
Prupe.8G254700 Prunus persica HOM05D007654 ORTHO05D009697 9.1e-27 123.2 77 76.6
Haze_04848 Corylus avellana HOM05D007654 ORTHO05D009697 2.0e-26 122.1 110 58.2
Hma1.2p1_0209F.1_g088920 Hydrangea macrophylla HOM05D007654 ORTHO05D009697 2.0e-26 122.1 77 74.0
Cc01_g20410 Coffea canephora HOM05D007654 ORTHO05D009697 3.5e-26 121.3 83 68.7
Phvul.001G203700 Phaseolus vulgaris HOM05D007654 ORTHO05D009697 1.7e-25 119.0 81 71.6
Aqoxy2G03067 Aquilegia oxysepala HOM05D007654 ORTHO05D009697 5.0e-25 117.5 81 65.4
CANSAT25G3801 Cannabis sativa HOM05D007654 ORTHO05D009697 6.5e-25 117.1 76 73.7
Lj1g0000519 Lotus japonicus HOM05D007654 ORTHO05D009697 8.5e-25 116.7 83 68.7
Glyma.19G207800 Glycine max HOM05D007654 ORTHO05D009697 1.5e-24 115.9 81 69.1
vmacro14977 Vaccinium macrocarpon HOM05D007654 ORTHO05D009697 1.9e-24 115.5 70 80.0
TPR.G9273 Trifolium pratense HOM05D007654 ORTHO05D009697 2.5e-24 115.2 83 68.7
Glyma.03G210600 Glycine max HOM05D007654 ORTHO05D009697 3.2e-24 114.8 81 69.1
PGSC0003DMG400011382 Solanum tuberosum HOM05D007654 ORTHO05D009697 3.2e-24 114.8 80 67.5
Aa31LG10G16730 Aethionema arabicum HOM05D007654 ORTHO05D009697 7.2e-24 113.6 81 66.7
Medtr7g108290 Medicago truncatula HOM05D000091 ORTHO05D003679 7.2e-24 113.6 82 69.5
MD11G1300800 Malus domestica HOM05D007654 ORTHO05D009697 9.4e-24 113.2 71 76.1
Solyc09g074620.3 Solanum lycopersicum HOM05D007654 ORTHO05D009697 9.4e-24 113.2 80 67.5
Sopen09g029490 Solanum pennellii HOM05D007654 ORTHO05D009697 9.4e-24 113.2 80 67.5
ECA236G4373 Erigeron canadensis HOM05D007654 ORTHO05D009697 1.2e-23 112.8 74 71.6
FAN15G1923 Fragaria x ananassa HOM05D000091 ORTHO05D003679 1.6e-23 112.5 73 74.0
MD03G1278400 Malus domestica HOM05D007654 ORTHO05D009697 2.1e-23 112.1 72 75.0
arahy.Tifrunner.gnm1.ann1.4942C7 Arachis hypogaea HOM05D007654 ORTHO05D009697 2.7e-23 111.7 74 74.3
Carub.0005s2957 Capsella rubella HOM05D007654 ORTHO05D009697 2.7e-23 111.7 81 65.4
ClCG09G006300 Citrullus lanatus HOM05D007654 ORTHO05D009697 2.7e-23 111.7 75 66.7
Nitab4.5_0002006g0110 Nicotiana tabacum HOM05D007654 ORTHO05D009697 2.7e-23 111.7 79 65.8
Rhsim01G0281900 Rhododendron simsii HOM05D007654 ORTHO05D009697 2.7e-23 111.7 81 71.6
Eucgr.H01198 Eucalyptus grandis HOM05D007654 ORTHO05D009697 3.6e-23 111.3 77 67.5
Potri.014G133600 Populus trichocarpa HOM05D007654 ORTHO05D009697 4.7e-23 110.9 83 65.1
Ca_09124_v3 Cicer arietinum L. HOM05D000091 ORTHO05D003679 8.0e-23 110.2 64 78.1
FAN27G0435 Fragaria x ananassa HOM05D000091 ORTHO05D003679 8.0e-23 110.2 73 72.6
PGR119G1851 Punica granatum HOM05D007654 ORTHO05D009697 8.0e-23 110.2 79 68.4
RcHm_v2.0_Chr6g0292931 Rosa chinensis HOM05D007654 ORTHO05D009697 8.0e-23 110.2 73 72.6
MELO3C016052.2 Cucumis melo HOM05D007654 ORTHO05D009697 1.0e-22 109.8 79 64.6
Sed0025850 Sechium edule HOM05D007654 ORTHO05D009697 1.0e-22 109.8 77 66.2
CsaV3_7G028850 Cucumis sativus L. HOM05D007654 ORTHO05D009697 1.8e-22 109.0 79 63.3
TAR636G0595 Trochodendron aralioides HOM05D007654 ORTHO05D009697 1.8e-22 109.0 81 60.5
AL5G45700 Arabidopsis lyrata HOM05D007654 ORTHO05D009697 2.3e-22 108.6 81 61.7
C08p37630 Brassica napus HOM05D007654 ORTHO05D009697 4.0e-22 107.8 81 63.0
CARHR173210 Cardamine hirsuta HOM05D007654 ORTHO05D009697 6.7e-22 107.1 81 61.7
FAN24G2398 Fragaria x ananassa HOM05D000091 ORTHO05D003679 6.7e-22 107.1 73 71.2
Lalb_Chr15g0078691 Lupinus albus HOM05D007654 ORTHO05D009697 8.8e-22 106.7 72 68.1
PSO170G3373 Papaver somniferum HOM05D007654 ORTHO05D009697 8.8e-22 106.7 80 60.0
BraA09t40886Z Brassica rapa HOM05D007654 ORTHO05D009697 1.1e-21 106.3 78 62.8
Thhalv10006348m.g Eutrema salsugineum HOM05D007654 ORTHO05D009697 1.1e-21 106.3 81 61.7
AT3G62920 Arabidopsis thaliana HOM05D007654 ORTHO05D009697 1.5e-21 105.9 81 60.5
Migut.D00166 Erythranthe guttata HOM05D007654 ORTHO05D009697 1.5e-21 105.9 72 70.8
BolC8t51346H Brassica oleracea HOM05D007654 ORTHO05D009697 2.0e-21 105.5 81 63.0
A09p54770 Brassica napus HOM05D007654 ORTHO05D009697 4.4e-21 104.4 78 61.5
Hund18071 Selenicereus undatus HOM05D007654 ORTHO05D009697 4.4e-21 104.4 74 67.6
MBI18_g01968_MAGBIO Magnolia biondii HOM05D007654 ORTHO05D009697 5.7e-21 104.0 76 64.5
SalBow3G4040 Salvia bowleyana HOM05D007654 ORTHO05D009697 7.5e-21 103.6 69 68.1
AUR62034665 Chenopodium quinoa HOM05D007654 ORTHO05D009697 1.7e-20 102.4 78 62.8
Cpa.g.sc9.182 Carica papaya HOM05D007654 ORTHO05D009697 1.1e-19 99.8 65 75.4
Oeu057570.1 Olea europaea HOM05D007654 ORTHO05D009697 1.1e-19 99.8 66 69.7
unitig_0.g650 Utricularia gibba HOM05D007654 ORTHO05D009697 1.8e-19 99.0 82 59.8
Dinv19737 Davidia involucrata HOM05D007654 ORTHO05D009697 5.3e-19 97.4 55 81.8
arahy.Tifrunner.gnm1.ann1.3EGQ08 Arachis hypogaea HOM05D007654 ORTHO05D009697 7.0e-19 97.1 64 73.4
EL10Ac7g17424 Beta vulgaris HOM05D007654 ORTHO05D009697 1.2e-18 96.3 76 60.5
BcaB02g08089 Brassica carinata HOM05D007654 ORTHO05D009697 1.6e-18 95.9 78 55.1
C04p30320 Brassica napus HOM05D007654 ORTHO05D009697 1.7e-17 92.4 68 60.3
BolC4t24565H Brassica oleracea HOM05D007654 ORTHO05D009697 1.7e-17 92.4 68 60.3
FvH4_2g24970 Fragaria vesca HOM05D007654 ORTHO05D009697 1.7e-17 92.4 64 68.8
Sabra14G0099700 Salix brachista HOM05D000091 ORTHO05D003679 1.7e-17 92.4 65 69.2
Actinidia21074 Actinidia chinensis HOM05D007654 ORTHO05D009697 2.9e-17 91.7 53 81.1
Eucgr.L03487 Eucalyptus grandis HOM05D007654 ORTHO05D009697 6.5e-17 90.5 78 60.3
A04p00450 Brassica napus HOM05D007654 ORTHO05D009697 8.5e-17 90.1 81 54.3
BraA04t15764Z Brassica rapa HOM05D007654 ORTHO05D009697 8.5e-17 90.1 81 54.3
Nitab4.5_0001102g0070 Nicotiana tabacum HOM05D007654 ORTHO05D009697 2.5e-16 88.6 59 71.2
Actinidia21070 Actinidia chinensis HOM05D007654 ORTHO05D009697 3.6e-15 84.7 50 80.0
FAN20G1580 Fragaria x ananassa HOM05D007654 ORTHO05D009697 4.7e-15 84.3 67 64.2
arahy.Tifrunner.gnm1.ann1.559R1C Arachis hypogaea HOM05D007654 ORTHO05D009697 1.4e-14 82.8 51 78.4
Zm00001eb365450 Zea mays HOM05D007654 ORTHO05D009697 2.3e-14 82.0 57 66.7
AUR62008575 Chenopodium quinoa HOM05D000096 ORTHO05D000045 1.5e-13 79.3 61 62.3
vmacro14982 Vaccinium macrocarpon HOM05D007654 ORTHO05D009697 2.6e-13 78.6 48 79.2
AUR62026015 Chenopodium quinoa HOM05D007595 ORTHO05D009570 7.5e-13 77.0 61 59.0
Lsat_1_v5_gn_0_9401 Lactuca sativa HOM05D007654 ORTHO05D009697 4.8e-12 74.3 57 56.1
Os05g0371500 Oryza sativa ssp. japonica HOM05D007654 ORTHO05D009697 9.1e-11 70.1 52 59.6
SEGI_14019 Sequoiadendron giganteum HOM05D007654 ORTHO05D009697 2.7e-10 68.6 46 65.2
Mapoly0101s0010 Marchantia polymorpha HOM05D007654 ORTHO05D009697 1.2e-07 59.7 58 51.7
AagrBONN_evm.TU.Sc2ySwM_344.4968 Anthoceros agrestis HOM05D007654 ORTHO05D009697 3.6e-07 58.2 47 53.2


User provided reference genes

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